CX298061

Overview
NameCX298061
Unique NameCX298061
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length730
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX298061 vs. ExPASy Swiss-Prot
Match: HSP90_CAEBR (Heat shock protein 90 OS=Caenorhabditis briggsae GN=daf-21 PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.578e-47
Identity = 98/207 (47.34%), Postives = 141/207 (68.12%), Query Frame = 2
Query:    8 FITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDK----ELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNI 616
            +ITG +KE +  S F+ER+K + +EV++  DP+DEY +Q L +Y+ KK  +V+KEGL+L +  ++K    E K +++ L K  K  L  + ++ V VSNRL ++PC +VTS+YGWSANMERIM++Q L D+S   YM  K+ LEINP H I+K LRERV  D  D  V+    L+++TAL+ SGFSL +P+  ASRIY  +K  L+I
Sbjct:  467 YITGESKEVVAASAFVERVKSRGFEVLYMCDPIDEYCVQQLKEYDGKKLVSVTKEGLELPETEEEKKKFEEDKVAYENLCKVIKDIL-EKKIEKVAVSNRLVSSPCCIVTSEYGWSANMERIMKAQALRDSSTMGYMAAKKHLEINPDHAIMKTLRERVEADKNDKTVKDLVVLLFETALLSSGFSLEEPQSHASRIYRMIKLGLDI 672          
BLAST of CX298061 vs. ExPASy Swiss-Prot
Match: HSP83_IPONI (Heat shock protein 83 OS=Ipomoea nil GN=HSP83A PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.578e-47
Identity = 97/208 (46.63%), Postives = 142/208 (68.27%), Query Frame = 2
Query:    8 FITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDK-----ELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNI 616
            +ITG +K+ +E SPFLERLKKK YEV+F  D +DEY +  L +Y+ KK  + +KEGLKL  D +++     E K+SF+ L K  K  L  + V+ V VS+R+ ++PC +VT +YGW+ANMERIM++Q L D+S  +YM  K+ +EINP + I++ELR+R   D  D  V+    L+++TAL+ SGFSL+DP  F +RI+  +K  L+I
Sbjct:  469 YITGESKKAVENSPFLERLKKKGYEVLFMVDAIDEYAVGQLKEYDGKKLVSATKEGLKLEDDDEEEKKKREEKKKSFENLCKIIKDILG-DKVEKVVVSDRIVDSPCCLVTGEYGWTANMERIMKAQALRDSSMSSYMSSKKTMEINPDNGIMEELRKRAEADKNDKSVKDLVLLLFETALLTSGFSLDDPNTFGARIHRMLKLGLSI 675          
BLAST of CX298061 vs. ExPASy Swiss-Prot
Match: HSP81_ORYSJ (Heat shock protein 81-1 OS=Oryza sativa subsp. japonica GN=HSP81-1 PE=2 SV=2)

HSP 1 Score: 189.119 bits (479), Expect = 2.060e-47
Identity = 97/207 (46.86%), Postives = 140/207 (67.63%), Query Frame = 2
Query:    8 FITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDK----ELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNI 616
            +ITG +K+ +E SPFLE+LKKK YEV++  D +DEY +  L ++E KK  + +KEGLKL +   +K    ELKE F+ L K  K  L  + V+ V VS+R+ ++PC +VT +YGW+ANMERIM++Q L D+S   YM  K+ +EINP + I++ELR+R   D  D  V+    L+++TAL+ SGFSL+DP  F SRI+  +K  L+I
Sbjct:  466 YITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKRKEELKEKFEGLCKVIKEVLG-DKVEKVVVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPENAIMEELRKRADADKNDKSVKDLVLLLFETALLTSGFSLDDPNTFGSRIHRMLKLGLSI 671          
BLAST of CX298061 vs. ExPASy Swiss-Prot
Match: HSP81_ORYSI (Heat shock protein 81-1 OS=Oryza sativa subsp. indica GN=HSP81-1 PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.060e-47
Identity = 97/207 (46.86%), Postives = 140/207 (67.63%), Query Frame = 2
Query:    8 FITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDK----ELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNI 616
            +ITG +K+ +E SPFLE+LKKK YEV++  D +DEY +  L ++E KK  + +KEGLKL +   +K    ELKE F+ L K  K  L  + V+ V VS+R+ ++PC +VT +YGW+ANMERIM++Q L D+S   YM  K+ +EINP + I++ELR+R   D  D  V+    L+++TAL+ SGFSL+DP  F SRI+  +K  L+I
Sbjct:  466 YITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKRKEELKEKFEGLCKVIKEVLG-DKVEKVVVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPENAIMEELRKRADADKNDKSVKDLVLLLFETALLTSGFSLDDPNTFGSRIHRMLKLGLSI 671          
BLAST of CX298061 vs. ExPASy Swiss-Prot
Match: HS90B_MOUSE (Heat shock protein HSP 90-beta OS=Mus musculus GN=Hsp90ab1 PE=1 SV=2)

HSP 1 Score: 189.119 bits (479), Expect = 2.060e-47
Identity = 93/207 (44.93%), Postives = 139/207 (67.15%), Query Frame = 2
Query:    8 FITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDK----ELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNI 616
            +ITG +KEQ+    F+ER++K+ +EV++ T+P+DEY +Q L +++ K   +V+KEGL+L +D ++K    E K  F+ L K  K  L  + V+ V +SNRL ++PC +VTS YGW+ANMERIM++Q L D S   YM  K+ LEINP HPI++ LR++   D  D  V+    L+++TAL+ SGFSL DP+  ++RIY  +K  L I
Sbjct:  485 YITGESKEQVANPAFVERVRKRGFEVVYMTEPIDEYCVQQLKEFDGKSLVSVTKEGLELPEDEEEKKKMEESKAKFENLCKLMKEIL-DKKVEKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGI 690          
BLAST of CX298061 vs. ExPASy Swiss-Prot
Match: HSP83_LEIIN (Heat shock protein 83-1 OS=Leishmania infantum GN=HSP83-1 PE=3 SV=2)

HSP 1 Score: 187.963 bits (476), Expect = 4.590e-47
Identity = 93/207 (44.93%), Postives = 140/207 (67.63%), Query Frame = 2
Query:    8 FITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKESFK----ELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNI 616
            +ITG +K++LE SPF+E+ K++  EV+F T+P+DEY+MQ + D+EDKKF  ++KEG+   +  ++K+ +E  K    +L K  K  L  + V+ V VS  L  +PC++VTS++GWSA+ME+IM++Q L D+S   YM  K+ +E+NPRHPIIKELR RV  D  D  V+    L++ T+L+ SGF L DP  +A RI   +K  L++
Sbjct:  464 YITGDSKKKLESSPFIEQAKRRGLEVLFMTEPIDEYVMQQVKDFEDKKFACLTKEGVHFEESEEEKQQREEEKAACEKLCKTMKEVLG-DKVEKVIVSECLSTSPCILVTSEFGWSAHMEQIMRNQALRDSSMAQYMMSKKTMELNPRHPIIKELRRRVDADENDKAVKDLVFLLFDTSLLTSGFQLEDPTGYAERINRMIKLGLSL 669          
BLAST of CX298061 vs. ExPASy Swiss-Prot
Match: HS90B_CHICK (Heat shock cognate protein HSP 90-beta OS=Gallus gallus GN=HSP90AB1 PE=2 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 4.590e-47
Identity = 93/207 (44.93%), Postives = 140/207 (67.63%), Query Frame = 2
Query:    8 FITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDK----ELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNI 616
            +ITG +KEQ+  S F+ER++K+ +EV++ T+P+DEY +Q L +++ K   +V+KEGL+L +D ++K    E K  F+ L K  K  L  + V+ V +SNRL ++PC +VTS YGW+ANMERIM++Q L D S   YM  K+ LEINP HPI++ LR++   +  D  V+    L+++TAL+ SGFSL DP+  ++RIY  +K  L I
Sbjct:  486 YITGESKEQVANSAFVERVRKRGFEVVYMTEPIDEYCVQQLKEFDGKTLVSVTKEGLELPEDEEEKKNMEESKAKFETLCKLMKEIL-DKKVEKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKADANKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGI 691          
BLAST of CX298061 vs. ExPASy Swiss-Prot
Match: ENPL_BOVIN (Endoplasmin OS=Bos taurus GN=HSP90B1 PE=2 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 4.590e-47
Identity = 93/212 (43.87%), Postives = 136/212 (64.15%), Query Frame = 2
Query:    8 FITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKES----FKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQS---QTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNISP 622
            F+ GA++++ E SPF+ERL KK YEVI+ T+PVDEY +Q L +++ K+FQNV+KEG+K  +  K KE +E+    F+ L  W K     + ++   VS RL  +PC +V S+YGWS NMERIM++   QT  D S   Y   K+  EINPRHP+I+++  RV +D +D  V   A ++++TA + SG+ L D K +  RI   ++ SLNI P
Sbjct:  540 FMAGASRKEAESSPFVERLLKKGYEVIYLTEPVDEYCIQALPEFDGKRFQNVAKEGVKFDESEKSKESREAVEKEFEPLLNWMKDKALKDKIEKAVVSQRLTESPCALVASQYGWSGNMERIMKAQAYQTGKDISTNYYASQKKTFEINPRHPLIRDMLRRVKEDEDDKTVSDLAVVLFETATLRSGYLLPDTKAYGDRIERMLRLSLNIDP 751          
BLAST of CX298061 vs. ExPASy Swiss-Prot
Match: HSP83_ORYSJ (Heat shock protein 81-3 OS=Oryza sativa subsp. japonica GN=HSP81-3 PE=2 SV=2)

HSP 1 Score: 187.578 bits (475), Expect = 5.995e-47
Identity = 96/207 (46.38%), Postives = 138/207 (66.67%), Query Frame = 2
Query:    8 FITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDK----ELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNI 616
            +ITG +K+ +E SPFLE+LKKK YEV++  D +DEY +  L ++E KK  + +KEGLKL +   +K    ELKE F+ L K  K  L  + V+ V VS+R+ ++PC +VT +YGW+ANMERIM++Q L D+S   YM  K+ +EINP + I+ ELR+R   D  D  V+    L+++TAL+ SGFSL DP  F +RI+  +K  L+I
Sbjct:  466 YITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKRQEELKEKFEGLCKVIKEVLG-DKVEKVVVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPENAIMDELRKRADADKNDKSVKDLVMLLFETALLTSGFSLEDPNTFGTRIHRMLKLGLSI 671          
BLAST of CX298061 vs. ExPASy Swiss-Prot
Match: HSP83_LEIDO (Heat shock protein 83 (Fragment) OS=Leishmania donovani GN=HSP83 PE=2 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 5.995e-47
Identity = 91/207 (43.96%), Postives = 141/207 (68.12%), Query Frame = 2
Query:    8 FITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKESFK----ELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNI 616
            +ITG +K++LE SPF+E+ +++  EV+F T+P+DEY+MQ + D+EDKKF  ++KEG+   +  ++K+ +E  K    +  K  K  L  + V+ V VS+RL  +PC++VTS++GWSA+ME+IM++Q + D+S  AYM  K+ +E+NPRHPIIK LR RV  D  D  V+    L++ T+L+ SGF L DP  +A RI   +K  L++
Sbjct:  217 YITGDSKKKLESSPFIEQARRRGLEVLFMTEPIDEYVMQQVKDFEDKKFACLTKEGVHFEESEEEKQQREEEKAACEKRCKTMKEVLG-DKVEKVTVSDRLSTSPCILVTSEFGWSAHMEQIMRNQAVRDSSMSAYMMSKKTMELNPRHPIIKVLRRRVEADENDKAVKDLVFLLFDTSLLTSGFQLEDPTGYAKRINRMIKLGLSL 422          
The following BLAST results are available for this feature:
BLAST of CX298061 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 363
Match NameE-valueIdentityDescription
HSP90_CAEBR1.578e-4747.34Heat shock protein 90 OS=Caenorhabditis briggsae G... [more]
HSP83_IPONI1.578e-4746.63Heat shock protein 83 OS=Ipomoea nil GN=HSP83A PE=... [more]
HSP81_ORYSJ2.060e-4746.86Heat shock protein 81-1 OS=Oryza sativa subsp. jap... [more]
HSP81_ORYSI2.060e-4746.86Heat shock protein 81-1 OS=Oryza sativa subsp. ind... [more]
HS90B_MOUSE2.060e-4744.93Heat shock protein HSP 90-beta OS=Mus musculus GN=... [more]
HSP83_LEIIN4.590e-4744.93Heat shock protein 83-1 OS=Leishmania infantum GN=... [more]
HS90B_CHICK4.590e-4744.93Heat shock cognate protein HSP 90-beta OS=Gallus g... [more]
ENPL_BOVIN4.590e-4743.87Endoplasmin OS=Bos taurus GN=HSP90B1 PE=2 SV=1[more]
HSP83_ORYSJ5.995e-4746.38Heat shock protein 81-3 OS=Oryza sativa subsp. jap... [more]
HSP83_LEIDO5.995e-4743.96Heat shock protein 83 (Fragment) OS=Leishmania don... [more]

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Properties
Property NameValue
Genbank descriptionC06008B10SK RindPdig24 Citrus clementina cDNA clone C06008B10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX298061 ID=CX298061; Name=CX298061; organism=Citrus clementina; type=EST; length=730bp
GAGGCTTTTCATTACAGGCGCCAACAAGGAACAGTTGGAAAAGTCTCCAT
TCCTGGAGAGGCTTAAGAAGAAGAACTATGAGGTGATTTTCTTCACTGAT
CCAGTTGATGAATACCTGATGCAATACCTGATGGATTATGAAGACAAAAA
GTTCCAAAATGTATCCAAAGAGGGTCTTAAACTTGGTAAAGACACTAAAG
ATAAGGAACTTAAGGAGTCATTCAAGGAGCTCACGAAATGGTGGAAGGGT
GCTCTTGCCAGCGAGAACGTGGATGATGTGAAAGTAAGCAACCGCTTGGA
TAACACCCCTTGCGTAGTTGTGACATCAAAGTATGGTTGGAGTGCGAATA
TGGAGAGGATCATGCAGTCTCAGACTCTCTCAGATGCTAGCAAGCAAGCA
TATATGCGGGGCAAGAGGGTGCTTGAAATCAATCCAAGGCATCCAATCAT
CAAAGAGCTCCGGGAGAGAGTCGTCAAGGACCCTGAGGATGCGGGTGTCC
AGCAAACAGCCCAACTCATTTACCAGACGGCACTCATGGAGAGTGGCTTT
TCGCTCAATGATCCCAAGGATTTTGCCTCCCGAATTTACAGCACGGTGAA
ATCTAGCCTTAACATTAGCCCTGATGCAGCTGTTGAGGAGGAAGATGATG
TAGAAGAGACTGATGCTGACACTGAAATGAAAGAATCTTCGGCTGCCAAG
AGGACGTGGATACAGAGTATTCTGGCAGGA
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