CX297751
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX297751 vs. ExPASy Swiss-Prot
Match: H31_ENCCU (Histone H3.1 OS=Encephalitozoon cuniculi GN=HHT1 PE=3 SV=3) HSP 1 Score: 158.303 bits (399), Expect = 2.538e-38 Identity = 80/135 (59.26%), Postives = 105/135 (77.78%), Query Frame = 2 Query: 44 MARTKQTARKSTGGKAPRKQLASKAARKA-APSTGGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKS--DLRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLR 439 MARTKQ+ARK+TGGKAPRKQL++K+ARK +P++ K RY+PG+VAL+EIRRYQKST+ LIR+LPFQR R + ++ + D+RFQ A+ ++QE++E YLV LFED LCA HAKRVT+ KDI L +LR Sbjct: 1 MARTKQSARKTTGGKAPRKQLSAKSARKGVSPASSAGAKKSRYRPGSVALKEIRRYQKSTDFLIRRLPFQRACRSVVKECSNATDIRFQGPALASIQEALEVYLVGLFEDAMLCAYHAKRVTVFPKDISLVLKLR 135
BLAST of CX297751 vs. ExPASy Swiss-Prot
Match: H3L3_LILLO (Histone H3-like 3 OS=Lilium longiflorum GN=leH3 PE=2 SV=3) HSP 1 Score: 149.828 bits (377), Expect = 9.025e-36 Identity = 87/156 (55.77%), Postives = 101/156 (64.74%), Query Frame = 2 Query: 44 MARTKQTARKSTGGKAPRKQLASKAARKAAPST-----------------------GGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRG 442 MAR K AR STGGKAPRKQLA KA RKAAP T GVK+PHRY+PG + LREIR+Y+K+ I KLPF RLVR+I Q+ K+ LRFQS+A+ A +E EAYLV LFED AIHAKRVT+ KDIQLAR + G Sbjct: 1 MARMKLNARMSTGGKAPRKQLAYKAVRKAAPPTIGVKLPNSYRPGDQTVCKPAPPTDGVKEPHRYRPGKMGLREIRKYKKNARFFISKLPFHRLVRKITQNLKAHLRFQSTAMPAPEEVSEAYLVKLFED----AIHAKRVTLVPKDIQLARCIGG 152
BLAST of CX297751 vs. ExPASy Swiss-Prot
Match: H3_ENTHI (Histone H3 OS=Entamoeba histolytica GN=H3 PE=3 SV=2) HSP 1 Score: 146.362 bits (368), Expect = 9.979e-35 Identity = 85/134 (63.43%), Postives = 95/134 (70.90%), Query Frame = 2 Query: 44 MARTK-QTARKSTGGKAPRKQLASKAARKAAPSTGGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRG 442 MARTK R S K +A KAA+K KK R PG VAL EI+ Q+STELL+RK PFQ LVREIAQ KSDLRFQS+AI ALQE+ EAYLV LFEDTNLCAIHAKR+TI KD+QLARR+RG Sbjct: 1 MARTKGHIERPSNKSAKAVKNVAFKAAKKMLSKDSTKKK--RAHPGAVALTEIKVLQRSTELLLRKAPFQALVREIAQVSKSDLRFQSAAISALQEAAEAYLVGLFEDTNLCAIHAKRITIMPKDMQLARRIRG 132
BLAST of CX297751 vs. ExPASy Swiss-Prot
Match: H3_LEIIN (Histone H3 OS=Leishmania infantum PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 1.882e-33 Identity = 80/134 (59.70%), Postives = 98/134 (73.13%), Query Frame = 2 Query: 44 MARTKQTARKSTGGKAPRKQLASKAARKAAPSTGGVKKPHR-YKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRG 442 M+RTK+TAR ++ + SK ++KA GVK+ HR ++PGT A+REIR++QKST LLI+ PFQRLVR + + K LRFQSSAI ALQE+ EAY+VSL DTNL IHAKRVTIQ KDIQLA RLRG Sbjct: 1 MSRTKETARA-------KRTITSKKSKKAPSGASGVKRSHRRWRPGTCAIREIRKFQKSTSLLIQCAPFQRLVRGVERQ-KEGLRFQSSAIMALQEATEAYIVSLMADTNLACIHAKRVTIQPKDIQLALRLRG 126
BLAST of CX297751 vs. ExPASy Swiss-Prot
Match: CENPA_NEUCR (Histone H3-like centromeric protein cse-4 OS=Neurospora crassa GN=cse-4 PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 7.907e-32 Identity = 73/140 (52.14%), Postives = 97/140 (69.29%), Query Frame = 2 Query: 44 MARTKQTARKSTGGKAPRKQLASKAARKAAPSTGGVKKPH----RYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK---SDLRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRG 442 + ++K ++K+ P+ + +A+ G P RY+PGT+AL+EIR YQ++T+LL+ KLPF RLVREIA F+ ++R+QS AI ALQE+ EA+LV LFEDTNLCAIHAKRVTI KDIQLARR+RG Sbjct: 8 VTKSKAVSKKAAAVPTPKATPPGRRKSRASSVQPGDPVPQGKKRRYRPGTLALKEIRNYQRTTDLLVAKLPFARLVREIAMQFRPMDEEMRWQSQAILALQEAAEAFLVHLFEDTNLCAIHAKRVTIMQKDIQLARRIRG 147
BLAST of CX297751 vs. ExPASy Swiss-Prot
Match: CENPA_CANAL (Histone H3-like centromeric protein CSE4 OS=Candida albicans GN=CSE4 PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 6.693e-31 Identity = 73/101 (72.28%), Postives = 84/101 (83.17%), Query Frame = 2 Query: 149 VKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSD---LRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRG 442 VKK RY+PGT ALREIR+YQKST+LLIRKLPF RLVREI+ DF LR+QS+AI ALQE+ E++L+ L EDTNLCAIHAKRVTI KDIQLARR+RG Sbjct: 108 VKK--RYRPGTKALREIRQYQKSTDLLIRKLPFARLVREISLDFVGPSYGLRWQSNAILALQEASESFLIHLLEDTNLCAIHAKRVTIMQKDIQLARRIRG 206
BLAST of CX297751 vs. ExPASy Swiss-Prot
Match: H33_HORVU (Histone H3.3 (Fragment) OS=Hordeum vulgare PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 2.544e-30 Identity = 67/77 (87.01%), Postives = 71/77 (92.21%), Query Frame = 2 Query: 212 KSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRG 442 KSTELLIRKLPFQRLVREIAQDFK+DLRFQS A+ ALQE+ EAYLV LFEDTNLCAIHAKRVTI KDIQLARR+RG Sbjct: 1 KSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 77
BLAST of CX297751 vs. ExPASy Swiss-Prot
Match: CENPA_PICFA (Histone H3-like centromeric protein CSE4 OS=Pichia farinosa GN=CSE4 PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 2.544e-30 Identity = 67/96 (69.79%), Postives = 82/96 (85.42%), Query Frame = 2 Query: 164 RYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKS---DLRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRG 442 RY+PGT ALREIRRYQ+S+ELLIRKLPF RLV+E+A+++ +R+QS+A+ ALQE+ EA+LV L EDTNLCAIHAKRVTI KDIQLARR+RG Sbjct: 61 RYRPGTKALREIRRYQRSSELLIRKLPFARLVKEVAENYIGADYGIRWQSNAVLALQEACEAFLVHLLEDTNLCAIHAKRVTIMQKDIQLARRIRG 156
BLAST of CX297751 vs. ExPASy Swiss-Prot
Match: H3L_ENCCU (Histone H3-like protein OS=Encephalitozoon cuniculi GN=ECU09_0450 PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 4.339e-30 Identity = 71/135 (52.59%), Postives = 98/135 (72.59%), Query Frame = 2 Query: 44 MARTKQTARKSTGGKAPRKQLASKAARKAAPSTG---GVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLR 439 M+RTKQTA K+ GGKAPRK +++K+ PS+G + K R+K G +AL+EIR+YQKST+LLIRK PFQR+VR++ + + +RFQ+SAI A QE+VE +L SL ED C +HAKRVT+ KDI L +++ Sbjct: 1 MSRTKQTASKALGGKAPRKGISAKSI----PSSGCSPAMPKRTRFKAGALALKEIRKYQKSTDLLIRKRPFQRMVRDLCKG-REGVRFQASAIVAFQEAVENFLTSLMEDAYRCVLHAKRVTLMPKDICLVYKIK 130
BLAST of CX297751 vs. ExPASy Swiss-Prot
Match: CENPA_SCHPO (Histone H3-like centromeric protein cnp1 OS=Schizosaccharomyces pombe GN=cnp1 PE=1 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 7.400e-30 Identity = 64/99 (64.65%), Postives = 83/99 (83.84%), Query Frame = 2 Query: 164 RYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSD------LRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRG 442 RY+PGT ALREIR+YQ+ST+LLI++LPF R+VREI+ +F ++ LR+QS+A+ LQE+ EA+LV LFEDTNLCAIHAKRVTI +D+QLARR+RG Sbjct: 21 RYRPGTTALREIRKYQRSTDLLIQRLPFSRIVREISSEFVANFSTDVGLRWQSTALQCLQEAAEAFLVHLFEDTNLCAIHAKRVTIMQRDMQLARRIRG 119 The following BLAST results are available for this feature:
BLAST of CX297751 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 212
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Sequences
The
following sequences are available for this feature:
EST sequence >CX297751 ID=CX297751; Name=CX297751; organism=Citrus clementina; type=EST; length=585bpback to top |