CX298061

Overview
NameCX298061
Unique NameCX298061
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length730
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX298061 vs. ExPASy Swiss-Prot
Match: HTPG_PELPD (Chaperone protein htpG OS=Pelobacter propionicus (strain DSM 2379) GN=htpG PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.752e-30
Identity = 77/196 (39.29%), Postives = 115/196 (58.67%), Query Frame = 2
Query:    8 FITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSK-------EGLKLGKDTKDKELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDF 574
            FITG ++  L+ SP LE  K K YEV+F TDPVDE+++Q L +Y++KK + V +       E  K  K+TK +E ++ + +L  + K  L  + V D ++S RL ++ C +V  +YG +ANMERI++      A  Q     KRVLE+NP HPI+K + E   ++ EDA +   A L+Y  AL+  G  + DP  F
Sbjct:  443 FITGDSRATLKISPHLEAFKAKGYEVLFLTDPVDEWVVQALTEYKEKKLKAVDRGDVDLDSEEEKKEKETKQEEARKEYGDLISFIKSHL-EDRVKDARLSKRLTDSACCLVADEYGINANMERILK------AMNQPVPDSKRVLELNPDHPIMKIMTEIFRENKEDARLTDYADLLYDQALLTEGSPIKDPLRF 631          
BLAST of CX298061 vs. ExPASy Swiss-Prot
Match: HSP82_AJECA (Heat shock protein 82 OS=Ajellomyces capsulata GN=HSP82 PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 6.659e-30
Identity = 77/206 (37.38%), Postives = 121/206 (58.74%), Query Frame = 2
Query:    8 FITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSK--EGLKLGKDTKDKELKE-SFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNI 616
            +ITG + + ++KSPFL+ LK+KN+EV+F  DP DEY M  L +++ KK  +++K  E  +  ++ KD+E +E  ++ L K  +  L  + V+ V VS++L  +PC + T ++GWSANMERIM++Q L D S  +  R  R  E N                  D  V+   QL+++T+L+ SGF++ +P  FA RI+  V   LNI
Sbjct:  465 YITGESLKAVQKSPFLDTLKEKNFEVLFLVDPNDEYAMTQLKEFDGKKLVDITKDFELEETEEEKKDREAEEKEYEGLAKSLENIL-GDKVEKVVVSHKLIGSPCAIRTGQFGWSANMERIMKAQALRDTSMSS-RRSSRPTEGN------------------DRTVKSITQLLFETSLLVSGFTIEEPSGFAGRIHKLVSLGLNI 650          
BLAST of CX298061 vs. ExPASy Swiss-Prot
Match: HS904_HUMAN (Putative heat shock protein HSP 90-alpha A4 OS=Homo sapiens GN=HSP90AA4P PE=5 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 8.697e-30
Identity = 75/195 (38.46%), Postives = 109/195 (55.90%), Query Frame = 2
Query:   26 KEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSL 610
            K+Q+  S  ++RL K   EVI+  +P+DEY +Q L ++E K   +V+KE L+L +D ++K+ +E  K+ TK  K          ++ S +          S YGW+ANMERIM++Q L D S   YM  K+ LEINP H  I  LR++   D  D  V+    L+Y+TAL+ S F L  P+  A+RIY   K  L
Sbjct:  207 KDQVANSTIVQRLWKHGLEVIYTIEPIDEYCVQQLKEFEGKTLVSVTKEDLELPEDEEEKKKQEEGKQKTKQKKN-------QSLRTSAK----------STYGWTANMERIMKAQALRDNSTTGYMAAKKHLEINPDHSFIDTLRQKAETDKNDKSVKDLVILLYETALLSSDFGLEGPQTHANRIYRMNKLGL 384          
BLAST of CX298061 vs. ExPASy Swiss-Prot
Match: HTPG_GEOUR (Chaperone protein htpG OS=Geobacter uraniireducens (strain Rf4) GN=htpG PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.305e-29
Identity = 72/195 (36.92%), Postives = 111/195 (56.92%), Query Frame = 2
Query:    8 FITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKESFKELTKWWKGAL------ASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDF 574
            +ITGA++  LE SP LE  +KK +EV++ TDPVDE+++Q L DY+ KK   V +  L+L    + KE +   +E  K ++G L        + V +V+ S+RL ++ C +V  +YG +ANME+I++      A  Q     KRVLE+NP HP+++ L     KD E+  +     L+Y  AL+  G  + DP  F
Sbjct:  443 YITGASRSALENSPHLEIFRKKGFEVLYMTDPVDEWVVQSLTDYDGKKLHAVDRGDLELDSAEEKKEKEAKQEEAKKQYQGVLDFVKEQLKDKVKEVRFSSRLTDSACCLVADEYGLNANMEKILK------AMNQDVPESKRVLELNPDHPLMQVLSSIFEKDKENPRLADYCGLLYDQALLTEGSPVPDPLRF 631          
BLAST of CX298061 vs. ExPASy Swiss-Prot
Match: HTPG_MYCA1 (Chaperone protein htpG OS=Mycobacterium avium (strain 104) GN=htpG PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 7.362e-29
Identity = 69/195 (35.38%), Postives = 117/195 (60.00%), Query Frame = 2
Query:    8 FITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKD-----KELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFA 577
            + TG  ++Q+ KSP LE  K K YEV+  TDPVDE  +  + +++ K  Q+++K  + L  + ++     +E ++ F +L  W K  L S++V +V++SNRL ++P  ++T  +G +  + R+ +      AS Q    GKR+LE+NP+HP++  LR+      +D  V +TA+L+Y TAL+  G +L+DP  FA
Sbjct:  446 YATGETRQQILKSPHLEAFKAKGYEVLLLTDPVDEVWVGTVTEFDGKPLQSIAKGEVDLSAEGEESQAEREEQQKEFADLLAWLKDTL-SDHVKEVRLSNRLTDSPACLITDAFGITPALARLYR------ASGQDIPVGKRILELNPKHPLVTGLRQAHQDRADDPSVAETAELLYGTALLAEGGALDDPARFA 633          
BLAST of CX298061 vs. ExPASy Swiss-Prot
Match: HTPG_MYCPA (Chaperone protein htpG OS=Mycobacterium paratuberculosis GN=htpG PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 9.616e-29
Identity = 69/195 (35.38%), Postives = 116/195 (59.49%), Query Frame = 2
Query:    8 FITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDK-----ELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFA 577
            + TG  ++Q+ KSP LE  K K YEV+  TDPVDE  +  + +++ K  Q+++K  + L  + ++      E ++ F +L  W K  L S++V +V++SNRL ++P  ++T  +G +  + R+ +      AS Q    GKR+LE+NP+HP++  LR+      +D  V +TA+L+Y TAL+  G +L+DP  FA
Sbjct:  446 YATGETRQQILKSPHLEAFKAKGYEVLLLTDPVDEVWVGTVTEFDGKPLQSIAKGEVDLSAEGEESQAERDEQQKEFADLLAWLKDTL-SDHVKEVRLSNRLTDSPACLITDAFGITPALARLYR------ASGQDIPVGKRILELNPKHPLVTGLRQAHQDRADDPSVAETAELLYGTALLAEGGALDDPARFA 633          
BLAST of CX298061 vs. ExPASy Swiss-Prot
Match: HSP90_PLAFP (Heat shock 90 kDa protein homolog (Fragment) OS=Plasmodium falciparum (isolate Palo Alto / Uganda) PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 9.616e-29
Identity = 67/165 (40.61%), Postives = 104/165 (63.03%), Query Frame = 2
Query:  134 DYEDKKFQNVSKEGLKLGKDTKDKE----LKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNI 616
            D++ KK +  +KEGL +    + K+    LK  ++ L K  K  L  + V+ V V  R+ ++PCV+VTS++GWSANMERIM++Q L D S  +YM  K+++EIN RHPII  L+++   D  D  V+    L++ T+L+ SGF+L +P  F+ RI+  +K  L+I
Sbjct:    2 DFDGKKLKCCTKEGLDIHHSEEAKKDFETLKAEYEGLCKVIKDVL-HKKVEKVVVGQRITDSPCVLVTSEFGWSANMERIMKAQALRDNSMTSYMLSKKIMEINARHPIISALKQKADADKSDKTVKYLIWLLFDTSLLTSGFALEEPTTFSKRIHRMIKLGLSI 165          
BLAST of CX298061 vs. ExPASy Swiss-Prot
Match: HTPG_GEOSL (Chaperone protein htpG OS=Geobacter sulfurreducens GN=htpG PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 6.233e-28
Identity = 73/196 (37.24%), Postives = 112/196 (57.14%), Query Frame = 2
Query:    8 FITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSK-------EGLKLGKDTKDKELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDF 574
            FITG ++  LE+SP LE  +KK YEV+F TDPVDE+++Q L +Y  KK + V +       E  K  ++ K +E  + + +L  + K  LA E V +V++SNRL ++ C +V  ++G +ANMERI++      A  Q     KR+LE+NP HPI++ +     KD  +  +     L+Y  AL+  G  + DP  F
Sbjct:  444 FITGTSRAALEQSPHLEIFRKKGYEVLFLTDPVDEWVVQGLPEYGGKKLKAVDRGDVIPATEEEKKEQEAKREEAAKQYGDLLSFVKEKLA-ERVKEVRLSNRLTDSACCLVADEHGLNANMERILR------AMNQTVPESKRILELNPDHPIMQVMATLFGKDKTNPRLADYCDLLYDQALLTEGSPIADPLRF 632          
BLAST of CX298061 vs. ExPASy Swiss-Prot
Match: HTPG_MYCTU (Chaperone protein htpG OS=Mycobacterium tuberculosis GN=htpG PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.040e-27
Identity = 74/208 (35.58%), Postives = 118/208 (56.73%), Query Frame = 2
Query:    8 FITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLG--KDTKDKELKE---SFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDA--GVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSL 610
            + TG  ++QL KSP LE  K K YEV+  TDPVDE  +  + +++ K  Q+V+K  + L   +DT + E +E    F +L  W +  L S++V +V++S RL  +P  ++T  +G +  + RI +      AS Q    GKR+LE+NP HP++  LR+      +DA   + +TA+L+Y TAL+  G +L DP  FA  +   +  +L
Sbjct:  447 YATGETRQQLLKSPHLEAFKAKGYEVLLLTDPVDEVWVGMVPEFDGKPLQSVAKGEVDLSSEEDTSEAEREERQKEFADLLTWLQETL-SDHVKEVRLSTRLTESPACLITDAFGMTPALARIYR------ASGQEVPVGKRILELNPSHPLVTGLRQAHQDRADDAEKSLAETAELLYGTALLAEGGALEDPARFAELLAERLARTL 647          
BLAST of CX298061 vs. ExPASy Swiss-Prot
Match: HTPG_MYCTA (Chaperone protein htpG OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=htpG PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.040e-27
Identity = 74/208 (35.58%), Postives = 118/208 (56.73%), Query Frame = 2
Query:    8 FITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLG--KDTKDKELKE---SFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDA--GVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSL 610
            + TG  ++QL KSP LE  K K YEV+  TDPVDE  +  + +++ K  Q+V+K  + L   +DT + E +E    F +L  W +  L S++V +V++S RL  +P  ++T  +G +  + RI +      AS Q    GKR+LE+NP HP++  LR+      +DA   + +TA+L+Y TAL+  G +L DP  FA  +   +  +L
Sbjct:  447 YATGETRQQLLKSPHLEAFKAKGYEVLLLTDPVDEVWVGMVPEFDGKPLQSVAKGEVDLSSEEDTSEAEREERQKEFADLLTWLQETL-SDHVKEVRLSTRLTESPACLITDAFGMTPALARIYR------ASGQEVPVGKRILELNPSHPLVTGLRQAHQDRADDAEKSLAETAELLYGTALLAEGGALEDPARFAELLAERLARTL 647          
The following BLAST results are available for this feature:
BLAST of CX298061 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 363
Match NameE-valueIdentityDescription
HTPG_PELPD1.752e-3039.29Chaperone protein htpG OS=Pelobacter propionicus (... [more]
HSP82_AJECA6.659e-3037.38Heat shock protein 82 OS=Ajellomyces capsulata GN=... [more]
HS904_HUMAN8.697e-3038.46Putative heat shock protein HSP 90-alpha A4 OS=Hom... [more]
HTPG_GEOUR3.305e-2936.92Chaperone protein htpG OS=Geobacter uraniireducens... [more]
HTPG_MYCA17.362e-2935.38Chaperone protein htpG OS=Mycobacterium avium (str... [more]
HTPG_MYCPA9.616e-2935.38Chaperone protein htpG OS=Mycobacterium paratuberc... [more]
HSP90_PLAFP9.616e-2940.61Heat shock 90 kDa protein homolog (Fragment) OS=Pl... [more]
HTPG_GEOSL6.233e-2837.24Chaperone protein htpG OS=Geobacter sulfurreducens... [more]
HTPG_MYCTU4.040e-2735.58Chaperone protein htpG OS=Mycobacterium tuberculos... [more]
HTPG_MYCTA4.040e-2735.58Chaperone protein htpG OS=Mycobacterium tuberculos... [more]

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Properties
Property NameValue
Genbank descriptionC06008B10SK RindPdig24 Citrus clementina cDNA clone C06008B10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX298061 ID=CX298061; Name=CX298061; organism=Citrus clementina; type=EST; length=730bp
GAGGCTTTTCATTACAGGCGCCAACAAGGAACAGTTGGAAAAGTCTCCAT
TCCTGGAGAGGCTTAAGAAGAAGAACTATGAGGTGATTTTCTTCACTGAT
CCAGTTGATGAATACCTGATGCAATACCTGATGGATTATGAAGACAAAAA
GTTCCAAAATGTATCCAAAGAGGGTCTTAAACTTGGTAAAGACACTAAAG
ATAAGGAACTTAAGGAGTCATTCAAGGAGCTCACGAAATGGTGGAAGGGT
GCTCTTGCCAGCGAGAACGTGGATGATGTGAAAGTAAGCAACCGCTTGGA
TAACACCCCTTGCGTAGTTGTGACATCAAAGTATGGTTGGAGTGCGAATA
TGGAGAGGATCATGCAGTCTCAGACTCTCTCAGATGCTAGCAAGCAAGCA
TATATGCGGGGCAAGAGGGTGCTTGAAATCAATCCAAGGCATCCAATCAT
CAAAGAGCTCCGGGAGAGAGTCGTCAAGGACCCTGAGGATGCGGGTGTCC
AGCAAACAGCCCAACTCATTTACCAGACGGCACTCATGGAGAGTGGCTTT
TCGCTCAATGATCCCAAGGATTTTGCCTCCCGAATTTACAGCACGGTGAA
ATCTAGCCTTAACATTAGCCCTGATGCAGCTGTTGAGGAGGAAGATGATG
TAGAAGAGACTGATGCTGACACTGAAATGAAAGAATCTTCGGCTGCCAAG
AGGACGTGGATACAGAGTATTCTGGCAGGA
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