CX298057

Overview
NameCX298057
Unique NameCX298057
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length677
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX298057 vs. ExPASy Swiss-Prot
Match: PATA_BACSU (Putative aminotransferase A OS=Bacillus subtilis GN=patA PE=1 SV=3)

HSP 1 Score: 136.732 bits (343), Expect = 1.058e-31
Identity = 69/213 (32.39%), Postives = 116/213 (54.46%), Query Frame = 2
Query:   17 AAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPEFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSF 655
            AA +AI +    Y    G  E   A+    KK +    D E E+ +T+G ++AI A    +++PGDEVI+  P Y  YE  +++ GAK   +      F +    ++  ++ NT+ +++  P NPTG   + EEL  IA+L    +V V SDE+Y +L ++  H SIA+   + ++T+ +N L K+ S+TGW+IG+  AP  +   + + H +
Sbjct:   49 AAKKAIDENVTSYTPNAGYLELRQAVQLYMKKKADFNYDAESEIIITTGASQAIDAAFRTILSPGDEVIMPGPIYPGYEPIINLCGAKPVIVDTTSHGFKLTARLIEDALTPNTKCVVLPYPSNPTGVTLSEEELKSIAALLKGRNVFVLSDEIYSELTYDRPHYSIATY--LRDQTIVINGLSKSHSMTGWRIGFLFAPKDIAKHILKVHQY 259          
BLAST of CX298057 vs. ExPASy Swiss-Prot
Match: AAT_AQUAE (Aspartate aminotransferase OS=Aquifex aeolicus GN=aspC PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.251e-31
Identity = 67/207 (32.37%), Postives = 122/207 (58.94%), Query Frame = 2
Query:    5 FC*DAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSY-EATLSMAGAKIKCITLRPPEFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAF-EMDHISIASLPGMYER-TVTMNSLGKTFSLTGWKIGWAIAP 616
            F  +A I+A+R+GK +YA   G+PE   AIA +  K++ +E  P  E+ V++G    +    + +++ GDEV+L +P++ +Y E      G  ++    +   F + +E++K  +++ T+AI++N+P+NPTG ++  EEL  IA  C+E  + + SDE Y+   + +   +S AS     +  T T+N+  K++S+TGW+IG+   P
Sbjct:   49 FIKEACIRALREGKTKYAPSAGIPELREAIAEKLLKENKVEYKPS-EIVVSAGAKMVLFLIFMAILDEGDEVLLPSPYWVTYPEQIRFFGGVPVEVPLKKEKGFQLSLEDVKEKVTERTKAIVINSPNNPTGAVYEEEELKKIAEFCVERGIFIISDECYEYFVYGDAKFVSPASFSDEVKNITFTVNAFSKSYSMTGWRIGYVACP 254          
BLAST of CX298057 vs. ExPASy Swiss-Prot
Match: AAT_STRVG (Aspartate aminotransferase OS=Streptomyces virginiae GN=aspC PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 5.806e-30
Identity = 69/224 (30.80%), Postives = 134/224 (59.82%), Query Frame = 2
Query:   14 DAAIQAIRDGK-NQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGA-KIKCITLRPPEFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAF-EMDHISIASL-PGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATS 673
            +AA++A R+ K ++Y    G+PE  +AIA++  +DSG EV+   +V VT+G  +AI      +++PGDEVI+ AP++ +Y  ++ +AG   +  +      + + +E+L++  ++ T+ +L  +P NPTG +++  +   I     E+ + V +DE+Y+ L + E    S+  L P + ++ + +N + KT+++TGW++GW IAP  +   ++ A +  + ATS
Sbjct:   48 EAAVEACRNPKYHRYTPAGGLPELKAAIAAKTLRDSGYEVEAS-QVLVTNGGKQAIYEAFAAILDPGDEVIVPAPYWTTYPESIRLAGGVPVDVVADETTGYRVSVEQLEAARTERTKVVLFVSPSNPTGSVYSEADAKAIGEWAAEHGLWVLTDEIYEHLVYGEAKFTSLPVLVPALRDKCIIVNGVAKTYAMTGWRVGWVIAPQDV---IKAATNLQSHATS 267          
BLAST of CX298057 vs. ExPASy Swiss-Prot
Match: AAT_THEMA (Aspartate aminotransferase OS=Thermotoga maritima GN=aspC PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.206e-29
Identity = 67/222 (30.18%), Postives = 123/222 (55.41%), Query Frame = 2
Query:   14 DAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCI-TLRPPEFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATST 676
            + A++ ++ G+ +Y    G+ E    IA R  +    ++ P+ +V VT+G  +A+    + L++PGDEVI+F+P + SY   + +AG  +  + T     F   +EE++  +   T+A+L+N+P+NPTG ++ RE L  +  L  + +  + SDEVYD L +  +  SI  +   ++R V +N   K+ S+TGW++G+ I+   +   V +  S  T   +T
Sbjct:   49 EEAVRFLQKGEVKYTDPRGIYELREGIAKRIGERYKKDISPD-QVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVGKTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGYLISSEKVATAVSKIQSHTTSCINT 269          
BLAST of CX298057 vs. ExPASy Swiss-Prot
Match: AATA_RHIME (Aspartate aminotransferase A OS=Rhizobium meliloti GN=aatA PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 3.763e-29
Identity = 67/207 (32.37%), Postives = 118/207 (57.00%), Query Frame = 2
Query:   17 AAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPE-FAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIEND-VLVFSDEVYDKLAFEMDHIS--IASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHL 625
            AAI AI  G+ +Y    G+PE   AIA +FK+++ L+    + +  T G  + +    +  +NPGDEV++ AP++ SY   +++ G     +  R    F +  E+L   I+  T+  + N+P NP+G  ++ EEL  +  + +++  V V +D++Y+ L +     +  +   PG+YERT+TMN + K +++TGW+IG+A  P HL
Sbjct:   52 AAIDAIDRGETKYTPVSGIPELREAIAKKFKRENNLDYTAAQTIVGTGG-KQILFNAFMATLNPGDEVVIPAPYWVSYPEMVALCGGTPVFVPTRQENNFKLKAEDLDRAITPKTKWFVFNSPSNPSGAAYSHEELKALTDVLMKHPHVWVLTDDMYEHLTYGDFRFATPVEVEPGLYERTLTMNGVSKAYAMTGWRIGYAAGPLHL 257          
BLAST of CX298057 vs. ExPASy Swiss-Prot
Match: AAT_RHILP (Aspartate aminotransferase OS=Rhizobium leguminosarum bv. phaseoli GN=aspC PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.095e-28
Identity = 66/207 (31.88%), Postives = 120/207 (57.97%), Query Frame = 2
Query:   17 AAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSM-AGAKIKCITLRPPEFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIEN-DVLVFSDEVYDKLAF-EMDHISIASL-PGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHL 625
            AAI AI  G+ +Y    G+PE   AIA++FK+++GL+   E+ +  T G  + +    +  +NPGDEV + AP++ SY   +++  G +      +   F +   +L+  I+  T+  + N+P NPTG  +T +EL  +  + ++N  V V +D++Y+ L + +   ++   + P +Y+RT+TMN + K +++TGW+IG+A  P  L
Sbjct:   52 AAIDAINRGETKYTPVSGIPELRKAIAAKFKRENGLDYSWEQTIVGTGG-KQILFNAFMATLNPGDEVSIPAPYWVSYPEMVALCGGTRFFVSATQEHNFKLQAADLEKAITPKTKWFIFNSPSNPTGAAYTHDELKALTDVLMKNPQVWVLTDDMYEHLTYGDFKFVTPVEVEPQLYDRTLTMNGVSKAYAMTGWRIGYAAGPIQL 257          
BLAST of CX298057 vs. ExPASy Swiss-Prot
Match: AAT_SULTO (Aspartate aminotransferase OS=Sulfolobus tokodaii GN=aspC PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.868e-28
Identity = 70/203 (34.48%), Postives = 110/203 (54.19%), Query Frame = 2
Query:   14 DAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPE---FAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIA 613
            +AA +++ +G   Y   +G+ E    IA      S  E   ++EV VT G   A+    L  INPGDEVI+F P + SY   + M G     + ++  E   F++ + EL+S I+K T+ I++N PHNPTG +F   E+  +  +  E  VL+ SDE+YD   +E    S+   P   +  + +N   KTFS+TGW++G+ +A
Sbjct:   54 EAAKKSLDEGFTGYTSAYGIDELRQKIAEHLS--SKYESVRKEEVIVTPGAKTALYLAFLLYINPGDEVIIFDPSFYSYAEVVKMLGGVPVYVKMKFNESTGFSLNLSELESKINKKTKMIVLNNPHNPTGMVFDPIEIEKLMEITKEKKVLLLSDEIYDYFIYEGKMKSVLEDPDWRDYVIYVNGFSKTFSMTGWRLGYVVA 254          
BLAST of CX298057 vs. ExPASy Swiss-Prot
Match: AAT_SULAC (Aspartate aminotransferase OS=Sulfolobus acidocaldarius GN=aspC PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.186e-28
Identity = 64/203 (31.53%), Postives = 110/203 (54.19%), Query Frame = 2
Query:   14 DAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPE---FAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIA 613
            D A +A+  G   Y   +G+ E  + IAS         +   KEV +T G   ++    L  +NPGDEVI+F P Y SY   + M G K   + ++  E   F++ + +L++ I+  T+ +++N PHNPTG +F  +E++ +  +    +++V SDE+YD   +E    S+   P     ++ +N   KTFS+TGW++G+ +A
Sbjct:   54 DEAKKALDGGFTAYTSAYGIDELRAKIASFLSSKYNTNIS-SKEVIITPGAKVSLYLAFLLYVNPGDEVIIFDPSYYSYPEVVKMLGGKPVYVKMKWREDTGFSLNLNDLENKITDKTKMVVLNNPHNPTGMVFDPKEIDQLIEIAKSKNLIVLSDEIYDYFVYEGKMRSVLEDPDWKNFSIYVNGFSKTFSMTGWRLGYVVA 255          
BLAST of CX298057 vs. ExPASy Swiss-Prot
Match: AAT_SULSO (Aspartate aminotransferase OS=Sulfolobus solfataricus GN=aspC PE=1 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 1.581e-27
Identity = 70/203 (34.48%), Postives = 105/203 (51.72%), Query Frame = 2
Query:   14 DAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITL---RPPEFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIA 613
            DAA +A+  G   Y    G+ E    IA       G +V  E EV VT G   A+    +  INP DEVIL  P + SY   + + G K     L   R   F+I +++L+S ISK T+ I+ N PHNPTG +F+  ++  I  +  +N +++ SDE+YD   +E    S        +  + +N   KTFS+TGW++G+ +A
Sbjct:   55 DAAKEALDQGFTFYTSAFGIDELREKIAQYLNTRYGTDVKKE-EVIVTPGAKPALFLVFILYINPSDEVILPDPSFYSYAEVVKLLGGKPIYANLKWSREEGFSIDVDDLQSKISKRTKMIVFNNPHNPTGTLFSPNDVKKIVDISRDNKIILLSDEIYDNFVYEGKMRSTLEDSDWRDFLIYVNGFSKTFSMTGWRLGYIVA 256          
BLAST of CX298057 vs. ExPASy Swiss-Prot
Match: AAT_PYRHO (Aspartate aminotransferase OS=Pyrococcus horikoshii GN=aspC PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.522e-27
Identity = 71/216 (32.87%), Postives = 114/216 (52.78%), Query Frame = 2
Query:   14 DAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPEFAIPI-EELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFL 658
            +AA +A+ +G   Y    G+PE   A+   +KK  G++++ E  V +T+G  E        L+  GDEVI+  P + SY     +A AK   I LR     +P   EL   ISKNTR I++N P+NPTG    +E    IA +  + ++ + SDE Y+   +E D      +    E T+  NS  KTF++TGW++G+ +AP  +   + + H+++
Sbjct:   52 EAAKRALDEGWTHYTPNAGIPELREAVVEYYKKFYGIDIEVEN-VIITAGAYEGTYLAFESLLERGDEVIIPDPAFVSYAEDAKVAEAKPVRIPLREENNFLPDPNELLEKISKNTRMIVINYPNNPTGATLDKELAKTIADIAEDYNIYILSDEPYEHFIYE-DAKHYPMIKFAPENTILANSFSKTFAMTGWRLGFVVAPSQVIKEMTKLHAYV 265          
The following BLAST results are available for this feature:
BLAST of CX298057 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 102
Match NameE-valueIdentityDescription
PATA_BACSU1.058e-3132.39Putative aminotransferase A OS=Bacillus subtilis G... [more]
AAT_AQUAE5.251e-3132.37Aspartate aminotransferase OS=Aquifex aeolicus GN=... [more]
AAT_STRVG5.806e-3030.80Aspartate aminotransferase OS=Streptomyces virgini... [more]
AAT_THEMA2.206e-2930.18Aspartate aminotransferase OS=Thermotoga maritima ... [more]
AATA_RHIME3.763e-2932.37Aspartate aminotransferase A OS=Rhizobium meliloti... [more]
AAT_RHILP1.095e-2831.88Aspartate aminotransferase OS=Rhizobium leguminosa... [more]
AAT_SULTO1.868e-2834.48Aspartate aminotransferase OS=Sulfolobus tokodaii ... [more]
AAT_SULAC3.186e-2831.53Aspartate aminotransferase OS=Sulfolobus acidocald... [more]
AAT_SULSO1.581e-2734.48Aspartate aminotransferase OS=Sulfolobus solfatari... [more]
AAT_PYRHO3.522e-2732.87Aspartate aminotransferase OS=Pyrococcus horikoshi... [more]

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Properties
Property NameValue
Genbank descriptionC06008B06SK RindPdig24 Citrus clementina cDNA clone C06008B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX298057 ID=CX298057; Name=CX298057; organism=Citrus clementina; type=EST; length=677bp
AGGATTTTGTTAAGATGCAGCGATTCAAGCCATAAGGGATGGGAAGAATC
AATATGCTCGTGGACATGGGGTTCCAGAGTTCAACTCTGCCATTGCTTCC
CGGTTTAAGAAAGATTCTGGGCTCGAGGTTGACCCTGAAAAGGAAGTTAC
TGTTACCTCTGGGTGCACCGAAGCCATTGCTGCAACCATCTTAGGTTTGA
TTAATCCTGGAGATGAGGTGATCCTTTTTGCACCTTTCTATGATTCCTAT
GAAGCTACTCTCTCCATGGCTGGTGCTAAAATTAAATGCATCACATTGCG
CCCTCCAGAATTTGCCATCCCCATTGAAGAGCTCAAGTCTACAATCTCAA
AAAATACTCGTGCAATTCTTATGAACACTCCACATAACCCCACTGGAAAG
ATGTTCACTAGGGAGGAACTTAATGTTATTGCATCTCTTTGCATTGAGAA
TGATGTGTTGGTTTTTAGTGATGAGGTCTATGATAAGTTGGCTTTTGAAA
TGGATCACATTTCCATAGCCTCTCTTCCTGGAATGTATGAGCGTACTGTA
ACCATGAATTCCTTAGGGAAGACATTCTCTTTAACAGGGTGGAAGATCGG
GTGGGCAATAGCTCCACCGCACCTTACATGGGGGGTGCGGCAGGCACACT
CTTTTCTCACGTTTGCCACATCCACTC
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