CX297866
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX297866 vs. ExPASy Swiss-Prot
Match: ARF3_DROME (ADP-ribosylation factor 3 OS=Drosophila melanogaster GN=Arf51F PE=2 SV=3) HSP 1 Score: 115.546 bits (288), Expect = 1.597e-25 Identity = 51/81 (62.96%), Postives = 68/81 (83.95%), Query Frame = 1 Query: 16 DRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNN 258 DRDR+ EAR ELHR++N+ E+RDA++L+FANKQDLP+AM EI +KLGL +R R+WY+Q +CATSG+GL EGL WL++N Sbjct: 92 DRDRIDEARTELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLSEGLIWLTSN 172
BLAST of CX297866 vs. ExPASy Swiss-Prot
Match: ARF4_ARATH (Probable ADP-ribosylation factor At2g15310 OS=Arabidopsis thaliana GN=At2g15310 PE=2 SV=3) HSP 1 Score: 108.612 bits (270), Expect = 1.953e-23 Identity = 52/86 (60.47%), Postives = 66/86 (76.74%), Query Frame = 1 Query: 13 NDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 270 +D +R+ EAR+ELHR+L ++EL A +LVFANKQD NA+ AE+ +KLGLHSL +R W IQ T A SG+GLYEGL+WLS I NK Sbjct: 95 SDSERLSEARNELHRILTDNELEGACVLVFANKQDSRNALPVAEVANKLGLHSLSKRCWLIQGTSAISGQGLYEGLEWLSTTIPNK 180
BLAST of CX297866 vs. ExPASy Swiss-Prot
Match: ARF3_ARATH (ADP-ribosylation factor 3 OS=Arabidopsis thaliana GN=ARF3 PE=1 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 2.820e-22 Identity = 46/83 (55.42%), Postives = 62/83 (74.70%), Query Frame = 1 Query: 13 NDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 261 +D DR+ A++E H +L EDEL+ AV+L+FANKQDLP A++ A +T+ L LH ++ R W I TCA GEGL+EGLDWLSN + Sbjct: 95 SDTDRIGVAKEEFHAILEEDELKGAVVLIFANKQDLPGALDDAAVTEALELHKIKSRQWAIFKTCAVKGEGLFEGLDWLSNTL 177
BLAST of CX297866 vs. ExPASy Swiss-Prot
Match: ARF1_BRARP (ADP-ribosylation factor 1 OS=Brassica rapa subsp. pekinensis GN=ARF1 PE=2 SV=3) HSP 1 Score: 103.219 bits (256), Expect = 8.204e-22 Identity = 45/83 (54.22%), Postives = 62/83 (74.70%), Query Frame = 1 Query: 13 NDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 261 +D DR+ A++E H +L E+EL+ AV+L+FANKQDLP A++ A +T+ L LH ++ R W I TCA GEGL+EGLDWLSN + Sbjct: 95 SDTDRIGVAKEEFHAILEEEELKGAVVLIFANKQDLPGALDDAAVTEALELHKIKSRQWAIFKTCAVKGEGLFEGLDWLSNTL 177
BLAST of CX297866 vs. ExPASy Swiss-Prot
Match: ARF2_SCHPO (Probable ADP-ribosylation factor OS=Schizosaccharomyces pombe GN=SPBC1539.08 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 9.071e-21 Identity = 46/81 (56.79%), Postives = 61/81 (75.31%), Query Frame = 1 Query: 16 DRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNN 258 D +R+ EAR ELHR++++ E+RD +LLV ANKQDLP A++ A+ITD L L L+ R W +Q TCA +G+GL EGL WLS N Sbjct: 100 DSNRISEARQELHRIISDREMRDCLLLVLANKQDLPGALSPAQITDVLQLDKLKDRLWNVQPTCALTGDGLLEGLAWLSQN 180
BLAST of CX297866 vs. ExPASy Swiss-Prot
Match: ARFJ_DICDI (ADP-ribosylation factor J OS=Dictyostelium discoideum GN=arrJ PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.310e-19 Identity = 41/85 (48.24%), Postives = 62/85 (72.94%), Query Frame = 1 Query: 16 DRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 270 DR+R+ E ++E+ +L +DEL+ +LVFANKQD+ NAMN AEI + L L+S++ R WY+Q A +G+YEG DW++N++ NK Sbjct: 104 DRERMDEVKEEIDNLLIQDELKGTQILVFANKQDMNNAMNTAEIVNSLDLNSIKDRKWYVQPCSAIRSDGIYEGFDWVANSLNNK 188
BLAST of CX297866 vs. ExPASy Swiss-Prot
Match: ARD1_RAT (GTP-binding protein ARD-1 (Fragment) OS=Rattus norvegicus GN=Trim23 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 3.811e-19 Identity = 48/82 (58.54%), Postives = 58/82 (70.73%), Query Frame = 1 Query: 19 RDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL-RQRHWYIQSTCATSGEGLYEGLDWLSNNI 261 RDR+ EA EL ++L E ELRDA+LL+FANKQD+ A++ EIT+ L LH L R WYIQ A SG GLYEGLDWLS + Sbjct: 464 RDRISEAHSELAKLLTEKELRDALLLIFANKQDVAGALSVEEITELLSLHKLCCGRSWYIQGCDARSGMGLYEGLDWLSRQL 545
BLAST of CX297866 vs. ExPASy Swiss-Prot
Match: ARD1_MOUSE (GTP-binding protein ARD-1 OS=Mus musculus GN=Trim23 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 3.811e-19 Identity = 48/82 (58.54%), Postives = 58/82 (70.73%), Query Frame = 1 Query: 19 RDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL-RQRHWYIQSTCATSGEGLYEGLDWLSNNI 261 RDR+ EA EL ++L E ELRDA+LL+FANKQD+ A++ EIT+ L LH L R WYIQ A SG GLYEGLDWLS + Sbjct: 484 RDRISEAHSELAKLLTEKELRDALLLIFANKQDVAGALSVEEITELLSLHKLCCGRSWYIQGCDARSGMGLYEGLDWLSRQL 565
BLAST of CX297866 vs. ExPASy Swiss-Prot
Match: ARD1_HUMAN (GTP-binding protein ARD-1 OS=Homo sapiens GN=TRIM23 PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 3.811e-19 Identity = 48/82 (58.54%), Postives = 58/82 (70.73%), Query Frame = 1 Query: 19 RDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL-RQRHWYIQSTCATSGEGLYEGLDWLSNNI 261 RDR+ EA EL ++L E ELRDA+LL+FANKQD+ A++ EIT+ L LH L R WYIQ A SG GLYEGLDWLS + Sbjct: 484 RDRISEAHSELAKLLTEKELRDALLLIFANKQDVAGALSVEEITELLSLHKLCCGRSWYIQGCDARSGMGLYEGLDWLSRQL 565
BLAST of CX297866 vs. ExPASy Swiss-Prot
Match: ARFK_DICDI (ADP-ribosylation factor K OS=Dictyostelium discoideum GN=arrK PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 6.501e-19 Identity = 40/85 (47.06%), Postives = 61/85 (71.76%), Query Frame = 1 Query: 16 DRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 270 DR+R+ E ++E+ +L +DEL+ +LV ANKQD+ NAMN AEI + L L+S++ R WY+Q A +G+YEG DW++N++ NK Sbjct: 104 DRERMDEVKEEIDNLLIQDELKGIQILVLANKQDMNNAMNTAEIVNSLNLNSIKDRKWYVQPCSAIRSDGIYEGFDWVANSLNNK 188 The following BLAST results are available for this feature:
BLAST of CX297866 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 115
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Sequences
The
following sequences are available for this feature:
EST sequence >CX297866 ID=CX297866; Name=CX297866; organism=Citrus clementina; type=EST; length=540bpback to top |