CX297866
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX297866 vs. ExPASy Swiss-Prot
Match: ARF5_CHICK (ADP-ribosylation factor 5 OS=Gallus gallus GN=ARF5 PE=2 SV=2) HSP 1 Score: 129.028 bits (323), Expect = 1.396e-29 Identity = 58/86 (67.44%), Postives = 73/86 (84.88%), Query Frame = 1 Query: 13 NDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 270 NDR+RV E+ +EL +ML EDELRDAVLLVFANKQD+PNAM +E+TDKLGL +LR R WY+Q+TCAT G GLY+GLDWLS+ ++ + Sbjct: 95 NDRERVQESAEELQKMLQEDELRDAVLLVFANKQDMPNAMVVSELTDKLGLQALRSRTWYVQATCATQGTGLYDGLDWLSHELSKR 180
BLAST of CX297866 vs. ExPASy Swiss-Prot
Match: ARF4_RAT (ADP-ribosylation factor 4 OS=Rattus norvegicus GN=Arf4 PE=2 SV=2) HSP 1 Score: 124.79 bits (312), Expect = 2.633e-28 Identity = 58/86 (67.44%), Postives = 70/86 (81.40%), Query Frame = 1 Query: 13 NDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 270 NDR+R+ E L +ML EDEL+DAVLL+FANKQDLPNAM +E+TDKLGL SLR R WY+Q+TCAT G GLYEGLDWLSN ++ + Sbjct: 95 NDRERIQEGAAVLQKMLLEDELQDAVLLLFANKQDLPNAMAISEMTDKLGLQSLRNRTWYVQATCATQGTGLYEGLDWLSNELSKR 180
BLAST of CX297866 vs. ExPASy Swiss-Prot
Match: ARF4_MOUSE (ADP-ribosylation factor 4 OS=Mus musculus GN=Arf4 PE=2 SV=2) HSP 1 Score: 124.79 bits (312), Expect = 2.633e-28 Identity = 58/86 (67.44%), Postives = 70/86 (81.40%), Query Frame = 1 Query: 13 NDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 270 NDR+R+ E L +ML EDEL+DAVLL+FANKQDLPNAM +E+TDKLGL SLR R WY+Q+TCAT G GLYEGLDWLSN ++ + Sbjct: 95 NDRERIQEGAAVLQKMLLEDELQDAVLLLFANKQDLPNAMAISEMTDKLGLQSLRNRTWYVQATCATQGTGLYEGLDWLSNELSKR 180
BLAST of CX297866 vs. ExPASy Swiss-Prot
Match: ARF6_RAT (ADP-ribosylation factor 6 OS=Rattus norvegicus GN=Arf6 PE=1 SV=2) HSP 1 Score: 120.168 bits (300), Expect = 6.486e-27 Identity = 52/81 (64.20%), Postives = 69/81 (85.19%), Query Frame = 1 Query: 16 DRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNN 258 DRDR+ EAR ELHR++N+ E+RDA++L+FANKQDLP+AM EI +KLGL +R R+WY+Q +CATSG+GLYEGL WL++N Sbjct: 92 DRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLYEGLTWLTSN 172
BLAST of CX297866 vs. ExPASy Swiss-Prot
Match: ARF6_PIG (ADP-ribosylation factor 6 OS=Sus scrofa GN=ARF6 PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 6.486e-27 Identity = 52/81 (64.20%), Postives = 69/81 (85.19%), Query Frame = 1 Query: 16 DRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNN 258 DRDR+ EAR ELHR++N+ E+RDA++L+FANKQDLP+AM EI +KLGL +R R+WY+Q +CATSG+GLYEGL WL++N Sbjct: 92 DRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLYEGLTWLTSN 172
BLAST of CX297866 vs. ExPASy Swiss-Prot
Match: ARF6_MOUSE (ADP-ribosylation factor 6 OS=Mus musculus GN=Arf6 PE=1 SV=2) HSP 1 Score: 120.168 bits (300), Expect = 6.486e-27 Identity = 52/81 (64.20%), Postives = 69/81 (85.19%), Query Frame = 1 Query: 16 DRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNN 258 DRDR+ EAR ELHR++N+ E+RDA++L+FANKQDLP+AM EI +KLGL +R R+WY+Q +CATSG+GLYEGL WL++N Sbjct: 92 DRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLYEGLTWLTSN 172
BLAST of CX297866 vs. ExPASy Swiss-Prot
Match: ARF6_HUMAN (ADP-ribosylation factor 6 OS=Homo sapiens GN=ARF6 PE=1 SV=2) HSP 1 Score: 120.168 bits (300), Expect = 6.486e-27 Identity = 52/81 (64.20%), Postives = 69/81 (85.19%), Query Frame = 1 Query: 16 DRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNN 258 DRDR+ EAR ELHR++N+ E+RDA++L+FANKQDLP+AM EI +KLGL +R R+WY+Q +CATSG+GLYEGL WL++N Sbjct: 92 DRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLYEGLTWLTSN 172
BLAST of CX297866 vs. ExPASy Swiss-Prot
Match: ARF6_CHICK (ADP-ribosylation factor 6 OS=Gallus gallus GN=ARF6 PE=2 SV=3) HSP 1 Score: 119.013 bits (297), Expect = 1.445e-26 Identity = 51/81 (62.96%), Postives = 69/81 (85.19%), Query Frame = 1 Query: 16 DRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNN 258 DRDR+ EAR ELHR++N+ E+RDA++L+FANKQDLP+AM EI +KLGL +R R+WY+Q +CAT+G+GLYEGL WL++N Sbjct: 92 DRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATTGDGLYEGLTWLTSN 172
BLAST of CX297866 vs. ExPASy Swiss-Prot
Match: ARF6_XENLA (ADP-ribosylation factor 6 OS=Xenopus laevis GN=arf6 PE=2 SV=2) HSP 1 Score: 118.242 bits (295), Expect = 2.465e-26 Identity = 51/81 (62.96%), Postives = 68/81 (83.95%), Query Frame = 1 Query: 16 DRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNN 258 DRDR+ EAR ELHR++N+ E+RDA++L+FANKQDLP+AM EI +KLGL +R R+WY+Q +CA SG+GLYEGL WL++N Sbjct: 92 DRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCAASGDGLYEGLTWLTSN 172
BLAST of CX297866 vs. ExPASy Swiss-Prot
Match: ARF_GIALA (ADP-ribosylation factor OS=Giardia lamblia PE=3 SV=3) HSP 1 Score: 116.701 bits (291), Expect = 7.171e-26 Identity = 52/82 (63.41%), Postives = 68/82 (82.93%), Query Frame = 1 Query: 25 RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 270 R+ +A++ELH +L EDELRDA LLVFANKQDLP AM+ ++T++LGL L++R WYIQ TCA SG+GLY+GLDWLS+ I +K Sbjct: 101 RIEDAKNELHTLLGEDELRDAALLVFANKQDLPKAMSTTDLTERLGLQELKKRDWYIQPTCARSGDGLYQGLDWLSDYIFDK 182 The following BLAST results are available for this feature:
BLAST of CX297866 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 115
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Sequences
The
following sequences are available for this feature:
EST sequence >CX297866 ID=CX297866; Name=CX297866; organism=Citrus clementina; type=EST; length=540bpback to top |