CX298061

Overview
NameCX298061
Unique NameCX298061
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length730
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX298061 vs. ExPASy Swiss-Prot
Match: HSP82_TOBAC (Heat shock protein 82 (Fragment) OS=Nicotiana tabacum GN=HSP82 PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 4.152e-48
Identity = 98/208 (47.12%), Postives = 143/208 (68.75%), Query Frame = 2
Query:    8 FITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDT-----KDKELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNI 616
            +ITG +K+ +E SPFLERLKKK YEV++  D +DEY +  L +Y+ KK  + +KEGLKL  D+     K +E K+SF+ L K  K  L  + V+ V VS+R+ ++PC +VT +YGW+ANMERIM++Q L D+S  +YM  K+ +EINP + I++ELR+R   D  D  V+    L+++TAL+ SGFSL+DP  FA+RI+  +K  L+I
Sbjct:  265 YITGESKKAVENSPFLERLKKKGYEVLYMVDAIDEYAVGQLKEYDGKKLVSATKEGLKLDDDSEEEKKKKEEKKKSFENLCKIIKDILG-DKVEKVVVSDRIVDSPCCLVTGEYGWTANMERIMKAQALRDSSMSSYMSSKKTMEINPDNGIMEELRKRAEADKNDKSVKDLVLLLFETALLTSGFSLDDPNTFAARIHRMLKLGLSI 471          
BLAST of CX298061 vs. ExPASy Swiss-Prot
Match: H90A1_DANRE (Heat shock protein HSP 90-alpha 1 OS=Danio rerio GN=hsp90a.1 PE=2 SV=3)

HSP 1 Score: 191.43 bits (485), Expect = 4.152e-48
Identity = 97/207 (46.86%), Postives = 138/207 (66.67%), Query Frame = 2
Query:    8 FITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDK----ELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNI 616
            +ITG  K+Q+  S F+ERL+K   EVI+  +P+DEY +Q L +Y+ K   +V+KEGL+L +D ++K    ELK  ++ L K  K  L  + ++ V VSNRL ++PC +VTS YGW+ANMERIM+SQ L D S   YM  K+ LEINP HPI++ LRE+   D  D  V+    L+++TAL+ SGF+L+DP+  A+RIY  +K  L I
Sbjct:  486 YITGETKDQVANSAFVERLRKAGLEVIYMIEPIDEYCVQQLKEYDGKNLVSVTKEGLELPEDEEEKKKQDELKAKYENLCKIMKDIL-DKKIEKVTVSNRLVSSPCCIVTSTYGWTANMERIMKSQALRDNSTMGYMTAKKHLEINPAHPIVETLREKAEADKNDKAVKDLVILLFETALLSSGFTLDDPQTHANRIYRMIKLGLGI 691          
BLAST of CX298061 vs. ExPASy Swiss-Prot
Match: HS90B_RAT (Heat shock protein HSP 90-beta OS=Rattus norvegicus GN=Hsp90ab1 PE=1 SV=4)

HSP 1 Score: 191.045 bits (484), Expect = 5.422e-48
Identity = 94/207 (45.41%), Postives = 140/207 (67.63%), Query Frame = 2
Query:    8 FITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDK----ELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNI 616
            +ITG +KEQ+  S F+ER++K+ +EV++ T+P+DEY +Q L +++ K   +V+KEGL+L +D ++K    E K  F+ L K  K  L  + V+ V +SNRL ++PC +VTS YGW+ANMERIM++Q L D S   YM  K+ LEINP HPI++ LR++   D  D  V+    L+++TAL+ SGFSL DP+  ++RIY  +K  L I
Sbjct:  485 YITGESKEQVANSAFVERVRKRGFEVVYMTEPIDEYCVQQLKEFDGKSLVSVTKEGLELPEDEEEKKKMEESKAKFENLCKLMKEIL-DKKVEKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGI 690          
BLAST of CX298061 vs. ExPASy Swiss-Prot
Match: HS90B_MACFA (Heat shock protein HSP 90-beta OS=Macaca fascicularis GN=Hsp90ab1 PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 5.422e-48
Identity = 94/207 (45.41%), Postives = 140/207 (67.63%), Query Frame = 2
Query:    8 FITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDK----ELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNI 616
            +ITG +KEQ+  S F+ER++K+ +EV++ T+P+DEY +Q L +++ K   +V+KEGL+L +D ++K    E K  F+ L K  K  L  + V+ V +SNRL ++PC +VTS YGW+ANMERIM++Q L D S   YM  K+ LEINP HPI++ LR++   D  D  V+    L+++TAL+ SGFSL DP+  ++RIY  +K  L I
Sbjct:  485 YITGESKEQVANSAFVERVRKRGFEVVYMTEPIDEYCVQQLKEFDGKSLVSVTKEGLELPEDEEEKKKMEESKAKFENLCKLMKEIL-DKKVEKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGI 690          
BLAST of CX298061 vs. ExPASy Swiss-Prot
Match: HS90B_HUMAN (Heat shock protein HSP 90-beta OS=Homo sapiens GN=HSP90AB1 PE=1 SV=4)

HSP 1 Score: 191.045 bits (484), Expect = 5.422e-48
Identity = 94/207 (45.41%), Postives = 140/207 (67.63%), Query Frame = 2
Query:    8 FITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDK----ELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNI 616
            +ITG +KEQ+  S F+ER++K+ +EV++ T+P+DEY +Q L +++ K   +V+KEGL+L +D ++K    E K  F+ L K  K  L  + V+ V +SNRL ++PC +VTS YGW+ANMERIM++Q L D S   YM  K+ LEINP HPI++ LR++   D  D  V+    L+++TAL+ SGFSL DP+  ++RIY  +K  L I
Sbjct:  485 YITGESKEQVANSAFVERVRKRGFEVVYMTEPIDEYCVQQLKEFDGKSLVSVTKEGLELPEDEEEKKKMEESKAKFENLCKLMKEIL-DKKVEKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGI 690          
BLAST of CX298061 vs. ExPASy Swiss-Prot
Match: HS90B_HORSE (Heat shock protein HSP 90-beta OS=Equus caballus GN=HSP90AB1 PE=2 SV=3)

HSP 1 Score: 191.045 bits (484), Expect = 5.422e-48
Identity = 94/207 (45.41%), Postives = 140/207 (67.63%), Query Frame = 2
Query:    8 FITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDK----ELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNI 616
            +ITG +KEQ+  S F+ER++K+ +EV++ T+P+DEY +Q L +++ K   +V+KEGL+L +D ++K    E K  F+ L K  K  L  + V+ V +SNRL ++PC +VTS YGW+ANMERIM++Q L D S   YM  K+ LEINP HPI++ LR++   D  D  V+    L+++TAL+ SGFSL DP+  ++RIY  +K  L I
Sbjct:  485 YITGESKEQVANSAFVERVRKRGFEVVYMTEPIDEYCVQQLKEFDGKSLVSVTKEGLELPEDEEEKKKMEESKAKFENLCKLMKEIL-DKKVEKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGI 690          
BLAST of CX298061 vs. ExPASy Swiss-Prot
Match: HS90B_BOVIN (Heat shock protein HSP 90-beta OS=Bos taurus GN=HSP90AB1 PE=2 SV=3)

HSP 1 Score: 191.045 bits (484), Expect = 5.422e-48
Identity = 94/207 (45.41%), Postives = 140/207 (67.63%), Query Frame = 2
Query:    8 FITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDK----ELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNI 616
            +ITG +KEQ+  S F+ER++K+ +EV++ T+P+DEY +Q L +++ K   +V+KEGL+L +D ++K    E K  F+ L K  K  L  + V+ V +SNRL ++PC +VTS YGW+ANMERIM++Q L D S   YM  K+ LEINP HPI++ LR++   D  D  V+    L+++TAL+ SGFSL DP+  ++RIY  +K  L I
Sbjct:  485 YITGESKEQVANSAFVERVRKRGFEVVYMTEPIDEYCVQQLKEFDGKSLVSVTKEGLELPEDEEEKKKMEESKAKFENLCKLMKEIL-DKKVEKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGI 690          
BLAST of CX298061 vs. ExPASy Swiss-Prot
Match: HSC90_DICDI (Heat shock cognate 90 kDa protein OS=Dictyostelium discoideum GN=hspD PE=1 SV=2)

HSP 1 Score: 190.66 bits (483), Expect = 7.082e-48
Identity = 98/207 (47.34%), Postives = 142/207 (68.60%), Query Frame = 2
Query:    8 FITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKESFK----ELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNI 616
            +ITG +K+ +E SPF+E LKKKN EVI+  DP+DEY +Q L +Y+ KK  +++KEGLKL +   +K+  E  K    EL K  K  L  + V+ V +S RL N+PCV+VTS+YGWSANMERIM++Q L D+S  +YM  K+ LE+NP HPI+++L ++  +  +    +    L+Y+TAL+ SGFSL++P  FASRI+  +K  L+I
Sbjct:  461 YITGESKKAVENSPFIEGLKKKNLEVIYMCDPIDEYAVQQLKEYDGKKLVSITKEGLKLDETEDEKKKAEQDKAANEELLKQVKDVLG-DKVEKVVLSTRLANSPCVLVTSEYGWSANMERIMKAQALRDSSMSSYMSSKKTLELNPDHPIVRDLAKKAAE--KSKTFKDFVYLLYETALLTSGFSLDEPSSFASRIHRMIKLGLSI 664          
BLAST of CX298061 vs. ExPASy Swiss-Prot
Match: HSP82_MAIZE (Heat shock protein 82 OS=Zea mays GN=HSP82 PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 9.249e-48
Identity = 98/209 (46.89%), Postives = 142/209 (67.94%), Query Frame = 2
Query:    8 FITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDK------ELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNI 616
            +ITG +++ +E SPFLERLKKK YEV+F  D +DEY +  L +Y+ KK  + +KEGLKL  +  ++      E K+ F+EL K  K  L  + V+ V VS+R+ ++PC +VT +YGW+ANMERIM++Q L D+S  AYM  K+ +EINP + I++ELR+R   D  D  V+    L+++TAL+ SGFSL+DP  FA+RI+  +K  LNI
Sbjct:  479 YITGESRKAVENSPFLERLKKKGYEVLFMVDAIDEYAVGQLKEYDGKKLVSATKEGLKLDDEDDEEAKKRREERKKRFEELCKVIKDILG-DRVEKVVVSDRIVDSPCCLVTGEYGWTANMERIMKAQALRDSSMSAYMSSKKTMEINPDNGIMEELRKRAEADRNDKSVKDLVLLLFETALLTSGFSLDDPNTFAARIHRMLKLGLNI 686          
BLAST of CX298061 vs. ExPASy Swiss-Prot
Match: HSP81_ARATH (Heat shock protein 81-1 OS=Arabidopsis thaliana GN=HSP81-1 PE=1 SV=3)

HSP 1 Score: 189.889 bits (481), Expect = 1.208e-47
Identity = 96/208 (46.15%), Postives = 143/208 (68.75%), Query Frame = 2
Query:    8 FITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDK-----ELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNI 616
            +ITG +K+ +E SPFLERLKK+ YEV++  D +DEY +  L +Y+ KK  + +KEGLKL  +T+++     E K+SF+ L K  K  L  + V+ V VS+R+ ++PC +VT +YGW+ANMERIM++Q L D+S   YM  K+ +EINP + I++ELR+R   D  D  V+    L+Y+TAL+ SGFSL++P  FA+RI+  +K  L+I
Sbjct:  465 YITGESKKAVENSPFLERLKKRGYEVLYMVDAIDEYAVGQLKEYDGKKLVSATKEGLKLEDETEEEKKKREEKKKSFENLCKTIKEILG-DKVEKVVVSDRIVDSPCCLVTGEYGWTANMERIMKAQALRDSSMSGYMSSKKTMEINPDNGIMEELRKRAEADKNDKSVKDLVMLLYETALLTSGFSLDEPNTFAARIHRMLKLGLSI 671          
The following BLAST results are available for this feature:
BLAST of CX298061 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 363
Match NameE-valueIdentityDescription
HSP82_TOBAC4.152e-4847.12Heat shock protein 82 (Fragment) OS=Nicotiana taba... [more]
H90A1_DANRE4.152e-4846.86Heat shock protein HSP 90-alpha 1 OS=Danio rerio G... [more]
HS90B_RAT5.422e-4845.41Heat shock protein HSP 90-beta OS=Rattus norvegicu... [more]
HS90B_MACFA5.422e-4845.41Heat shock protein HSP 90-beta OS=Macaca fascicula... [more]
HS90B_HUMAN5.422e-4845.41Heat shock protein HSP 90-beta OS=Homo sapiens GN=... [more]
HS90B_HORSE5.422e-4845.41Heat shock protein HSP 90-beta OS=Equus caballus G... [more]
HS90B_BOVIN5.422e-4845.41Heat shock protein HSP 90-beta OS=Bos taurus GN=HS... [more]
HSC90_DICDI7.082e-4847.34Heat shock cognate 90 kDa protein OS=Dictyostelium... [more]
HSP82_MAIZE9.249e-4846.89Heat shock protein 82 OS=Zea mays GN=HSP82 PE=3 SV... [more]
HSP81_ARATH1.208e-4746.15Heat shock protein 81-1 OS=Arabidopsis thaliana GN... [more]

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Properties
Property NameValue
Genbank descriptionC06008B10SK RindPdig24 Citrus clementina cDNA clone C06008B10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX298061 ID=CX298061; Name=CX298061; organism=Citrus clementina; type=EST; length=730bp
GAGGCTTTTCATTACAGGCGCCAACAAGGAACAGTTGGAAAAGTCTCCAT
TCCTGGAGAGGCTTAAGAAGAAGAACTATGAGGTGATTTTCTTCACTGAT
CCAGTTGATGAATACCTGATGCAATACCTGATGGATTATGAAGACAAAAA
GTTCCAAAATGTATCCAAAGAGGGTCTTAAACTTGGTAAAGACACTAAAG
ATAAGGAACTTAAGGAGTCATTCAAGGAGCTCACGAAATGGTGGAAGGGT
GCTCTTGCCAGCGAGAACGTGGATGATGTGAAAGTAAGCAACCGCTTGGA
TAACACCCCTTGCGTAGTTGTGACATCAAAGTATGGTTGGAGTGCGAATA
TGGAGAGGATCATGCAGTCTCAGACTCTCTCAGATGCTAGCAAGCAAGCA
TATATGCGGGGCAAGAGGGTGCTTGAAATCAATCCAAGGCATCCAATCAT
CAAAGAGCTCCGGGAGAGAGTCGTCAAGGACCCTGAGGATGCGGGTGTCC
AGCAAACAGCCCAACTCATTTACCAGACGGCACTCATGGAGAGTGGCTTT
TCGCTCAATGATCCCAAGGATTTTGCCTCCCGAATTTACAGCACGGTGAA
ATCTAGCCTTAACATTAGCCCTGATGCAGCTGTTGAGGAGGAAGATGATG
TAGAAGAGACTGATGCTGACACTGAAATGAAAGAATCTTCGGCTGCCAAG
AGGACGTGGATACAGAGTATTCTGGCAGGA
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