CX297944
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX297944 vs. ExPASy Swiss-Prot
Match: NLTP1_PHAAU (Non-specific lipid-transfer protein 1 OS=Phaseolus aureus PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.530e-17 Identity = 40/92 (43.48%), Postives = 61/92 (66.30%), Query Frame = 3 Query: 87 VTCGQVTSSLQACMXXXXXXXXXXXXXXCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSIRNLNLNLASGLPRQCGVNIPYQISPSVDCSRV 362 +TCGQV +L C+ CC+G+K++ +++ TT DR++VC+CLK AAG++R +N N A LP +CGVNIPY+IS S +C+ + Sbjct: 1 MTCGQVQGNLAQCIGFLQKGGVVPPS--CCTGVKNILNSSRTTADRRAVCSCLKAAAGAVRGINPNNAEALPGKCGVNIPYKISTSTNCNSI 90
BLAST of CX297944 vs. ExPASy Swiss-Prot
Match: NLTP_ELECO (Non-specific lipid-transfer protein OS=Eleusine coracana PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.304e-17 Identity = 44/94 (46.81%), Postives = 61/94 (64.89%), Query Frame = 3 Query: 84 AVTCGQVTSSLQACMXXXXXXXXXXXXXXCCSGIKSLNSAATTTPDRQSVCNC-LKTAAGSIRNLNLNLASGLPRQCGVNIPYQISPSVDCSRV 362 A++CGQV+S++ C+ C SG++SLN+AA TT DR++ CNC LK+AA + LN AS +P +CGV +PY IS S+DCSRV Sbjct: 1 AISCGQVSSAIGPCLAYARGAGAAPSAS-CQSGVRSLNAAARTTADRRAACNCSLKSAASRVSGLNAGKASSIPGRCGVRLPYAISASIDCSRV 93
BLAST of CX297944 vs. ExPASy Swiss-Prot
Match: NLTPC_ARATH (Non-specific lipid-transfer protein 12 OS=Arabidopsis thaliana GN=LTP12 PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.304e-17 Identity = 44/113 (38.94%), Postives = 64/113 (56.64%), Query Frame = 3 Query: 24 KLACAVLLMCMVMGAPIAQAAVTCGQVTSSLQACMXXXXXXXXXXXXXXCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSIRNLNLNLASGLPRQCGVNIPYQISPSVDCSRV 362 K+ ++++ + M +P ++ + CG VTS+L C+ CC G+KSL A TTPDR+ VC CLK A I+ LN +L + LP CGV+IPY IS S +C + Sbjct: 6 KIITCLIVLTIYMASP-TESTIQCGTVTSTLAQCLTYLTNSGPLPSQ--CCVGVKSLYQLAQTTPDRKQVCECLKLAGKEIKGLNTDLVAALPTTCGVSIPYPISFSTNCDSI 115
BLAST of CX297944 vs. ExPASy Swiss-Prot
Match: NLTP5_VITSX (Non-specific lipid-transfer protein P5 OS=Vitis sp. PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 9.614e-17 Identity = 40/92 (43.48%), Postives = 58/92 (63.04%), Query Frame = 3 Query: 87 VTCGQVTSSLQACMXXXXXXXXXXXXXXCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSIRNLNLNLASGLPRQCGVNIPYQISPSVDCSRV 362 ++CG V + L C+ CC+G+K+L ++A TT DR++ C CL A+ SI +N LA+GLP +CGVNIPY+ISPS +C +V Sbjct: 1 LSCGDVATQLAPCINYLRSAGPLPVA--CCNGVKNLKNSAATTQDRRTACKCLINASKSISGVNFGLAAGLPGKCGVNIPYKISPSTNCDQV 90
BLAST of CX297944 vs. ExPASy Swiss-Prot
Match: NLTP3_VITSX (Non-specific lipid-transfer protein P3 OS=Vitis sp. PE=1 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 1.256e-16 Identity = 38/92 (41.30%), Postives = 61/92 (66.30%), Query Frame = 3 Query: 87 VTCGQVTSSLQACMXXXXXXXXXXXXXXCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSIRNLNLNLASGLPRQCGVNIPYQISPSVDCSRV 362 ++CG V + + +C+ CC+G+K+L ++ATTT DR++ C CL +A+ +I +N LA+GLP +CGV+IPY+ISPS +C +V Sbjct: 1 LSCGDVATQMASCINYLRGAGPLPAA--CCNGVKNLKNSATTTQDRRTACKCLISASKTISGVNFGLAAGLPAKCGVSIPYKISPSTNCDQV 90
BLAST of CX297944 vs. ExPASy Swiss-Prot
Match: NLTP7_ARATH (Non-specific lipid-transfer protein 7 OS=Arabidopsis thaliana GN=LTP7 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.640e-16 Identity = 42/115 (36.52%), Postives = 65/115 (56.52%), Query Frame = 3 Query: 21 LKLACAVLLMCMVMGAPIAQAAVTCGQVTSSLQACMXXXXXXXXXXXXXXCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSI-RNLNLNLASGLPRQCGVNIPY--QISPSVDCS 356 +KL C V + + G A+AA++CG+V S+L+ C CC+G++ LN TT DR+ C C+K AA ++ LN + A+G+PR+CG+ IPY QI + C+ Sbjct: 5 MKLGCLVFVFVIAAGPITAKAALSCGEVNSNLKPCTGYLTNGGITSPGPQCCNGVRKLNGMVLTTLDRRQACRCIKNAARNVGPGLNADRAAGIPRRCGIKIPYSTQIRFNTKCN 119
BLAST of CX297944 vs. ExPASy Swiss-Prot
Match: NLTP_AMACA (Non-specific lipid-transfer protein OS=Amaranthus caudatus PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.797e-16 Identity = 39/94 (41.49%), Postives = 57/94 (60.64%), Query Frame = 3 Query: 84 AVTCGQVTSSLQACMXXXXXXXXXXXXXXCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSIRNLNLNLASGLPRQCGVNIPYQISPSVDCSRVR 365 AVTC VT +L CM CC+G++SL +AA T DR+ CNC+K+AA ++LN +A+ L QCGV + Y +SP+V+C+ V+ Sbjct: 1 AVTCTVVTKALGPCMTYLKGTGATPPPANCCAGVRSLKAAAQTVADRRMACNCMKSAAQKTKSLNYKVAARLASQCGVRMSYSVSPNVNCNSVQ 94
BLAST of CX297944 vs. ExPASy Swiss-Prot
Match: NLTP1_AMAHP (Non-specific lipid-transfer protein 1 OS=Amaranthus hypochondriacus PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.797e-16 Identity = 39/94 (41.49%), Postives = 57/94 (60.64%), Query Frame = 3 Query: 84 AVTCGQVTSSLQACMXXXXXXXXXXXXXXCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSIRNLNLNLASGLPRQCGVNIPYQISPSVDCSRVR 365 AVTC VT +L CM CC+G++SL +AA T DR+ CNC+K+AA ++LN +A+ L QCGV + Y +SP+V+C+ V+ Sbjct: 1 AVTCTVVTKALGPCMTYLKGTGATPPPANCCAGVRSLKAAAQTVADRRMACNCMKSAAQKTKSLNYKVAARLASQCGVRMSYSVSPNVNCNSVQ 94
BLAST of CX297944 vs. ExPASy Swiss-Prot
Match: NLTP5_ARATH (Non-specific lipid-transfer protein 5 OS=Arabidopsis thaliana GN=LTP5 PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.276e-15 Identity = 49/117 (41.88%), Postives = 67/117 (57.26%), Query Frame = 3 Query: 21 LKLACAVLLMCMVMGAPIA-QAAVTCGQVTSSLQACMXXXXXXXXXXXXXXCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSI-RNLNLNLASGLPRQCGVNIPYQISPSVDCSRVR 365 LKL+ V++ CM++ AP+A +AA++CG VT SL C CCSG++ LNS A TT DRQ C C++ AA ++ LN A+ LP C V I Y IS +C+ VR Sbjct: 5 LKLSTLVIV-CMLVTAPMASEAAISCGAVTGSLGQCYNYLTRGGFIPRG--CCSGVQRLNSLARTTRDRQQACRCIQGAARALGSRLNAGRAARLPGACRVRISYPISARTNCNTVR 118
BLAST of CX297944 vs. ExPASy Swiss-Prot
Match: NLTP6_ARATH (Non-specific lipid-transfer protein 6 OS=Arabidopsis thaliana GN=LTP6 PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.005e-14 Identity = 39/111 (35.14%), Postives = 62/111 (55.86%), Query Frame = 3 Query: 39 VLLMCMVMGAPIAQAAVTCGQVTSSLQACMXXXXXXXXXXXXXXCCSGIKSLNSAATTTPDRQSVCNCLKTAAG--SIRNLNLNLASGLPRQCGVNIPYQISPSVDCSRVR 365 +L +C+V+ +AAV+C V + L C+ CC+G+ +L S A T+ DRQ VC C+K+A G ++ + A LP +CGV++PY+ SPS DC ++ Sbjct: 5 LLAVCLVLALHCGEAAVSCNTVIADLYPCLSYVTQGGPVPTL--CCNGLTTLKSQAQTSVDRQGVCRCIKSAIGGLTLSPRTIQNALELPSKCGVDLPYKFSPSTDCDSIQ 113 The following BLAST results are available for this feature:
BLAST of CX297944 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 76
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX297944 ID=CX297944; Name=CX297944; organism=Citrus clementina; type=EST; length=677bpback to top |