CX298309

Overview
NameCX298309
Unique NameCX298309
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length708
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX298309 vs. ExPASy Swiss-Prot
Match: NAMA_BACC2 (NADPH dehydrogenase OS=Bacillus cereus (strain G9842) GN=namA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.400e-15
Identity = 63/199 (31.66%), Postives = 98/199 (49.25%), Query Frame = 3
Query:   57 PRRLTTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGFLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKY------GILYCH--MVEPRMKTV--GEKSECPHSLLPMRKAFKGTF-LVAGGYDREDGNKAIAEGRADLVVYGRLFLANPDLPR 620
            P  +   +I + +  F+ AA  + +AGFD IELHGAHG+LI++F+    N RTD+YGGS ENR RF  EI+++V N++    + +R+S       + D +P+ L +       K+       ++ C    V P    V  G + +    +    K   G   L+  G   E   + + +  ADL+  GR  L NP  PR
Sbjct:  131 PVEMNIQQIKETILAFQRAALRSKQAGFDVIELHGAHGYLINEFLSPLTNKRTDEYGGSPENRYRFLREIIDSV-NKVWDGPIFVRIS-------ANDYHPDGLTVQDYVQYTKWMKEQGIDLIDCSSGAVVPAHIDVYPGYQVQYAKHIKEYTKIATGAVGLITTGSQAE---QILNDNEADLIFIGRELLRNPYFPR 318          
BLAST of CX298309 vs. ExPASy Swiss-Prot
Match: NAMA_BACSU (NADPH dehydrogenase OS=Bacillus subtilis GN=namA PE=1 SV=3)

HSP 1 Score: 80.8777 bits (198), Expect = 7.505e-15
Identity = 59/196 (30.10%), Postives = 97/196 (49.49%), Query Frame = 3
Query:   45 QFTPPRRLTTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGFLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTVGEKSECPHSLLPMRKAFKGTFLVAGGYDR-EDGNKA---IAEGRADLVVYGRLFLANPDLPR 620
            Q   P  ++ +++ + V +F+ AA  A EAGFD IE+H AHG+LI +F+    N RTD+YGGS ENR RF  EI++ V  ++    + +R+S  ++Y + G    + +G   A+ + + G+         +          + +    K  +   +  G      DG+ A   +  GRADL+  GR  L +P   R
Sbjct:  127 QSATPVEMSAEKVKETVQEFKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEV-KQVWDGPLFVRVSA-SDYTDKGLDIADHIG--FAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQADMATGAVGMITDGSMAEEILQNGRADLIFIGRELLRDPFFAR 318          
BLAST of CX298309 vs. ExPASy Swiss-Prot
Match: OYEC_SCHPO (Putative NADPH dehydrogenase C23G7.10c OS=Schizosaccharomyces pombe GN=SPBC23G7.10c PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.802e-15
Identity = 59/202 (29.21%), Postives = 93/202 (46.04%), Query Frame = 3
Query:   57 PRRLTTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGFLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTVGEKSECPHS----------LLPMRKAFK----GTFLVAGGYDRE--DGNKAIAEGRADLVVYGRLFLANPDL 614
            P +LT  +  ++V+ F +AA+ A+E GFD IE+HGAHG+LI   +    NDR D+YGG+ E R  F +E+V +V   I          P    + + D  P+  G  + +++     L   + +  +  +   S   H            +P  +  K    G  L A G  R+    N+ +  G+AD+    R FL NP L
Sbjct:  175 PHKLTEKQYDELVDKFVVAAKRAVEIGFDVIEIHGAHGYLISSTVSPATNDRNDKYGGTFEKRILFPMEVVHSVRKAIPDS------MPLFYRVTATDWLPKGQGWEIEDTV----ALAARLRDGGVDLIDVSSGGNHKDQRIEVKDCYQVPFAEKIKDQVNGILLGAVGMIRDGLTANEILESGKADVTFVAREFLRNPSL 366          
BLAST of CX298309 vs. ExPASy Swiss-Prot
Match: NAMA_BACCQ (NADPH dehydrogenase OS=Bacillus cereus (strain Q1) GN=namA PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.280e-14
Identity = 61/196 (31.12%), Postives = 93/196 (47.45%), Query Frame = 3
Query:   57 PRRLTTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGFLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKY------GILYCH--MVEPRMKTVGEKSECPHSLLPMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYGRLFLANPDLPR 620
            P  ++  +I   V  F+ AA  + +AGFD IE+HGAHG+LI++F+    N RTD+YGGS ENR RF  EI+E++ NE+    + +R+S       + D +P+ L +       K+       ++ C    V P    V    +  ++      A   T  V          + +    ADL+  GR  L NP  PR
Sbjct:  131 PIEMSKHQIKDTVLAFQQAAVRSKQAGFDVIEIHGAHGYLINEFLSPLTNKRTDEYGGSPENRYRFLREIIESI-NEVWNGPLFVRIS-------ANDYHPDGLTVQDYVQYTKWMKEQGVDLIDCSSGAVVPARIDVYPGYQVQYAKHIKEHANIATGAVGLITTGAQAEQILNNNEADLIFIGRELLRNPYFPR 318          
BLAST of CX298309 vs. ExPASy Swiss-Prot
Match: NAMA_BACC7 (NADPH dehydrogenase OS=Bacillus cereus (strain AH187) GN=namA PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.852e-14
Identity = 43/104 (41.35%), Postives = 65/104 (62.50%), Query Frame = 3
Query:   57 PRRLTTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGFLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEAL 368
            P  ++  +I   V  F+ AA  + +AGFD IE+HGAHG+LI++F+    N RTD+YGGS ENR RF  EI+E++ NE+    + +R+S       + D +P+ L
Sbjct:  131 PIEMSKHQIKDTVLAFQQAAVRSKQAGFDVIEIHGAHGYLINEFLSPLTNKRTDEYGGSPENRYRFLREIIESI-NEVWNGPLFVRIS-------ANDYHPDGL 226          
BLAST of CX298309 vs. ExPASy Swiss-Prot
Match: NAMA_BACC1 (NADPH dehydrogenase OS=Bacillus cereus (strain ATCC 10987) GN=namA PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.852e-14
Identity = 60/196 (30.61%), Postives = 93/196 (47.45%), Query Frame = 3
Query:   57 PRRLTTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGFLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKY------GILYCH--MVEPRMKTVGEKSECPHSLLPMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYGRLFLANPDLPR 620
            P  ++  +I   V  F+ AA  + +AGFD IE+HGAHG+LI++F+    N RTD+YGGS ENR RF  EI++++ NE+    + +R+S       + D +P+ L +       K+       ++ C    V P    V    +  ++      A   T  V          + +    ADL+  GR  L NP  PR
Sbjct:  131 PIEMSKHQIKDTVLAFQQAAVRSKQAGFDVIEIHGAHGYLINEFLSPLTNKRTDEYGGSPENRYRFLREIIDSI-NEVWNGPLFVRIS-------ANDYHPDGLTVQDYVQYTKWMKEQGVDLIDCSSGAVVPARIDVYPGYQVQYAKHIKEHANIATGAVGLITTGAQAEQILNNNEADLIFIGRELLRNPYFPR 318          
BLAST of CX298309 vs. ExPASy Swiss-Prot
Match: NAMA_BACC0 (NADPH dehydrogenase OS=Bacillus cereus (strain AH820) GN=namA PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.852e-14
Identity = 60/196 (30.61%), Postives = 93/196 (47.45%), Query Frame = 3
Query:   57 PRRLTTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGFLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKY------GILYCH--MVEPRMKTVGEKSECPHSLLPMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYGRLFLANPDLPR 620
            P  ++  +I   V  F+ AA  + +AGFD IE+HGAHG+LI++F+    N RTD+YGGS ENR RF  EI++++ NE+    + +R+S       + D +P+ L +       K+       ++ C    V P    V    +  ++      A   T  V          + +    ADL+  GR  L NP  PR
Sbjct:  131 PVEMSKHQIKDTVLAFQQAAIRSKQAGFDVIEIHGAHGYLINEFLSPLSNKRTDEYGGSPENRYRFLREIIDSI-NEVWNGPLFVRIS-------ANDYHPDGLTVQDYVQYTKWMKEQGVDLIDCSSGAVVPARIDVYPGYQVQYAKHIKEHANIATGAVGLITTGAQAEQILTNNEADLIFIGRELLRNPYFPR 318          
BLAST of CX298309 vs. ExPASy Swiss-Prot
Match: NAMA_BACLD (NADPH dehydrogenase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=namA PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.725e-14
Identity = 61/195 (31.28%), Postives = 98/195 (50.26%), Query Frame = 3
Query:   57 PRRLTTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGFLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGI----LYCHMVEPRMKTV--GEKSECPHSLLPMRKAFKGTF-LVAGGYDREDGNKAIAEGRADLVVYGRLFLANPDLPR 620
            P  +T ++I + V  F+  A  A  AGFD IE+HGAHG+LI++F+    N R D+YGGS ENR R   E+++AV  E+ A  + +R+S  ++Y   G    + +G   A+ + + G+    +    V P    V  G +     ++    +   G   L+  G   E+    +  GRADL+   R  L +P  P+
Sbjct:  132 PVEMTKEDIKETVQAFKKGAERAKAAGFDIIEIHGAHGYLINEFLSPLSNKREDEYGGSPENRYRLLREVIDAV-KEVWAGPLFVRVSA-SDYKTKGLDVADYVG--FAKWMKEQGVDLIDVSSGAVVPADINVFPGYQVGFADTIRAQAEIQTGAVGLITSGLQAEE---ILQNGRADLIFVARELLRDPYWPK 319          
BLAST of CX298309 vs. ExPASy Swiss-Prot
Match: NAMA_BACCZ (NADPH dehydrogenase OS=Bacillus cereus (strain ZK / E33L) GN=namA PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.354e-14
Identity = 59/196 (30.10%), Postives = 93/196 (47.45%), Query Frame = 3
Query:   57 PRRLTTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGFLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKY------GILYCH--MVEPRMKTVGEKSECPHSLLPMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYGRLFLANPDLPR 620
            P  ++  +I   +  F+ AA  + +AGFD IE+HGAHG+LI++F+    N RTD+YGGS ENR RF  EI++++ NE+    + +R+S       + D +P+ L +       K+       ++ C    V P    V    +  ++      A   T  V          + +    ADL+  GR  L NP  PR
Sbjct:  131 PVEMSKHQIKDTILAFQQAAIRSKQAGFDVIEIHGAHGYLINEFLSPLSNKRTDEYGGSPENRYRFLREIIDSI-NEVWNGPLFVRIS-------ANDYHPDGLTVQDYVQYTKWMKEQGVDLIDCSSGAVVPARIDVYPGYQVQYAKHIKEHANIATGAVGLITTGAQAEQILNNNEADLIFIGRELLRNPYFPR 318          
BLAST of CX298309 vs. ExPASy Swiss-Prot
Match: NAMA_BACAN (NADPH dehydrogenase OS=Bacillus anthracis GN=namA PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.354e-14
Identity = 59/196 (30.10%), Postives = 93/196 (47.45%), Query Frame = 3
Query:   57 PRRLTTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGFLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKY------GILYCH--MVEPRMKTVGEKSECPHSLLPMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYGRLFLANPDLPR 620
            P  ++  +I   +  F+ AA  + +AGFD IE+HGAHG+LI++F+    N RTD+YGGS ENR RF  EI++++ NE+    + +R+S       + D +P+ L +       K+       ++ C    V P    V    +  ++      A   T  V          + +    ADL+  GR  L NP  PR
Sbjct:  131 PVEMSIHQIKNTILAFQQAAIRSKQAGFDVIEIHGAHGYLINEFLSPLSNKRTDEYGGSPENRYRFLREIIDSI-NEVWNGPLFVRIS-------ANDYHPDGLTVQDYVQYTKWMKEQGVDLIDCSSGAVVPARIDVYPGYQVQYAKHIKEHANIATGAVGLITTGAQAEQILNNNEADLIFIGRELLRNPYFPR 318          
The following BLAST results are available for this feature:
BLAST of CX298309 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
NAMA_BACC24.400e-1531.66NADPH dehydrogenase OS=Bacillus cereus (strain G98... [more]
NAMA_BACSU7.505e-1530.10NADPH dehydrogenase OS=Bacillus subtilis GN=namA P... [more]
OYEC_SCHPO9.802e-1529.21Putative NADPH dehydrogenase C23G7.10c OS=Schizosa... [more]
NAMA_BACCQ1.280e-1431.12NADPH dehydrogenase OS=Bacillus cereus (strain Q1)... [more]
NAMA_BACC72.852e-1441.35NADPH dehydrogenase OS=Bacillus cereus (strain AH1... [more]
NAMA_BACC12.852e-1430.61NADPH dehydrogenase OS=Bacillus cereus (strain ATC... [more]
NAMA_BACC02.852e-1430.61NADPH dehydrogenase OS=Bacillus cereus (strain AH8... [more]
NAMA_BACLD3.725e-1431.28NADPH dehydrogenase OS=Bacillus licheniformis (str... [more]
NAMA_BACCZ6.354e-1430.10NADPH dehydrogenase OS=Bacillus cereus (strain ZK ... [more]
NAMA_BACAN6.354e-1430.10NADPH dehydrogenase OS=Bacillus anthracis GN=namA ... [more]

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Properties
Property NameValue
Genbank descriptionC06010G11SK RindPdig24 Citrus clementina cDNA clone C06010G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX298309 ID=CX298309; Name=CX298309; organism=Citrus clementina; type=EST; length=708bp
AGCCATTGACACCTCAAATCCGCACTAATGGTGTTGATATTGCACAATTC
ACTCCTCCAAGGCGGCTAACGACAGATGAAATCCCTCAAATTGTGAATGA
TTTCAGGCTTGCTGCAAGAAATGCAATTGAGGCTGGTTTCGATGGCATTG
AGCTCCACGGTGCACATGGCTTCCTAATTGACCAATTTATGAAGGATCAA
GTGAATGATCGAACAGACCAGTATGGAGGATCCTTAGAGAACCGTTGCCG
TTTTGCTTTAGAAATAGTTGAAGCTGTTTCCAATGAAATAGGGGCAGATA
GGGTTGGGATAAGACTATCTCCGTTTGCAAACTATATGGAATCAGGGGAC
TCTAACCCAGAAGCTTTAGGTCTTTACATGGCAGAATCCTTGAACAAATA
CGGTATCCTCTATTGTCACATGGTTGAGCCGAGGATGAAAACAGTTGGAG
AAAAATCTGAATGTCCTCACAGTTTGCTGCCCATGAGAAAGGCTTTCAAG
GGTACTTTTCTTGTCGCTGGGGGTTATGACAGGGAAGATGGAAACAAAGC
TATTGCTGAAGGCCGTGCAGATCTTGTTGTTTATGGTCGCTTGTTCTTGG
CTAATCCAGATTTACCCAGGAGATTTGAGTTCAATGCCCCCCTCAATAAG
TACAACAGAGAAACATTCTATGTTTCCGATCCTGTTGTTGGTTACACGGA
TTATCCCT
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