CX298270
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX298270 vs. ExPASy Swiss-Prot
Match: FER_SOLAB (Ferredoxin OS=Solanum abutiloides PE=1 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 8.825e-32 Identity = 62/96 (64.58%), Postives = 80/96 (83.33%), Query Frame = 1 Query: 229 AVYKIKLIGPNGEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 516 A YK+KL+ P+G EFE +D+YILD AEE G DLPYSCRAG+CS+CAGK+ +GSVDQSDG+FLDD+Q+ G++LTC++YP SD I++HKEEEL Sbjct: 1 ATYKVKLVTPDGPV-EFECPDDEYILDRAEEEGHDLPYSCRAGSCSSCAGKIAAGSVDQSDGNFLDDDQIADGFVLTCVAYPQSDVTIETHKEEEL 95
BLAST of CX298270 vs. ExPASy Swiss-Prot
Match: FER_SYNP4 (Ferredoxin OS=Synechococcus sp. (strain PCC 7418) PE=1 SV=2) HSP 1 Score: 136.346 bits (342), Expect = 1.505e-31 Identity = 63/98 (64.29%), Postives = 76/98 (77.55%), Query Frame = 1 Query: 226 MAVYKIKLIGPN-GEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 516 MA YK+ LI G E +D+YILD AEE G+DLPYSCRAGACSTCAGK+ G +DQSD SFLDD+Q+EAGY+LTC++YP SDC I +H+EEEL Sbjct: 1 MASYKVTLINEEMGLNETIEVPDDEYILDVAEEEGIDLPYSCRAGACSTCAGKIKEGEIDQSDQSFLDDDQIEAGYVLTCVAYPASDCTIITHQEEEL 98
BLAST of CX298270 vs. ExPASy Swiss-Prot
Match: FER2_CYACA (Ferredoxin OS=Cyanidium caldarium GN=PETF PE=1 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.505e-31 Identity = 65/96 (67.71%), Postives = 77/96 (80.21%), Query Frame = 1 Query: 232 VYKIKLIGPN-GEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 516 +YKI+L+ G + DQYILDAAEE GVDLPYSCRAGACSTCAGKLV GSVDQSD SFLD+ Q+ G++LTC++YPTSDCVIQ+H+EE L Sbjct: 1 MYKIQLVNQKEGVDVTINCPGDQYILDAAEEQGVDLPYSCRAGACSTCAGKLVKGSVDQSDQSFLDEEQINNGFILTCVAYPTSDCVIQTHQEEAL 96
BLAST of CX298270 vs. ExPASy Swiss-Prot
Match: FER1_SPIOL (Ferredoxin-1, chloroplastic OS=Spinacia oleracea GN=PETF PE=1 SV=2) HSP 1 Score: 136.346 bits (342), Expect = 1.505e-31 Identity = 72/149 (48.32%), Postives = 96/149 (64.43%), Query Frame = 1 Query: 73 STVTLSAPCMVKAAPRNQLSRNLIKSPSSLGSVKGISKTFGLKC-SPNFQASMAVYKIKLIGPNGEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 516 +T T P+ Q + PS+ G FGLK S + +MA YK+ L+ P G EF+ +D YILDAAEE G+DLPYSCRAG+CS+CAGKL +GS++Q D SFLDD+Q++ G++LTC +YP SD I++HKEEEL Sbjct: 3 ATTTTMMGMATTFVPKPQAPPMMAALPSNTGR-----SLFGLKTGSRGGRMTMAAYKVTLVTPTGNV-EFQCPDDVYILDAAEEEGIDLPYSCRAGSCSSCAGKLKTGSLNQDDQSFLDDDQIDEGWVLTCAAYPVSDVTIETHKEEEL 145
BLAST of CX298270 vs. ExPASy Swiss-Prot
Match: FER_COLES (Ferredoxin OS=Colocasia esculenta PE=1 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.966e-31 Identity = 61/96 (63.54%), Postives = 79/96 (82.29%), Query Frame = 1 Query: 229 AVYKIKLIGPNGEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 516 A YK+KL+ P+G++ EF+ +D YILD AEE G+DLPYSCRAG+CS+CAGK+ G VDQSDGSFLDD Q+ G++LTC++YP SD I++HKEEEL Sbjct: 1 ATYKVKLVTPSGQQ-EFQCPDDVYILDQAEEVGIDLPYSCRAGSCSSCAGKVKVGDVDQSDGSFLDDEQIGEGWVLTCVAYPVSDGTIETHKEEEL 95
BLAST of CX298270 vs. ExPASy Swiss-Prot
Match: FER5_MAIZE (Ferredoxin-5, chloroplastic OS=Zea mays GN=FDX5 PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.966e-31 Identity = 68/130 (52.31%), Postives = 92/130 (70.77%), Query Frame = 1 Query: 160 LGSVKGISKTFGLKCSPNFQASM-----------AVYKIKLIGPNGEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 516 L S + + +F L+ +P +M A Y +KLI P GE E + +D YILD AEE G+DLPYSCRAG+CS+CAGK+VSGS+DQSD SFLDD+Q+ G++LTC++YPTSD VI++HKE++L Sbjct: 5 LSSPRAPAFSFSLRAAPATTVAMTRGASSRLRAQATYNVKLITPEGEV-ELQVPDDVYILDYAEEEGIDLPYSCRAGSCSSCAGKVVSGSLDQSDQSFLDDSQVADGWVLTCVAYPTSDVVIETHKEDDL 133
BLAST of CX298270 vs. ExPASy Swiss-Prot
Match: FER1_SYNP6 (Ferredoxin-1 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=petF1 PE=1 SV=2) HSP 1 Score: 135.961 bits (341), Expect = 1.966e-31 Identity = 63/98 (64.29%), Postives = 79/98 (80.61%), Query Frame = 1 Query: 226 MAVYKIKLIGP-NGEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 516 MA YK+ L+ G + +D YILDAAEE G+DLPYSCRAGACSTCAGK+VSG+VDQSD SFLDD+Q+ AG++LTC++YPTSD I++HKEE+L Sbjct: 1 MATYKVTLVNAAEGLNTTIDVADDTYILDAAEEQGIDLPYSCRAGACSTCAGKVVSGTVDQSDQSFLDDDQIAAGFVLTCVAYPTSDVTIETHKEEDL 98
BLAST of CX298270 vs. ExPASy Swiss-Prot
Match: FER1_SYNE7 (Ferredoxin-1 OS=Synechococcus elongatus (strain PCC 7942) GN=petF PE=3 SV=2) HSP 1 Score: 135.961 bits (341), Expect = 1.966e-31 Identity = 63/98 (64.29%), Postives = 79/98 (80.61%), Query Frame = 1 Query: 226 MAVYKIKLIGP-NGEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 516 MA YK+ L+ G + +D YILDAAEE G+DLPYSCRAGACSTCAGK+VSG+VDQSD SFLDD+Q+ AG++LTC++YPTSD I++HKEE+L Sbjct: 1 MATYKVTLVNAAEGLNTTIDVADDTYILDAAEEQGIDLPYSCRAGACSTCAGKVVSGTVDQSDQSFLDDDQIAAGFVLTCVAYPTSDVTIETHKEEDL 98
BLAST of CX298270 vs. ExPASy Swiss-Prot
Match: FER_CAPAN (Ferredoxin, chloroplastic OS=Capsicum annuum GN=AP1 PE=1 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.568e-31 Identity = 65/110 (59.09%), Postives = 87/110 (79.09%), Query Frame = 1 Query: 190 FGLKCSPNFQAS-MAVYKIKLIGPNGEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 516 FGLK + + + MA YK+KLI P+G EF+ ++ YILD AEEAG DLPYSCRAG+CS+CAGK+ G+VDQ+DG+FLDD+Q+E G++LTC++YP SD I++HKE EL Sbjct: 34 FGLKSANGGKVTCMASYKVKLITPDGPI-EFDCPDNVYILDQAEEAGHDLPYSCRAGSCSSCAGKIAGGAVDQTDGNFLDDDQLEEGWVLTCVAYPQSDVTIETHKEAEL 142
BLAST of CX298270 vs. ExPASy Swiss-Prot
Match: FER1_PLEBO (Ferredoxin-1 OS=Plectonema boryanum GN=petF1 PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.568e-31 Identity = 62/98 (63.27%), Postives = 79/98 (80.61%), Query Frame = 1 Query: 226 MAVYKIKLIGPN-GEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 516 M +K+ LI G E +D+YILDAAEE G+DLPYSCRAGACSTCAGK+ +G+VDQSD SFLDD+Q++AGY+LTC++YPTSDC I +H+EE+L Sbjct: 1 MPSFKVTLINETEGLNTTIEVPDDEYILDAAEEQGIDLPYSCRAGACSTCAGKITAGTVDQSDQSFLDDDQIQAGYVLTCVAYPTSDCTILTHQEEDL 98 The following BLAST results are available for this feature:
BLAST of CX298270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 109
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Sequences
The
following sequences are available for this feature:
EST sequence >CX298270 ID=CX298270; Name=CX298270; organism=Citrus clementina; type=EST; length=705bpback to top |