CX297755

Overview
NameCX297755
Unique NameCX297755
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length539
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX297755 vs. ExPASy Swiss-Prot
Match: GBLP_ORENI (Guanine nucleotide-binding protein subunit beta-2-like 1 OS=Oreochromis niloticus GN=gnb2l1 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 3.622e-30
Identity = 64/113 (56.64%), Postives = 77/113 (68.14%), Query Frame = 1
Query:    7 GEDGVILLWDLAEGKRLYSLDAGAVIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXXNIYCTSLNWSADGSTLFSGYTDGVIRVWGI 345
            G+DG  +LWDL EGK LY+LD+G VI+ALCFSPNRYWLCAAT  SIKIWDLE K IV++L+ ++                      CTSL WSADG TLF+GYTD +IRVW +
Sbjct:  211 GKDGQAMLWDLNEGKHLYTLDSGDVINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELRQEVISTNSKAEPP-----------QCTSLAWSADGQTLFAGYTDNLIRVWQV 312          
BLAST of CX297755 vs. ExPASy Swiss-Prot
Match: GBLP_MOUSE (Guanine nucleotide-binding protein subunit beta-2-like 1 OS=Mus musculus GN=Gnb2l1 PE=1 SV=3)

HSP 1 Score: 130.954 bits (328), Expect = 3.622e-30
Identity = 63/113 (55.75%), Postives = 76/113 (67.26%), Query Frame = 1
Query:    7 GEDGVILLWDLAEGKRLYSLDAGAVIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXXNIYCTSLNWSADGSTLFSGYTDGVIRVWGI 345
            G+DG  +LWDL EGK LY+LD G +I+ALCFSPNRYWLCAAT  SIKIWDLE K IV++LK ++                      CTSL WSADG TLF+GYTD ++RVW +
Sbjct:  211 GKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPP-----------QCTSLAWSADGQTLFAGYTDNLVRVWQV 312          
BLAST of CX297755 vs. ExPASy Swiss-Prot
Match: GBLP_MACFA (Guanine nucleotide-binding protein subunit beta-2-like 1 OS=Macaca fascicularis GN=GNB2L1 PE=2 SV=3)

HSP 1 Score: 130.954 bits (328), Expect = 3.622e-30
Identity = 63/113 (55.75%), Postives = 76/113 (67.26%), Query Frame = 1
Query:    7 GEDGVILLWDLAEGKRLYSLDAGAVIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXXNIYCTSLNWSADGSTLFSGYTDGVIRVWGI 345
            G+DG  +LWDL EGK LY+LD G +I+ALCFSPNRYWLCAAT  SIKIWDLE K IV++LK ++                      CTSL WSADG TLF+GYTD ++RVW +
Sbjct:  211 GKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPP-----------QCTSLAWSADGQTLFAGYTDNLVRVWQV 312          
BLAST of CX297755 vs. ExPASy Swiss-Prot
Match: GBLP_HUMAN (Guanine nucleotide-binding protein subunit beta-2-like 1 OS=Homo sapiens GN=GNB2L1 PE=1 SV=3)

HSP 1 Score: 130.954 bits (328), Expect = 3.622e-30
Identity = 63/113 (55.75%), Postives = 76/113 (67.26%), Query Frame = 1
Query:    7 GEDGVILLWDLAEGKRLYSLDAGAVIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXXNIYCTSLNWSADGSTLFSGYTDGVIRVWGI 345
            G+DG  +LWDL EGK LY+LD G +I+ALCFSPNRYWLCAAT  SIKIWDLE K IV++LK ++                      CTSL WSADG TLF+GYTD ++RVW +
Sbjct:  211 GKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPP-----------QCTSLAWSADGQTLFAGYTDNLVRVWQV 312          
BLAST of CX297755 vs. ExPASy Swiss-Prot
Match: GBLP_DANRE (Guanine nucleotide-binding protein subunit beta-2-like 1 OS=Danio rerio GN=gnb2l1 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 3.622e-30
Identity = 64/113 (56.64%), Postives = 75/113 (66.37%), Query Frame = 1
Query:    7 GEDGVILLWDLAEGKRLYSLDAGAVIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXXNIYCTSLNWSADGSTLFSGYTDGVIRVWGI 345
            G+DG  +LWDL EGK LY+LD G  I+ALCFSPNRYWLCAAT  SIKIWDLE K IV++L+ D+                      CTSL WSADG TLF+GYTD +IRVW +
Sbjct:  211 GKDGQAMLWDLNEGKHLYTLDGGDTINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELRQDIITTNSKAEPP-----------QCTSLAWSADGQTLFAGYTDNLIRVWQV 312          
BLAST of CX297755 vs. ExPASy Swiss-Prot
Match: GBLP_CHICK (Guanine nucleotide-binding protein subunit beta-2-like 1 OS=Gallus gallus GN=GNB2L1 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 3.622e-30
Identity = 63/113 (55.75%), Postives = 76/113 (67.26%), Query Frame = 1
Query:    7 GEDGVILLWDLAEGKRLYSLDAGAVIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXXNIYCTSLNWSADGSTLFSGYTDGVIRVWGI 345
            G+DG  +LWDL EGK LY+LD G +I+ALCFSPNRYWLCAAT  SIKIWDLE K IV++LK ++                      CTSL WSADG TLF+GYTD ++RVW +
Sbjct:  211 GKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPP-----------QCTSLAWSADGQTLFAGYTDNLVRVWQV 312          
BLAST of CX297755 vs. ExPASy Swiss-Prot
Match: GBLP_BOVIN (Guanine nucleotide-binding protein subunit beta-2-like 1 OS=Bos taurus GN=GNB2L1 PE=2 SV=3)

HSP 1 Score: 130.954 bits (328), Expect = 3.622e-30
Identity = 63/113 (55.75%), Postives = 76/113 (67.26%), Query Frame = 1
Query:    7 GEDGVILLWDLAEGKRLYSLDAGAVIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXXNIYCTSLNWSADGSTLFSGYTDGVIRVWGI 345
            G+DG  +LWDL EGK LY+LD G +I+ALCFSPNRYWLCAAT  SIKIWDLE K IV++LK ++                      CTSL WSADG TLF+GYTD ++RVW +
Sbjct:  211 GKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPP-----------QCTSLAWSADGQTLFAGYTDNLVRVWQV 312          
BLAST of CX297755 vs. ExPASy Swiss-Prot
Match: GBLP_HYDAT (Guanine nucleotide-binding protein subunit beta-like protein OS=Hydra attenuata GN=RACK1 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 1.797e-29
Identity = 64/115 (55.65%), Postives = 75/115 (65.22%), Query Frame = 1
Query:    7 GEDGVILLWDLAEGKRLYSLDAGAVIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXXNIYCTSLNWSADGSTLFSGYTDGVIRVWGIGR 351
            G+DG  +LWDL EGK LY+LD G VI+ALCFSPNRYWLCAAT   IKIWDLE KS+V++LK  +                      C SL WSADG TLF+GYTD +IRVW + R
Sbjct:  211 GKDGNAMLWDLNEGKHLYTLDGGNVINALCFSPNRYWLCAATGPMIKIWDLEMKSVVDELKPGVIGISTKSRAAD-----------CISLAWSADGQTLFAGYTDNLIRVWQVTR 314          
BLAST of CX297755 vs. ExPASy Swiss-Prot
Match: GBLP_NEUCR (Guanine nucleotide-binding protein subunit beta-like protein OS=Neurospora crassa GN=cpc-2 PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.424e-26
Identity = 60/113 (53.10%), Postives = 70/113 (61.95%), Query Frame = 1
Query:    7 GEDGVILLWDLAEGKRLYSLDAGAVIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXXNIYCTSLNWSADGSTLFSGYTDGVIRVWGI 345
            G+DG  +LWDL E K LYSL+A   IHAL FSPNRYWLCAAT  SI I+DLE KS V++LK +                       C SL WSADG TLF+GYTD +IR WG+
Sbjct:  211 GKDGTTMLWDLNESKHLYSLNANDEIHALVFSPNRYWLCAATSSSIIIFDLEKKSKVDELKPEFQNIGKKSREPE-----------CVSLAWSADGQTLFAGYTDNIIRAWGV 312          
BLAST of CX297755 vs. ExPASy Swiss-Prot
Match: GBLP_BIOGL (Guanine nucleotide-binding protein subunit beta-2-like 1 OS=Biomphalaria glabrata PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.429e-26
Identity = 60/114 (52.63%), Postives = 73/114 (64.04%), Query Frame = 1
Query:    7 GEDGVILLWDLAEGKRLYSLD-AGAVIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXXNIYCTSLNWSADGSTLFSGYTDGVIRVWGI 345
            G+D   +LWDL EGK LY+LD AG  I+ALCFSPNRYWLC A+  SIKIWDLE K +V++LK ++                      C SL WSADG TLF+GYTD +IRVW +
Sbjct:  211 GKDSQAMLWDLNEGKHLYTLDGAGDTINALCFSPNRYWLCVASGPSIKIWDLEGKVVVDELKPEVMGTTSKAPT-------------CLSLAWSADGQTLFAGYTDKLIRVWQV 311          
The following BLAST results are available for this feature:
BLAST of CX297755 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
GBLP_ORENI3.622e-3056.64Guanine nucleotide-binding protein subunit beta-2-... [more]
GBLP_MOUSE3.622e-3055.75Guanine nucleotide-binding protein subunit beta-2-... [more]
GBLP_MACFA3.622e-3055.75Guanine nucleotide-binding protein subunit beta-2-... [more]
GBLP_HUMAN3.622e-3055.75Guanine nucleotide-binding protein subunit beta-2-... [more]
GBLP_DANRE3.622e-3056.64Guanine nucleotide-binding protein subunit beta-2-... [more]
GBLP_CHICK3.622e-3055.75Guanine nucleotide-binding protein subunit beta-2-... [more]
GBLP_BOVIN3.622e-3055.75Guanine nucleotide-binding protein subunit beta-2-... [more]
GBLP_HYDAT1.797e-2955.65Guanine nucleotide-binding protein subunit beta-li... [more]
GBLP_NEUCR1.424e-2653.10Guanine nucleotide-binding protein subunit beta-li... [more]
GBLP_BIOGL2.429e-2652.63Guanine nucleotide-binding protein subunit beta-2-... [more]

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Properties
Property NameValue
Genbank descriptionC06004H06SK RindPdig24 Citrus clementina cDNA clone C06004H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX297755 ID=CX297755; Name=CX297755; organism=Citrus clementina; type=EST; length=539bp
GGCCGAGGGGAAGATGGTGTGATTCTGTTGTGGGATTTGGCTGAGGGAAA
AAGACTCTACTCGCTCGACGCTGGTGCTGTCATTCACGCGCTCTGCTTCA
GTCCTAATAGGTATTGGTTGTGTGCGGCGACTGAGCAGAGTATAAAGATC
TGGGATTTGGAGAGCAAGAGCATTGTCGAGGATCTTAAGGTTGATCTTAA
GACCGAGGCCGAGAAATCTGAGGCCACCACCGCCACCACCACCATAAAAA
AGAAGAACATTTACTGCACAAGCTTGAACTGGAGTGCTGATGGAAGCACC
TTGTTCAGTGGTTATACAGATGGTGTGATCAGAGTCTGGGGTATTGGCCG
TTATTGAAAACTGCTTGAGTAATTGCAAACTGCTGTTCTTTTTCGATTAC
AAACTAGTTTCTCGACTTTGTAGGCAGTTTCAGACCTATTTAAGATTTAA
GATTTTGTTCAAAATGTTTTTAAGGATATTTTGTTCTCTTTATTTGGATC
TTATATGGCTTTGAGGCCTCTGCTGTTTTAAAAAAAAAA
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