CX298308

Overview
NameCX298308
Unique NameCX298308
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length455
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX298308 vs. ExPASy Swiss-Prot
Match: C71BS_ARATH (Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=CYP71B28 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 5.522e-35
Identity = 69/140 (49.29%), Postives = 98/140 (70.00%), Query Frame = 1
Query:   10 ELEQTIG-KGKTIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDE 426
            E+  T+G K + I E D+ +L Y + +VKE  RLHPA PLLLPR+ L+ V+I G+ +P   Q+ +NA+AI RD   W NP  F P+RFL S++D++G NFEL+PFGSGRRICPG+ + I ++ L L +L+  FDW L ++
Sbjct:  329 EIRTTLGDKKERITEEDLNQLHYFKLMVKEIFRLHPAAPLLLPRETLSHVKIQGYDIPAKTQIMINAYAIARDPKLWTNPDEFNPDRFLDSSIDYRGLNFELLPFGSGRRICPGMTMGIAIVELGLLNLLYFFDWGLPEK 468          
BLAST of CX298308 vs. ExPASy Swiss-Prot
Match: C71BX_ARATH (Cytochrome P450 71B36 OS=Arabidopsis thaliana GN=CYP71B36 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 7.213e-35
Identity = 66/152 (43.42%), Postives = 102/152 (67.11%), Query Frame = 1
Query:   10 ELEQTIGKGKTIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLE----DENMDMEEKFG 453
            E+   IGK   I   DI +L YL+ V+ ET RLHP  P L+PR+ +++ E+  +++P   +++VN WAIGRD  TW++P  F+PERF+ S++D KG++FEL+PFGSGRR+CP + +   M+   L +++  FDWK+      E++D+EE  G
Sbjct:  330 EIRNQIGKKSMITLDDIDQLHYLKMVINETWRLHPPSPFLIPRQVMSEFELNDYVIPVKTRLYVNVWAIGRDPDTWKDPEEFLPERFVNSSIDAKGQHFELLPFGSGRRMCPAMYMGTTMVEFGLANMLYHFDWKIPVGMVAEDIDLEESPG 481          
BLAST of CX298308 vs. ExPASy Swiss-Prot
Match: C71AL_ARATH (Cytochrome P450 71A21 OS=Arabidopsis thaliana GN=CYP71A21 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 9.420e-35
Identity = 65/141 (46.10%), Postives = 99/141 (70.21%), Query Frame = 1
Query:   19 QTIGKGK-TIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTW-ENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDENMD 435
            +TI KG  ++ E DI  + YL+AV+KET RLHP +PLL P +++ DV +  + +P G QV +NAWAIGR+  TW  +   F PER L S++DF+G NFEL+PFG+GRRICP +  A+ ++ + L + ++ +DWKL +++ +
Sbjct:  323 RTICKGNLSVSEEDIQNMSYLKAVIKETTRLHPPLPLLAPHESIQDVILGDYHIPAGTQVMINAWAIGREAATWGPDAEKFRPERHLDSSVDFRGHNFELVPFGAGRRICPAISFAVVLIEVALANFVHRYDWKLPEDSKE 463          
BLAST of CX298308 vs. ExPASy Swiss-Prot
Match: C71AP_ARATH (Cytochrome P450 71A25 OS=Arabidopsis thaliana GN=CYP71A25 PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 1.230e-34
Identity = 69/147 (46.94%), Postives = 105/147 (71.43%), Query Frame = 1
Query:    4 RLELE-QTIGKGKT-IEESDITRLPYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTW-ENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDENMD 435
            RL+ E +TI KGK+ + E DI  + YL+AV+KE LRLHP  P++ P ++  DV++  + +P G QV +NAWAIGR+  TW  +   F PER L +++DF+G+NFEL+PFG+GRRICP +  A+ +  ++L +L++ FDWKL +E+ +
Sbjct:  316 RLQEEVRTICKGKSRVSEDDIQGMKYLKAVIKEALRLHPPFPMMAPHESTEDVKLRDYHIPAGTQVMMNAWAIGREVATWGPDAEEFKPERHLDTSVDFRGQNFELLPFGAGRRICPAVSFAVVLNEVVLANLVHGFDWKLPEESKE 462          
BLAST of CX298308 vs. ExPASy Swiss-Prot
Match: C71AN_ARATH (Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=CYP71A23 PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 1.230e-34
Identity = 70/147 (47.62%), Postives = 100/147 (68.03%), Query Frame = 1
Query:   19 QTIGKGKT-IEESDITRLPYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTW-ENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDENMDMEEKFG 453
            +TI KGK+ + E DI  + YL+AVVKE LRLHP VPL++P ++  DV +    +P G QV VN WA+GR+  TW  +   F PER L S  DF+G++FELIPFG+GRR+CPG+  A+ +  ++L +L++ FDW+  D+  D+ E  G
Sbjct:  320 RTICKGKSSVSEDDIQGMEYLKAVVKEALRLHPPVPLMVPHQSTQDVRLRDNHIPAGTQVIVNLWAVGREAATWGPDANEFRPERHLESPSDFRGQDFELIPFGAGRRMCPGISFAVVLNEVVLANLVHGFDWQSIDDETDVAESIG 466          
BLAST of CX298308 vs. ExPASy Swiss-Prot
Match: C83B1_ARATH (Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CYP83B1 PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 2.741e-34
Identity = 71/155 (45.81%), Postives = 101/155 (65.16%), Query Frame = 1
Query:    1 ARLELEQTIGKGKTIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTW-ENPLSFMPERFLGSN--LDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKL------EDENMDM 438
            A+ E+   IG    + E DI  LPYL+AV+KE+LRL P +P+LL R+ +AD +I G+ +P    + VNAWA+ RD   W +NP  F+PERF+  +  +DFKG++FEL+PFGSGRR+CP + L I M+ +   +L+  FDW L      ED  MD+
Sbjct:  325 AQDEVRSVIGDKGYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFIPERFMNEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDV 479          
BLAST of CX298308 vs. ExPASy Swiss-Prot
Match: C82A3_SOYBN (Cytochrome P450 82A3 OS=Glycine max GN=CYP82A3 PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 2.741e-34
Identity = 72/154 (46.75%), Postives = 101/154 (65.58%), Query Frame = 1
Query:    1 ARLELEQTIGKGKTIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGS--NLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFD-WKLEDENMDMEEKFG 453
            A+ E++  IGK + I ESDI++L YLQA+VKETLRL+P  P   PR+   +  + G+ + KG ++  N W I RD   W +PL F PERFL +  ++D +G NFEL+PFGSGRR+C G+ L + M+H  L +L++SFD      E +DM E FG
Sbjct:  349 AKEEIDMQIGKDEYIRESDISKLVYLQAIVKETLRLYPPAPFSSPREFTENCILGGYHIKKGTRLIHNLWKIHRDPSVWSDPLEFKPERFLTTHKDVDLRGHNFELLPFGSGRRVCAGMSLGLNMVHFTLANLLHSFDILNPSAEPVDMTEFFG 502          
BLAST of CX298308 vs. ExPASy Swiss-Prot
Match: C71C3_MAIZE (Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 2.741e-34
Identity = 70/147 (47.62%), Postives = 93/147 (63.27%), Query Frame = 1
Query:   43 IEESDITRLPYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLD----FKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDENMD------MEEKFG 453
            I E D++ LPYL+A +KE LRLHP  PLLLP  + AD +I G+ +P   +V VN WAIGRD   WE P  FMPERF+    D    + G++F  +PFGSGRRICPG    +  + +ML +L+  FDW++ +E  D      M+EKFG
Sbjct:  372 IREDDLSSLPYLKASMKEALRLHPPGPLLLPHYSTADCQIDGYHIPANPRVLVNGWAIGRDPAVWEKPEEFMPERFMRDGWDKSNSYSGQDFRYLPFGSGRRICPGANFGLATMEIMLANLMYHFDWEVPNEKEDGCWKVSMDEKFG 518          
BLAST of CX298308 vs. ExPASy Swiss-Prot
Match: C71A4_SOLME (Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71A4 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 3.580e-34
Identity = 71/149 (47.65%), Postives = 102/149 (68.46%), Query Frame = 1
Query:   25 IGKGKT-IEESDITRLPYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFI-VPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKL----EDENMDMEEKFG 453
            + +GK+ I E D+  + YL+AV+KE+LRLHP   LL+PR+++ DV++ G+  +P   Q  +N WAIGRD L+WENP  F PERFL +++D KG  FEL+PFGSGRR CPG   AI ++ L L  L++ F++ L    + E++DM E  G
Sbjct:  341 LAQGKSEITEDDLKNMQYLRAVIKESLRLHPPNSLLVPRESMEDVKLLGYYHIPARTQALINVWAIGRDPLSWENPEEFCPERFLNNDIDMKGLKFELLPFGSGRRGCPGSSFAIAVIELALARLVHKFNFALPKGTKPEDLDMTECTG 489          
BLAST of CX298308 vs. ExPASy Swiss-Prot
Match: C71BL_ARATH (Cytochrome P450 71B21 OS=Arabidopsis thaliana GN=CYP71B21 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 4.675e-34
Identity = 64/137 (46.72%), Postives = 96/137 (70.07%), Query Frame = 1
Query:   10 ELEQTIGKGKT-IEESDITRLPYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKL 417
            E+ + +G  K  I E D+ ++ YL+ V++ET RLHP  PLLLPR+ ++DV+I G+ +PK   + +N +AIGRD   W NP  F+PERF+ S +D+KG++FEL+PFG GRRICPG+   + ++ L L +++  FDW L
Sbjct:  330 EIRELLGDNKEKITEQDLEKVHYLKLVIQETFRLHPPAPLLLPRETMSDVKIQGYNIPKNTMIEINTYAIGRDPNCWTNPNEFIPERFVDSPIDYKGQHFELLPFGGGRRICPGMATGMTIVELGLLNVLYFFDWSL 466          
The following BLAST results are available for this feature:
BLAST of CX298308 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 494
Match NameE-valueIdentityDescription
C71BS_ARATH5.522e-3549.29Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=C... [more]
C71BX_ARATH7.213e-3543.42Cytochrome P450 71B36 OS=Arabidopsis thaliana GN=C... [more]
C71AL_ARATH9.420e-3546.10Cytochrome P450 71A21 OS=Arabidopsis thaliana GN=C... [more]
C71AP_ARATH1.230e-3446.94Cytochrome P450 71A25 OS=Arabidopsis thaliana GN=C... [more]
C71AN_ARATH1.230e-3447.62Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=C... [more]
C83B1_ARATH2.741e-3445.81Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CY... [more]
C82A3_SOYBN2.741e-3446.75Cytochrome P450 82A3 OS=Glycine max GN=CYP82A3 PE=... [more]
C71C3_MAIZE2.741e-3447.62Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 S... [more]
C71A4_SOLME3.580e-3447.65Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71... [more]
C71BL_ARATH4.675e-3446.72Cytochrome P450 71B21 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionC06010G10SK RindPdig24 Citrus clementina cDNA clone C06010G10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX298308 ID=CX298308; Name=CX298308; organism=Citrus clementina; type=EST; length=455bp
GCAAGATTAGAGTTAGAACAAACGATTGGTAAAGGCAAAACAATTGAGGA
ATCAGACATCACTCGGTTACCTTATCTACAAGCAGTAGTCAAAGAAACCT
TGAGGCTGCACCCAGCAGTTCCCTTGTTACTTCCTCGTAAAGCTTTAGCC
GACGTAGAAATTGCGGGCTTCATAGTTCCAAAAGGAGCACAGGTTTTTGT
TAATGCGTGGGCAATTGGCAGAGATGAACTCACATGGGAGAACCCTCTTT
CTTTTATGCCTGAGAGATTCTTGGGGTCAAATCTCGATTTCAAAGGCAGA
AACTTTGAGCTGATCCCCTTTGGATCTGGCCGGCGAATATGTCCTGGTTT
GCCGTTGGCAATTAGAATGTTACATCTAATGTTGGGTTCACTCATTAACT
CCTTTGATTGGAAGCTGGAAGATGAGAACATGGATATGGAAGAAAAATTT
GGCAT
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