CX297760

Overview
NameCX297760
Unique NameCX297760
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX297760 vs. ExPASy Swiss-Prot
Match: PYK1_DICDI (Dual specificity protein kinase pyk1 OS=Dictyostelium discoideum GN=splA PE=1 SV=3)

HSP 1 Score: 70.0922 bits (170), Expect = 1.260e-11
Identity = 39/111 (35.14%), Postives = 65/111 (58.56%), Query Frame = 2
Query:  125 RKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLD-------------EDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT 418
            R ++AL  A+G+ YLH    P I+HRD+ + N+LLD             +D +  + DFGL++L  + + +  TQ  G + ++APE      +SE++DV+ YG++L EL+T
Sbjct: 2218 RLKLALDIAKGMNYLHGW-TPPILHRDLSSRNILLDHNIDPKNPVVSSRQDIKCKISDFGLSRL-KMEQASQMTQSVGCIPYMAPEVFKGDSNSEKSDVYSYGMVLFELLT 2326          
BLAST of CX297760 vs. ExPASy Swiss-Prot
Match: M313A_XENLA (Mitogen-activated protein kinase kinase kinase 13-A OS=Xenopus laevis GN=map3k13-A PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.260e-11
Identity = 45/141 (31.91%), Postives = 73/141 (51.77%), Query Frame = 2
Query:    8 GFCTTPTERLLVYPFMQNLSVAYRLREIKPGEP--VLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQ 424
            G CT      L+  +  +  +   LR  +   P  ++DW        G A G+ YLH H   KIIHRD+K+ NVL+       + DFG +K +  + T ++    GT+  +APE +     SE+ D++ +G++L EL+TG+
Sbjct:  222 GVCTQAPCYCLIMEYCAHGQLYEVLRAGRKVSPRLLVDWSN------GIASGMNYLHLH---KIIHRDLKSPNVLVTHTDTVKISDFGTSKELSDKSTKMS--FAGTVAWMAPEVIRNEPVSEKVDIWSFGVLLWELLTGE 351          
BLAST of CX297760 vs. ExPASy Swiss-Prot
Match: OXSR1_PONAB (Serine/threonine-protein kinase OSR1 OS=Pongo abelii GN=OXSR1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.645e-11
Identity = 53/183 (28.96%), Postives = 84/183 (45.90%), Query Frame = 2
Query:  107 VLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV----DVRKTNVTTQVRGTMGHIAPEYLSTGKSSE-RTDVFGYGIMLLELVTGQRAIDFSRXXXXXXXXXXXXXXXXXREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 640
            VLD  T   +      GLEYLH++     IHRDVKA N+LL ED    + DFG++  +    D+ +  V     GT   +APE +   +  + + D++ +GI  +EL TG  A  + +                  E     + D+ + K Y     ++  ++  LC Q  PE RP  +E++R
Sbjct:  117 VLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATG--AAPYHKYPPMKVLMLTLQNDPPSLE---TGVQDKEMLKKYG----KSFRKMISLCLQKDPEKRPTAAELLR 287          
BLAST of CX297760 vs. ExPASy Swiss-Prot
Match: OXSR1_MOUSE (Serine/threonine-protein kinase OSR1 OS=Mus musculus GN=Oxsr1 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.645e-11
Identity = 53/183 (28.96%), Postives = 84/183 (45.90%), Query Frame = 2
Query:  107 VLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV----DVRKTNVTTQVRGTMGHIAPEYLSTGKSSE-RTDVFGYGIMLLELVTGQRAIDFSRXXXXXXXXXXXXXXXXXREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 640
            VLD  T   +      GLEYLH++     IHRDVKA N+LL ED    + DFG++  +    D+ +  V     GT   +APE +   +  + + D++ +GI  +EL TG  A  + +                  E     + D+ + K Y     ++  ++  LC Q  PE RP  +E++R
Sbjct:  117 VLDEPTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATG--AAPYHKYPPMKVLMLTLQNDPPSLE---TGVQDKEMLKKYG----KSFRKMISLCLQKDPEKRPTAAELLR 287          
BLAST of CX297760 vs. ExPASy Swiss-Prot
Match: OXSR1_HUMAN (Serine/threonine-protein kinase OSR1 OS=Homo sapiens GN=OXSR1 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.645e-11
Identity = 53/183 (28.96%), Postives = 84/183 (45.90%), Query Frame = 2
Query:  107 VLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV----DVRKTNVTTQVRGTMGHIAPEYLSTGKSSE-RTDVFGYGIMLLELVTGQRAIDFSRXXXXXXXXXXXXXXXXXREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 640
            VLD  T   +      GLEYLH++     IHRDVKA N+LL ED    + DFG++  +    D+ +  V     GT   +APE +   +  + + D++ +GI  +EL TG  A  + +                  E     + D+ + K Y     ++  ++  LC Q  PE RP  +E++R
Sbjct:  117 VLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATG--AAPYHKYPPMKVLMLTLQNDPPSLE---TGVQDKEMLKKYG----KSFRKMISLCLQKDPEKRPTAAELLR 287          
BLAST of CX297760 vs. ExPASy Swiss-Prot
Match: M313B_XENLA (Mitogen-activated protein kinase kinase kinase 13-B OS=Xenopus laevis GN=map3k13-B PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.645e-11
Identity = 40/114 (35.09%), Postives = 67/114 (58.77%), Query Frame = 2
Query:   83 REIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQ 424
            R++ P + +++W T      G A G+ YLH H   KIIHRD+K+ NVL+       + DFG +K +  + T ++    GT+  +APE +     SE+ D++ +G++L EL+TG+
Sbjct:  252 RKVTP-KLLVEWST------GIASGMNYLHLH---KIIHRDLKSPNVLVTHADTVKISDFGTSKELSDKSTKMS--FAGTVAWMAPEVIRNEPVSEKVDIWSFGVLLWELLTGE 353          
BLAST of CX297760 vs. ExPASy Swiss-Prot
Match: Y9955_DICDI (Probable serine/threonine-protein kinase DDB_G0267514 OS=Dictyostelium discoideum GN=DDB_G0267514 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.149e-11
Identity = 46/139 (33.09%), Postives = 76/139 (54.68%), Query Frame = 2
Query:   14 CTTPTERLLVYPFMQNLSV--AYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQ 424
            CT P     +  ++   S+  A   ++IK     ++    K++A+  A+G+ YLH      +IHRD+K+ N+LLDE     + DFGL+KL    K+   T+  G+   ++PE L     +E+ DV+ +GI+L EL TG+
Sbjct:  727 CTAPPNLCFITEYLPGGSLYDALHSKKIK-----MNMQLYKKLAIQIAQGMNYLHLS---GVIHRDIKSLNLLLDEHMNVKICDFGLSKLKS--KSTEMTKSIGSPIWMSPELLMGEDYTEKVDVYAFGIILWELGTGE 855          
BLAST of CX297760 vs. ExPASy Swiss-Prot
Match: Y2579_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At2g25790 OS=Arabidopsis thaliana GN=At2g25790 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.149e-11
Identity = 45/201 (22.39%), Postives = 94/201 (46.77%), Query Frame = 2
Query:   65 SVAYRLREIKPGEPV------LDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRXXXXXXXXXXXXXXXXXREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLE 649
            +VAY + E   G+ +      L W  R+++  G    L +LH  C+P ++  ++   N+++D   E  +   GL  L+ +              ++APE     + + ++D++G+GI+LL L+TG+ +                          +D  +D +++ + + +E+  ++ +AL CT   P++RP  + V++ LE
Sbjct:  752 TVAYLIHEDVEGKRLSQVLSGLSWERRRKIMKGIVEALRFLHCRCSPAVVAGNLSPENIVIDVTDEPRL-CLGLPGLLCM-----------DAAYMAPETREHKEMTSKSDIYGFGILLLHLLTGKCSSSNEDIESGVNGSLVKWARYSYSNCHIDTWIDSSIDTSVHQREIVHVMNLALKCTAIDPQERPCTNNVLQALE 940          
BLAST of CX297760 vs. ExPASy Swiss-Prot
Match: WNK9_ORYSJ (Probable serine/threonine-protein kinase WNK9 OS=Oryza sativa subsp. japonica GN=WNK9 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.149e-11
Identity = 40/98 (40.82%), Postives = 61/98 (62.24%), Query Frame = 2
Query:  128 KRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAV-VGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT 418
            KR A+    GLEYLH    P IIHRD+K  N+ ++ +   V +GDFGLA  +  +K +    ++GT+  +APE L TG  +E  D++ +G+ +LE+VT
Sbjct:  137 KRWAIQILTGLEYLHSQ-KPAIIHRDLKCDNIFINGNHGKVKIGDFGLATFMQQQKKS----IKGTLEFMAPELL-TGHYNELVDIYSFGMCMLEMVT 228          
BLAST of CX297760 vs. ExPASy Swiss-Prot
Match: RIPK2_BOVIN (Receptor-interacting serine/threonine-protein kinase 2 OS=Bos taurus GN=RIPK2 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.149e-11
Identity = 43/151 (28.48%), Postives = 79/151 (52.32%), Query Frame = 2
Query:    5 IGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK----LVDVRKTNVTTQVRGTMGHIAPEYLSTG---KSSERTDVFGYGIMLLELVTGQRAID 436
            +G C  P    +V  +M N S+   L   K   P + W  R R+    A G+ YLH + NP ++H D+K  N+LLD +F   + DFGL+K     +   +++ +    GT+ ++ PE    G   ++S + D++ Y I++ E+++ ++  +
Sbjct:   82 LGICNEPEFLGIVTEYMPNGSLNELLHR-KIEYPDVPWPLRFRILHEIALGVNYLH-NMNPPLLHHDLKTQNILLDNEFHVKIADFGLSKWRMMSLSQSRSSKSAPEGGTIVYMPPENYEPGQKARASVKHDIYSYAIIIWEVLSRKQPFE 230          
The following BLAST results are available for this feature:
BLAST of CX297760 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 316
Match NameE-valueIdentityDescription
PYK1_DICDI1.260e-1135.14Dual specificity protein kinase pyk1 OS=Dictyostel... [more]
M313A_XENLA1.260e-1131.91Mitogen-activated protein kinase kinase kinase 13-... [more]
OXSR1_PONAB1.645e-1128.96Serine/threonine-protein kinase OSR1 OS=Pongo abel... [more]
OXSR1_MOUSE1.645e-1128.96Serine/threonine-protein kinase OSR1 OS=Mus muscul... [more]
OXSR1_HUMAN1.645e-1128.96Serine/threonine-protein kinase OSR1 OS=Homo sapie... [more]
M313B_XENLA1.645e-1135.09Mitogen-activated protein kinase kinase kinase 13-... [more]
Y9955_DICDI2.149e-1133.09Probable serine/threonine-protein kinase DDB_G0267... [more]
Y2579_ARATH2.149e-1122.39Probably inactive leucine-rich repeat receptor-lik... [more]
WNK9_ORYSJ2.149e-1140.82Probable serine/threonine-protein kinase WNK9 OS=O... [more]
RIPK2_BOVIN2.149e-1128.48Receptor-interacting serine/threonine-protein kina... [more]

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Properties
Property NameValue
Genbank descriptionC06004H11SK RindPdig24 Citrus clementina cDNA clone C06004H11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX297760 ID=CX297760; Name=CX297760; organism=Citrus clementina; type=EST; length=688bp
GAGGATTGGATTTTGCACAACACCTACTGAACGTCTCTTGGTGTATCCAT
TTATGCAGAACTTGAGTGTAGCCTATCGCTTACGAGAAATTAAACCTGGA
GAGCCTGTTTTGGACTGGGTTACAAGAAAACGAGTGGCATTAGGTGCAGC
ACGTGGCCTGGAATATCTTCATGAGCATTGCAATCCTAAGATCATACATC
GGGATGTGAAGGCTGCAAATGTATTACTGGATGAAGATTTTGAAGCAGTT
GTTGGTGACTTTGGATTGGCAAAATTGGTGGACGTGAGAAAGACTAATGT
GACAACTCAAGTTCGTGGGACAATGGGCCACATAGCTCCTGAGTACTTGT
CCACTGGGAAATCATCAGAAAGGACAGATGTTTTTGGTTATGGGATTATG
CTTCTGGAGCTTGTAACAGGTCAAAGGGCAATTGACTTTTCACGTTTGGA
AGAAGAAGATGATGTCCTATTGCTTGACCATGTCAAGAAGCTAGAGAGAG
AGAAAAGGTTGGATGCTATTGTAGATCGCAACCTTAATAAGAATTACAAC
ATCCAAGAGGTGGAGACAATGATTCAAGTTGCACTGCTCTGCACACAAGC
ATCACCAGAGGACCGTCCAGCAATGTCAGAGGTGGTGCGGATGTTGGAAG
GAGAGGGTCTAGCTGAGAGGTGGGAAGAGTGGCAGCAT
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