CX298061

Overview
NameCX298061
Unique NameCX298061
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length730
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX298061 vs. ExPASy Swiss-Prot
Match: HSP90_EIMTE (Heat shock protein 90 OS=Eimeria tenella GN=HSP90 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.290e-45
Identity = 90/207 (43.48%), Postives = 139/207 (67.15%), Query Frame = 2
Query:    8 FITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDK----ELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNI 616
            +ITG +++ +  SPFLE+L KK YEV++ TDP+DEY +Q L ++++ K +  +KEGL++ +  ++K    ELK  F+ L K  K  L  + VD V +SNR+ ++PCV+VT+++GWSANMERIM++Q L D S  +YM  K+ +E+N  H I+ E++ +   D  D  V+    L+Y TAL+ SGFSL +P  FA+RI+  +K  L+I
Sbjct:  477 YITGESRQTVANSPFLEKLTKKGYEVLYMTDPIDEYAVQQLKEFDNHKLRCCTKEGLEIDESEEEKKKFEELKAEFEPLLKLIKEVL-HDKVDKVVLSNRITDSPCVLVTTEFGWSANMERIMKAQALRDNSMTSYMVSKKTMEVNGHHSIMIEIKNKAAVDKSDKTVKDLIWLLYDTALLTSGFSLEEPTQFAARIHRMIKLGLSI 682          
BLAST of CX298061 vs. ExPASy Swiss-Prot
Match: HSP90_SCHPO (Heat shock protein 90 homolog OS=Schizosaccharomyces pombe GN=swo1 PE=1 SV=2)

HSP 1 Score: 179.874 bits (455), Expect = 1.250e-44
Identity = 89/208 (42.79%), Postives = 140/208 (67.31%), Query Frame = 2
Query:    8 FITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDK----ELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKD-PEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNI 616
            FITG +K+ +E SPFLE  + K ++V+F  DP+DEY +  L ++E KK  N++K+GL+L +  ++K    +L++ ++E  K  K  L  + V+ V VSN++  +PC++ T +YGWSANMERIM++Q L D S  AYM  ++  EINP+ PII EL+++V ++  ED  V+  A ++Y+TAL+ SGF+L+DP  +A RI   +   L+I
Sbjct:  468 FITGESKQAVENSPFLEIFRAKKFDVLFMVDPIDEYAVTQLKEFEGKKLVNITKDGLELEETDEEKAAREKLEKEYEEFAKQLKTILG-DKVEKVVVSNKIVGSPCLLTTGQYGWSANMERIMKAQALRDTSMSAYMSSRKTFEINPKSPIIAELKKKVEENGAEDRSVKDLATILYETALLSSGFTLDDPSAYAQRINRLISLGLSI 674          
BLAST of CX298061 vs. ExPASy Swiss-Prot
Match: ENPL_RABIT (Endoplasmin (Fragment) OS=Oryctolagus cuniculus GN=HSP90B1 PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 4.750e-44
Identity = 93/212 (43.87%), Postives = 139/212 (65.57%), Query Frame = 2
Query:    8 FITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKES----FKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQS---QTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNISP 622
            F+ GA++++ E SPF+ERL KK YEVI+ T+PVDEY +Q L +++ K+FQNV+KEG+K  +  K KE +E+    F+ L  W K     + ++   VS RL  +PC +V S+YGWSANMERIM++   QT  D++K  Y   ++  EINPRHP+I+++  R+ +D  D  V   A ++++TA++ SG+ L D K +  RI   V+ SLNI P
Sbjct:  459 FMAGASRKEAESSPFVERLLKKGYEVIYLTEPVDEYCIQALPEFDGKRFQNVAKEGVKFDESEKTKESREATEKEFEPLLNWMKDKALKDKIEKAVVSQRLTESPCALVASQYGWSANMERIMKAQAYQTGKDSTK--YYASQKTFEINPRHPLIRDML-RIKED--DKTVMDLAVVLFETAILRSGYLLPDTKAYGDRIERIVRLSLNIDP 665          
BLAST of CX298061 vs. ExPASy Swiss-Prot
Match: HSP82_YEAST (ATP-dependent molecular chaperone HSP82 OS=Saccharomyces cerevisiae GN=HSP82 PE=1 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.689e-41
Identity = 93/208 (44.71%), Postives = 137/208 (65.87%), Query Frame = 2
Query:    8 FITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSK----EGLKLGKDTKDKELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVK-DPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNI 616
            +ITG + + +EKSPFL+ LK KN+EV+F TDP+DEY    L ++E K   +++K    E     K  ++KE+KE ++ LTK  K  L  + V+ V VS +L + P  + T ++GWSANMERIM++Q L D+S  +YM  K+  EI+P+ PIIKEL++RV +   +D  V+   +L+Y+TAL+ SGFSL++P  FASRI   +   LNI
Sbjct:  473 YITGESLKAVEKSPFLDALKAKNFEVLFLTDPIDEYAFTQLKEFEGKTLVDITKDFELEETDEEKAEREKEIKE-YEPLTKALKEILGDQ-VEKVVVSYKLLDAPAAIRTGQFGWSANMERIMKAQALRDSSMSSYMSSKKTFEISPKSPIIKELKKRVDEGGAQDKTVKDLTKLLYETALLTSGFSLDEPTSFASRINRLISLGLNI 678          
BLAST of CX298061 vs. ExPASy Swiss-Prot
Match: HSP90_CANAL (Heat shock protein 90 homolog OS=Candida albicans GN=HSP90 PE=1 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 2.882e-41
Identity = 92/208 (44.23%), Postives = 135/208 (64.90%), Query Frame = 2
Query:    8 FITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSK----EGLKLGKDTKDKELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKD-PEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNI 616
            +ITG + + +EKSPFL+ LK KN+EV+F  DP+DEY M  L ++EDKK  +++K    E     K  ++KE+KE ++ LTK  K  L  + V+ V VS +L + P  + T ++GWSANMERIM++Q L D +  +YM  K+  EI+P  PIIKEL+++V  D  ED  V+    L++ TAL+ SGF+L++P +FA RI   +   LNI
Sbjct:  470 YITGESIKAVEKSPFLDALKAKNFEVLFMVDPIDEYAMTQLKEFEDKKLVDITKDFELEESDEEKAAREKEIKE-YEPLTKALKDILGDQ-VEKVVVSYKLVDAPAAIRTGQFGWSANMERIMKAQALRDTTMSSYMSSKKTFEISPSSPIIKELKKKVETDGAEDKTVKDLTTLLFDTALLTSGFTLDEPSNFAHRINRLIALGLNI 675          
BLAST of CX298061 vs. ExPASy Swiss-Prot
Match: HSC82_YEAST (ATP-dependent molecular chaperone HSC82 OS=Saccharomyces cerevisiae GN=HSC82 PE=1 SV=4)

HSP 1 Score: 167.548 bits (423), Expect = 6.420e-41
Identity = 92/208 (44.23%), Postives = 135/208 (64.90%), Query Frame = 2
Query:    8 FITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSK----EGLKLGKDTKDKELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVK-DPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNI 616
            +ITG + + +EKSPFL+ LK KN+EV+F TDP+DEY    L ++E K   +++K    E     K  ++KE+KE ++ LTK  K  L  + V+ V VS +L + P  + T ++GWSANMERIM++Q L D+S  +YM  K+  EI+P+ PIIKEL++RV +   +D  V+    L+++TAL+ SGFSL +P  FASRI   +   LNI
Sbjct:  469 YITGESLKAVEKSPFLDALKAKNFEVLFLTDPIDEYAFTQLKEFEGKTLVDITKDFELEETDEEKAEREKEIKE-YEPLTKALKDILGDQ-VEKVVVSYKLLDAPAAIRTGQFGWSANMERIMKAQALRDSSMSSYMSSKKTFEISPKSPIIKELKKRVDEGGAQDKTVKDLTNLLFETALLTSGFSLEEPTSFASRINRLISLGLNI 674          
BLAST of CX298061 vs. ExPASy Swiss-Prot
Match: HSP90_PODAN (Heat shock protein 90 homolog OS=Podospora anserina GN=MOD-E PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.868e-40
Identity = 86/208 (41.35%), Postives = 136/208 (65.38%), Query Frame = 2
Query:    8 FITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKES----FKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPE-DAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNI 616
            +ITG + + + KSPFL+ LK+K +EV+F  DP+DEY M  L ++E KK  +++K+  +L +  ++K+ +E+    +  L K  K  L  + V+ V VS++L   PC + T ++GWSANMERIM++Q L D S  +YM  K+  EI+P+ PIIKEL+++V  D E D  V+   QL+++T+L+ SGF++ +P  FA RI+  V   LN+
Sbjct:  465 YITGESIKAVSKSPFLDSLKEKGFEVLFLVDPIDEYAMTQLKEFEGKKLVDITKD-FELEETEEEKKQREAEEKEYDGLAKALKNVLG-DKVEKVVVSHKLVGAPCAIRTGQFGWSANMERIMKAQALRDTSMSSYMSSKKTFEISPKSPIIKELKQKVEADGENDKTVKSIVQLLFETSLLVSGFTIEEPAGFAERIHKLVALGLNL 670          
BLAST of CX298061 vs. ExPASy Swiss-Prot
Match: HSP90_ASPFU (Heat shock protein 90 OS=Aspergillus fumigatus GN=hsp90 PE=1 SV=3)

HSP 1 Score: 165.236 bits (417), Expect = 3.186e-40
Identity = 88/208 (42.31%), Postives = 135/208 (64.90%), Query Frame = 2
Query:    8 FITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSK----EGLKLGKDTKDKELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPE-DAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNI 616
            +ITG + + + KSPFL+ LK+KN+EV+F  DP+DEY    L +++ KK  +++K    E  +  K  ++KE KE ++ L K  K  L  + V+ V VS++L  +PC + T ++GWSANMERIM++Q L D S  +YM  K+  EI+P+  IIKEL+++V  D E D  V+   QL+++T+L+ SGF++ +P  FA RI+  V   LNI
Sbjct:  470 YITGESIKAVAKSPFLDSLKQKNFEVLFLVDPIDEYAFTQLKEFDGKKLVDITKDFELEETEEEKAEREKEEKE-YENLAKSLKNILG-DKVEKVVVSHKLVGSPCAIRTGQFGWSANMERIMKAQALRDTSMSSYMSSKKTFEISPKSSIIKELKKKVEADGENDRTVKSITQLLFETSLLVSGFTIEEPASFAERIHKLVSLGLNI 675          
BLAST of CX298061 vs. ExPASy Swiss-Prot
Match: HSP82_ASHGO (Heat shock protein HSP82 OS=Ashbya gossypii GN=HSP82 PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.435e-40
Identity = 89/208 (42.79%), Postives = 136/208 (65.38%), Query Frame = 2
Query:    8 FITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSK----EGLKLGKDTKDKELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKD-PEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNI 616
            FITG + + +EKSPFL+ LK KN+EV+F  DP+DEY  Q L ++E K+  +++K    E  +  K  +++E+KE F+ LT   K  L  + V+ V VS +L + P  + T ++GWSANMERIM++Q L D++  +YM  K++ EI+P+  IIKEL++RV  +  +D  V+    L+Y+TAL+ SGF+L +P  FA+RI   +   LNI
Sbjct:  468 FITGESIKAVEKSPFLDALKAKNFEVLFLVDPIDEYAFQQLKEFEGKQLVDITKDFELEESEEEKKQREEEIKE-FEPLTAALKEVLGDQ-VEKVVVSYKLIDAPAAIRTGQFGWSANMERIMKAQALRDSTMSSYMASKKIFEISPKSAIIKELKKRVEDNGAQDRTVKDLTSLLYETALLTSGFTLEEPASFATRINRLISLGLNI 673          
BLAST of CX298061 vs. ExPASy Swiss-Prot
Match: ENPL_DICDI (Endoplasmin homolog OS=Dictyostelium discoideum GN=grp94 PE=2 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 7.601e-34
Identity = 76/200 (38.00%), Postives = 130/200 (65.00%), Query Frame = 2
Query:    8 FITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDK-KFQNVSKEGLKLGKDTKD----KELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVK-DPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIY 589
            FITG +K+ +E SP +E+  KK YEV+F  DP+DEYL+  L  ++DK KF N+++ G+K  +D ++    K+  E FK L  + K  L S+ ++ V +S  L ++P ++V++ +G +AN ERIM++Q    A+ Q     K+++EINP HP+IK+L  R+ +   ED   + +A ++Y+T+ + +G+S+++P +FA  IY
Sbjct:  520 FITGKSKDSVEASPLIEQAIKKGYEVLFLVDPIDEYLVPQLDKFDDKYKFTNLARSGVKFNEDKEEEDQRKQTAEEFKPLLSYLKKTL-SDKLEKVVISKVLADSPSILVSNSWGVTANQERIMKAQA-HQANAQPQFNSKKIMEINPSHPLIKKLLNRLNEFGEEDETTKVSAHVLYETSALTAGYSIDNPTNFADFIY 717          
The following BLAST results are available for this feature:
BLAST of CX298061 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 363
Match NameE-valueIdentityDescription
HSP90_EIMTE3.290e-4543.48Heat shock protein 90 OS=Eimeria tenella GN=HSP90 ... [more]
HSP90_SCHPO1.250e-4442.79Heat shock protein 90 homolog OS=Schizosaccharomyc... [more]
ENPL_RABIT4.750e-4443.87Endoplasmin (Fragment) OS=Oryctolagus cuniculus GN... [more]
HSP82_YEAST1.689e-4144.71ATP-dependent molecular chaperone HSP82 OS=Sacchar... [more]
HSP90_CANAL2.882e-4144.23Heat shock protein 90 homolog OS=Candida albicans ... [more]
HSC82_YEAST6.420e-4144.23ATP-dependent molecular chaperone HSC82 OS=Sacchar... [more]
HSP90_PODAN1.868e-4041.35Heat shock protein 90 homolog OS=Podospora anserin... [more]
HSP90_ASPFU3.186e-4042.31Heat shock protein 90 OS=Aspergillus fumigatus GN=... [more]
HSP82_ASHGO5.435e-4042.79Heat shock protein HSP82 OS=Ashbya gossypii GN=HSP... [more]
ENPL_DICDI7.601e-3438.00Endoplasmin homolog OS=Dictyostelium discoideum GN... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC06008B10SK RindPdig24 Citrus clementina cDNA clone C06008B10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX298061 ID=CX298061; Name=CX298061; organism=Citrus clementina; type=EST; length=730bp
GAGGCTTTTCATTACAGGCGCCAACAAGGAACAGTTGGAAAAGTCTCCAT
TCCTGGAGAGGCTTAAGAAGAAGAACTATGAGGTGATTTTCTTCACTGAT
CCAGTTGATGAATACCTGATGCAATACCTGATGGATTATGAAGACAAAAA
GTTCCAAAATGTATCCAAAGAGGGTCTTAAACTTGGTAAAGACACTAAAG
ATAAGGAACTTAAGGAGTCATTCAAGGAGCTCACGAAATGGTGGAAGGGT
GCTCTTGCCAGCGAGAACGTGGATGATGTGAAAGTAAGCAACCGCTTGGA
TAACACCCCTTGCGTAGTTGTGACATCAAAGTATGGTTGGAGTGCGAATA
TGGAGAGGATCATGCAGTCTCAGACTCTCTCAGATGCTAGCAAGCAAGCA
TATATGCGGGGCAAGAGGGTGCTTGAAATCAATCCAAGGCATCCAATCAT
CAAAGAGCTCCGGGAGAGAGTCGTCAAGGACCCTGAGGATGCGGGTGTCC
AGCAAACAGCCCAACTCATTTACCAGACGGCACTCATGGAGAGTGGCTTT
TCGCTCAATGATCCCAAGGATTTTGCCTCCCGAATTTACAGCACGGTGAA
ATCTAGCCTTAACATTAGCCCTGATGCAGCTGTTGAGGAGGAAGATGATG
TAGAAGAGACTGATGCTGACACTGAAATGAAAGAATCTTCGGCTGCCAAG
AGGACGTGGATACAGAGTATTCTGGCAGGA
back to top