CX298054

Overview
NameCX298054
Unique NameCX298054
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length642
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX298054 vs. ExPASy Swiss-Prot
Match: COQ5_DANRE (Ubiquinone biosynthesis methyltransferase COQ5, mitochondrial OS=Danio rerio GN=coq5 PE=2 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 6.368e-60
Identity = 123/228 (53.95%), Postives = 151/228 (66.23%), Query Frame = 2
Query:    8 VSHVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRR-----------------ALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYQDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPAIGELVAGDRGSYQYLVESVRRFPPQ 640
            V  VF SVAK YD+MND MS G+HRLWKD L+  +NP PG++ LD AGGTGD++FR L+   S+  R                 A   V +++   ++R  VCDIN  ML VGK+RA + G     L WV GDAE L F+D   D YTIAFGIRNVTHIE+AL EA+RVLK GGRF+CLE S V  P+   LYD YSF +IP +GE++AGD  SYQYLVES+R+FP Q
Sbjct:   68 VYKVFESVAKKYDVMNDAMSLGIHRLWKDTLLHIMNPQPGLRLLDTAGGTGDISFRFLEYTRSMYDRQQRLRAKSQQTPSWKDIAGHYVSDEEGPPQSRAVVCDINKEMLKVGKQRAEDAGITT-GLSWVAGDAEELPFDDDQFDMYTIAFGIRNVTHIEQALQEAFRVLKPGGRFMCLEFSKVTNPLLARLYDAYSFQMIPVLGEVIAGDWKSYQYLVESIRKFPDQ 294          
BLAST of CX298054 vs. ExPASy Swiss-Prot
Match: UBIE_BRUSU (Ubiquinone/menaquinone biosynthesis methyltransferase ubiE OS=Brucella suis GN=ubiE PE=3 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 5.960e-58
Identity = 115/214 (53.74%), Postives = 150/214 (70.09%), Query Frame = 2
Query:    5 LVSHVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPF--PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYQDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPAIGELVAGDRGSYQYLVESVRRFPPQ 640
            LV+ VF  VAK YD+MNDLMS G+HR+WKD +V+ L P   PG   LDVAGGTGD+AFRI++                    +  + + DIN +ML VG++RA+++G  D +L +VE +AE L FED++ D YTIAFGIRNV HI+KAL+EAYRVLK GGRFLCLE S V++PV  ++YD +SF  IP IG+++ GD  SY YLVES+R+FP Q
Sbjct:   40 LVNDVFHKVAKRYDIMNDLMSAGMHRVWKDAMVAWLTPSKRPGWTSLDVAGGTGDIAFRIVEVSG----------------RQAHVTILDINGSMLGVGRERAIKKGLID-NLEFVEANAEELPFEDNSFDAYTIAFGIRNVPHIDKALSEAYRVLKPGGRFLCLEFSEVELPVLDKVYDEWSFRAIPRIGKMITGDADSYSYLVESIRKFPKQ 236          
BLAST of CX298054 vs. ExPASy Swiss-Prot
Match: UBIE_BRUME (Ubiquinone/menaquinone biosynthesis methyltransferase ubiE OS=Brucella melitensis GN=ubiE PE=3 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.017e-57
Identity = 115/214 (53.74%), Postives = 150/214 (70.09%), Query Frame = 2
Query:    5 LVSHVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPF--PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYQDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPAIGELVAGDRGSYQYLVESVRRFPPQ 640
            LV+ VF  VAK YD+MNDLMS G+HR+WKD +V+ L P   PG   LDVAGGTGD+AFRI++                    +  + + DIN +ML VG++RA+++G  D +L +VE +AE L FED++ D YTIAFGIRNV HI+KAL+EAYRVLK GGRFLCLE S V++PV  ++YD +SF  IP IG+++ GD  SY YLVES+R+FP Q
Sbjct:   40 LVNDVFHKVAKRYDIMNDLMSAGMHRVWKDAMVAWLAPSKRPGWTSLDVAGGTGDIAFRIVEASG----------------RQAHVTILDINGSMLGVGRERAIKKGLID-NLEFVEANAEELPFEDNSFDAYTIAFGIRNVPHIDKALSEAYRVLKPGGRFLCLEFSEVELPVLDKVYDEWSFRAIPRIGKMITGDADSYSYLVESIRKFPKQ 236          
BLAST of CX298054 vs. ExPASy Swiss-Prot
Match: UBIE_BRUMB (Ubiquinone/menaquinone biosynthesis methyltransferase ubiE OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=ubiE PE=3 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.017e-57
Identity = 115/214 (53.74%), Postives = 150/214 (70.09%), Query Frame = 2
Query:    5 LVSHVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPF--PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYQDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPAIGELVAGDRGSYQYLVESVRRFPPQ 640
            LV+ VF  VAK YD+MNDLMS G+HR+WKD +V+ L P   PG   LDVAGGTGD+AFRI++                    +  + + DIN +ML VG++RA+++G  D +L +VE +AE L FED++ D YTIAFGIRNV HI+KAL+EAYRVLK GGRFLCLE S V++PV  ++YD +SF  IP IG+++ GD  SY YLVES+R+FP Q
Sbjct:   40 LVNDVFHKVAKRYDIMNDLMSAGMHRVWKDAMVAWLAPSKRPGWTSLDVAGGTGDIAFRIVEASG----------------RQAHVTILDINGSMLGVGRERAIKKGLID-NLEFVEANAEELPFEDNSFDAYTIAFGIRNVPHIDKALSEAYRVLKPGGRFLCLEFSEVELPVLDKVYDEWSFRAIPRIGKMITGDADSYSYLVESIRKFPKQ 236          
BLAST of CX298054 vs. ExPASy Swiss-Prot
Match: UBIE_BRUC2 (Ubiquinone/menaquinone biosynthesis methyltransferase ubiE OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=ubiE PE=3 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.017e-57
Identity = 115/214 (53.74%), Postives = 150/214 (70.09%), Query Frame = 2
Query:    5 LVSHVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPF--PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYQDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPAIGELVAGDRGSYQYLVESVRRFPPQ 640
            LV+ VF  VAK YD+MNDLMS G+HR+WKD +V+ L P   PG   LDVAGGTGD+AFRI++                    +  + + DIN +ML VG++RA+++G  D +L +VE +AE L FED++ D YTIAFGIRNV HI+KAL+EAYRVLK GGRFLCLE S V++PV  ++YD +SF  IP IG+++ GD  SY YLVES+R+FP Q
Sbjct:   40 LVNDVFHKVAKRYDIMNDLMSAGMHRVWKDAMVAWLAPSKRPGWTSLDVAGGTGDIAFRIVEVSG----------------RQAHVTILDINGSMLGVGRERAIKKGLID-NLEFVEANAEELPFEDNSFDAYTIAFGIRNVPHIDKALSEAYRVLKPGGRFLCLEFSEVELPVLDKVYDEWSFRAIPRIGKMITGDADSYSYLVESIRKFPKQ 236          
BLAST of CX298054 vs. ExPASy Swiss-Prot
Match: UBIE_BRUAB (Ubiquinone/menaquinone biosynthesis methyltransferase ubiE OS=Brucella abortus GN=ubiE PE=3 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.017e-57
Identity = 115/214 (53.74%), Postives = 150/214 (70.09%), Query Frame = 2
Query:    5 LVSHVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPF--PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYQDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPAIGELVAGDRGSYQYLVESVRRFPPQ 640
            LV+ VF  VAK YD+MNDLMS G+HR+WKD +V+ L P   PG   LDVAGGTGD+AFRI++                    +  + + DIN +ML VG++RA+++G  D +L +VE +AE L FED++ D YTIAFGIRNV HI+KAL+EAYRVLK GGRFLCLE S V++PV  ++YD +SF  IP IG+++ GD  SY YLVES+R+FP Q
Sbjct:   40 LVNDVFHKVAKRYDIMNDLMSAGMHRVWKDAMVAWLAPSKRPGWTSLDVAGGTGDIAFRIVEASG----------------RQAHVTILDINGSMLGVGRERAIKKGLID-NLEFVEANAEELPFEDNSFDAYTIAFGIRNVPHIDKALSEAYRVLKPGGRFLCLEFSEVELPVLDKVYDEWSFRAIPRIGKMITGDADSYSYLVESIRKFPKQ 236          
BLAST of CX298054 vs. ExPASy Swiss-Prot
Match: UBIE_BRUA2 (Ubiquinone/menaquinone biosynthesis methyltransferase ubiE OS=Brucella abortus (strain 2308) GN=ubiE PE=3 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.017e-57
Identity = 115/214 (53.74%), Postives = 150/214 (70.09%), Query Frame = 2
Query:    5 LVSHVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPF--PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYQDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPAIGELVAGDRGSYQYLVESVRRFPPQ 640
            LV+ VF  VAK YD+MNDLMS G+HR+WKD +V+ L P   PG   LDVAGGTGD+AFRI++                    +  + + DIN +ML VG++RA+++G  D +L +VE +AE L FED++ D YTIAFGIRNV HI+KAL+EAYRVLK GGRFLCLE S V++PV  ++YD +SF  IP IG+++ GD  SY YLVES+R+FP Q
Sbjct:   40 LVNDVFHKVAKRYDIMNDLMSAGMHRVWKDAMVAWLAPSKRPGWTSLDVAGGTGDIAFRIVEASG----------------RQAHVTILDINGSMLGVGRERAIKKGLID-NLEFVEANAEELPFEDNSFDAYTIAFGIRNVPHIDKALSEAYRVLKPGGRFLCLEFSEVELPVLDKVYDEWSFRAIPRIGKMITGDADSYSYLVESIRKFPKQ 236          
BLAST of CX298054 vs. ExPASy Swiss-Prot
Match: UBIE_BRUA1 (Ubiquinone/menaquinone biosynthesis methyltransferase ubiE OS=Brucella abortus (strain S19) GN=ubiE PE=3 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.017e-57
Identity = 115/214 (53.74%), Postives = 150/214 (70.09%), Query Frame = 2
Query:    5 LVSHVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPF--PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYQDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPAIGELVAGDRGSYQYLVESVRRFPPQ 640
            LV+ VF  VAK YD+MNDLMS G+HR+WKD +V+ L P   PG   LDVAGGTGD+AFRI++                    +  + + DIN +ML VG++RA+++G  D +L +VE +AE L FED++ D YTIAFGIRNV HI+KAL+EAYRVLK GGRFLCLE S V++PV  ++YD +SF  IP IG+++ GD  SY YLVES+R+FP Q
Sbjct:   40 LVNDVFHKVAKRYDIMNDLMSAGMHRVWKDAMVAWLAPSKRPGWTSLDVAGGTGDIAFRIVEASG----------------RQAHVTILDINGSMLGVGRERAIKKGLID-NLEFVEANAEELPFEDNSFDAYTIAFGIRNVPHIDKALSEAYRVLKPGGRFLCLEFSEVELPVLDKVYDEWSFRAIPRIGKMITGDADSYSYLVESIRKFPKQ 236          
BLAST of CX298054 vs. ExPASy Swiss-Prot
Match: UBIE_OCHA4 (Ubiquinone/menaquinone biosynthesis methyltransferase ubiE OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=ubiE PE=3 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 8.606e-57
Identity = 112/214 (52.34%), Postives = 148/214 (69.16%), Query Frame = 2
Query:    5 LVSHVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPF--PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYQDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPAIGELVAGDRGSYQYLVESVRRFPPQ 640
            LV+ VF  VA  YD+MNDLMS G+HR+WKD +++ L P   PG   LDVAGGTGD+AFRI++                    +  + + DIN +ML VG++RA+++G  D +L +VE  AE L FED++ D YTI+FGIRNV HI+KAL+EAYRVLK GGRFLCLE S V++PV  ++YD +SF  IP IG+++ GD  SY YLVES+R+FP Q
Sbjct:   34 LVNDVFHKVASKYDVMNDLMSAGMHRVWKDAMIAWLAPSKRPGWTSLDVAGGTGDIAFRIVEASG----------------RQAHVTILDINGSMLGVGRERAIKKGLAD-NLEFVEASAEELPFEDASFDAYTISFGIRNVPHIDKALSEAYRVLKPGGRFLCLEFSEVELPVLDKVYDQWSFHAIPRIGKMITGDADSYSYLVESIRKFPKQ 230          
BLAST of CX298054 vs. ExPASy Swiss-Prot
Match: UBIE_BRUSI (Ubiquinone/menaquinone biosynthesis methyltransferase ubiE OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=ubiE PE=3 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 8.606e-57
Identity = 114/214 (53.27%), Postives = 149/214 (69.63%), Query Frame = 2
Query:    5 LVSHVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPF--PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYQDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPAIGELVAGDRGSYQYLVESVRRFPPQ 640
            LV+ VF  VAK YD+MNDLMS G+HR+WKD +V+ L P   PG   LDVAGGTGD+AFRI++                    +  + + DIN +ML VG++RA+++G  D +L +VE +AE L FED++ D YTIAFGIRNV HI+KAL+EAY VLK GGRFLCLE S V++PV  ++YD +SF  IP IG+++ GD  SY YLVES+R+FP Q
Sbjct:   40 LVNDVFHKVAKRYDIMNDLMSAGMHRVWKDAMVAWLAPSKRPGWTSLDVAGGTGDIAFRIVEASG----------------RQAHVTILDINGSMLGVGRERAIKKGLID-NLEFVEANAEELPFEDNSFDAYTIAFGIRNVPHIDKALSEAYCVLKPGGRFLCLEFSEVELPVLDKVYDEWSFRAIPRIGKMITGDADSYSYLVESIRKFPKQ 236          
The following BLAST results are available for this feature:
BLAST of CX298054 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 408
Match NameE-valueIdentityDescription
COQ5_DANRE6.368e-6053.95Ubiquinone biosynthesis methyltransferase COQ5, mi... [more]
UBIE_BRUSU5.960e-5853.74Ubiquinone/menaquinone biosynthesis methyltransfer... [more]
UBIE_BRUME1.017e-5753.74Ubiquinone/menaquinone biosynthesis methyltransfer... [more]
UBIE_BRUMB1.017e-5753.74Ubiquinone/menaquinone biosynthesis methyltransfer... [more]
UBIE_BRUC21.017e-5753.74Ubiquinone/menaquinone biosynthesis methyltransfer... [more]
UBIE_BRUAB1.017e-5753.74Ubiquinone/menaquinone biosynthesis methyltransfer... [more]
UBIE_BRUA21.017e-5753.74Ubiquinone/menaquinone biosynthesis methyltransfer... [more]
UBIE_BRUA11.017e-5753.74Ubiquinone/menaquinone biosynthesis methyltransfer... [more]
UBIE_OCHA48.606e-5752.34Ubiquinone/menaquinone biosynthesis methyltransfer... [more]
UBIE_BRUSI8.606e-5753.27Ubiquinone/menaquinone biosynthesis methyltransfer... [more]

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Properties
Property NameValue
Genbank descriptionC06008B03SK RindPdig24 Citrus clementina cDNA clone C06008B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX298054 ID=CX298054; Name=CX298054; organism=Citrus clementina; type=EST; length=642bp
GTCATTGGTTAGCCATGTTTTCAGCAGTGTTGCTAAAAACTATGATCTCA
TGAATGATTTGATGAGTGGTGGATTGCATAGATTGTGGAAGGATAGACTT
GTTTCCAAGTTGAATCCATTTCCGGGAATGAAGCACCTTGATGTTGCTGG
TGGAACAGGGGATGTTGCTTTCAGGATTTTAGACACTGTAAATAGCATCA
AACGAAGAGCACTCCAGGATGTTCTTGAAGATGATTTACAGGAGGAAACT
CGGATATATGTTTGTGACATCAACCCAAACATGCTAAATGTTGGTAAAAA
GCGTGCTTTAGAGAGAGGTTACCAGGACAAATCACTTTTGTGGGTGGAAG
GAGATGCAGAAGCCTTGTGCTTTGAAGACAGTACTATGGATGGTTACACA
ATTGCCTTCGGAATTAGGAATGTTACTCATATTGAGAAGGCTCTAGCTGA
AGCTTACAGGGTACTGAAACGTGGAGGAAGATTTCTGTGCCTTGAGCTGA
GCCACGTCGATATTCCTGTATTCAAGGAATTGTACGATTATTACTCATTT
TCAGTCATTCCAGCAATAGGGGAACTGGTAGCAGGTGATCGGGGTTCTTA
TCAGTACTTGGTTGAGAGTGTCCGCCGTTTTCCCCCTCAGGA
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