CX298064

Overview
NameCX298064
Unique NameCX298064
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length527
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX298064 vs. ExPASy Swiss-Prot
Match: SAHH1_ARATH (Adenosylhomocysteinase 1 OS=Arabidopsis thaliana GN=SAHH1 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 7.287e-12
Identity = 31/53 (58.49%), Postives = 38/53 (71.70%), Query Frame = 1 
Query:    1 EKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 159
            EKKVYVLPKHLDEKV            T+L+K+Q+DY+S+  +GPYKP HYRY
Sbjct:  433 EKKVYVLPKHLDEKVALLHLGKLGARLTKLSKDQSDYVSIPIEGPYKPPHYRY 485
[Close]
BLAST of CX298064 vs. ExPASy Swiss-Prot
Match: SAHH_XANOP (Adenosylhomocysteinase OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=ahcY PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.169e-11
Identity = 31/53 (58.49%), Postives = 35/53 (66.04%), Query Frame = 1 
Query:    1 EKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 159
            EKKVY+LPKHLDE+V            T LTK+QADY+ V   GPYKP HYRY
Sbjct:  428 EKKVYILPKHLDEEVARLHLEKIGVKLTTLTKDQADYLGVDVAGPYKPDHYRY 480
[Close]
BLAST of CX298064 vs. ExPASy Swiss-Prot
Match: SAHH_XANOM (Adenosylhomocysteinase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=ahcY PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.169e-11
Identity = 31/53 (58.49%), Postives = 35/53 (66.04%), Query Frame = 1 
Query:    1 EKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 159
            EKKVY+LPKHLDE+V            T LTK+QADY+ V   GPYKP HYRY
Sbjct:  428 EKKVYILPKHLDEEVARLHLEKIGVKLTTLTKDQADYLGVDVAGPYKPDHYRY 480
[Close]
BLAST of CX298064 vs. ExPASy Swiss-Prot
Match: SAHH_XANCP (Adenosylhomocysteinase OS=Xanthomonas campestris pv. campestris GN=ahcY PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.169e-11
Identity = 31/53 (58.49%), Postives = 35/53 (66.04%), Query Frame = 1 
Query:    1 EKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 159
            EKKVY+LPKHLDE+V            T LTK+QADY+ V   GPYKP HYRY
Sbjct:  428 EKKVYILPKHLDEEVARLHLEKIGVKLTTLTKDQADYLGVDVAGPYKPDHYRY 480
[Close]
BLAST of CX298064 vs. ExPASy Swiss-Prot
Match: SAHH_XANC8 (Adenosylhomocysteinase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=ahcY PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.169e-11
Identity = 31/53 (58.49%), Postives = 35/53 (66.04%), Query Frame = 1 
Query:    1 EKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 159
            EKKVY+LPKHLDE+V            T LTK+QADY+ V   GPYKP HYRY
Sbjct:  428 EKKVYILPKHLDEEVARLHLEKIGVKLTTLTKDQADYLGVDVAGPYKPDHYRY 480
[Close]
BLAST of CX298064 vs. ExPASy Swiss-Prot
Match: SAHH_XANAC (Adenosylhomocysteinase OS=Xanthomonas axonopodis pv. citri GN=ahcY PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.169e-11
Identity = 31/53 (58.49%), Postives = 35/53 (66.04%), Query Frame = 1 
Query:    1 EKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 159
            EKKVY+LPKHLDE+V            T LTK+QADY+ V   GPYKP HYRY
Sbjct:  428 EKKVYILPKHLDEEVARLHLEKIGVKLTTLTKDQADYLGVDVAGPYKPDHYRY 480
[Close]
BLAST of CX298064 vs. ExPASy Swiss-Prot
Match: SAHH_DESVM (Adenosylhomocysteinase OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=ahcY PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.169e-11
Identity = 32/53 (60.38%), Postives = 35/53 (66.04%), Query Frame = 1 
Query:    1 EKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 159
            E+KVY+LPK LDE+V            T LTKEQADYI V  DGPYKP HYRY
Sbjct:  427 ERKVYILPKKLDEQVARLHLARLGVTLTTLTKEQADYIGVPVDGPYKPGHYRY 479
[Close]
BLAST of CX298064 vs. ExPASy Swiss-Prot
Match: SAHH_XANC5 (Adenosylhomocysteinase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=ahcY PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 8.057e-11
Identity = 30/53 (56.60%), Postives = 36/53 (67.92%), Query Frame = 1 
Query:    1 EKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 159
            EKKVY+LPKHLDE+V            T LTK+QADY+ V  +GP+KP HYRY
Sbjct:  428 EKKVYILPKHLDEEVARLHLEKIGVKLTTLTKDQADYLGVPVEGPFKPDHYRY 480
[Close]
BLAST of CX298064 vs. ExPASy Swiss-Prot
Match: SAHH_PELCD (Adenosylhomocysteinase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 8.057e-11
Identity = 31/53 (58.49%), Postives = 35/53 (66.04%), Query Frame = 1 
Query:    1 EKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 159
            E KVYVLPK LDEKV            TR+T++QADY+ V  DGPYKP HYRY
Sbjct:  423 ENKVYVLPKQLDEKVARLHLANLGVKLTRMTEKQADYLGVPVDGPYKPEHYRY 475
The following BLAST results are available for this feature:
BLAST of CX298064 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
SAHH1_ARATH7.287e-1258.49Adenosylhomocysteinase 1 OS=Arabidopsis thaliana G... [more]
SAHH_XANOP6.169e-1158.49Adenosylhomocysteinase OS=Xanthomonas oryzae pv. o... [more]
SAHH_XANOM6.169e-1158.49Adenosylhomocysteinase OS=Xanthomonas oryzae pv. o... [more]
SAHH_XANCP6.169e-1158.49Adenosylhomocysteinase OS=Xanthomonas campestris p... [more]
SAHH_XANC86.169e-1158.49Adenosylhomocysteinase OS=Xanthomonas campestris p... [more]
SAHH_XANAC6.169e-1158.49Adenosylhomocysteinase OS=Xanthomonas axonopodis p... [more]
SAHH_DESVM6.169e-1160.38Adenosylhomocysteinase OS=Desulfovibrio vulgaris (... [more]
SAHH_XANC58.057e-1156.60Adenosylhomocysteinase OS=Xanthomonas campestris p... [more]
SAHH_PELCD8.057e-1158.49Adenosylhomocysteinase OS=Pelobacter carbinolicus ... [more]

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Properties
Property NameValue
Genbank descriptionC06008C01SK RindPdig24 Citrus clementina cDNA clone C06008C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX298064 ID=CX298064; Name=CX298064; organism=Citrus clementina; type=EST; length=527bp
GAGAAGAAGGTGTATGTTCTGCCCAAGCACCTCGATGAGAAGGTTGCTGC
TCTTCACCTTGGCAAACTTGGAGCTAAGCTCACCAGGCTCACCAAGGAGC
AGGCTGACTACATCAGTGTGTCCGCCGATGGTCCTTACAAGCCTCTTCAC
TACAGGTACTAAGTGGAAGAAGAAGAAGAAGAAGAGTGAATGTTTTGAGG
GAAAGAAACAAAATATTTGGCCGGCTTGATTGTTTTCAATGATGATCTGT
AGTAGGATGTTAGGTTTAAATTTGGTAGTAGTGTGTGTTTGGGTGGTGGG
AAAGTTGGAGGAAAGAAACGGATTTGTTTCAGTTGATTGAAGACCATTTG
GGATTTGAATAAGGTTTTGGATGGGGCCGTGTTGGATTATGTTGTATTTG
ATGCAGTTTTAAGTTTTGCTTGCTTTGCTGCATCTTGTTATCCTTATTGT
TTACTGATGAATGATTATTAAAAAAAAAAAAAAAATCTTTTTCTCAGTTT
CTTATCTAAATAAAAAATCATTATGAA
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