CX298310

Overview
NameCX298310
Unique NameCX298310
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX298310 vs. ExPASy Swiss-Prot
Match: TAS_SHIFL (Protein tas OS=Shigella flexneri GN=tas PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.375e-13
Identity = 71/239 (29.71%), Postives = 108/239 (45.19%), Query Frame = 1
Query:   25 KLGSQGLEVSAQGLGCMGMSAFYGPPKPESDMIALIHHAINSGITLLDTSDIY----GPHT---NEILLGKAL-KGGMRERVELATKFGISYADGKREIRGDPAY----ARAACEASLKRLDIDCIDLYYQH---------------RIDTRVPIEV--TIGELKKLVEEGKIKYIGLSEASASTIRR------AHAVHPITAVQLEWSLWSRDVEAEIVPTCRELGIGIVAYSPLGRG 636
            ++    LEVS  GLG M     +G    E+D  A + +A+  GI L+D +++Y     P T    E  +G  L K G RE++ +A+K      +  + IR D A      R A   SLKRL  D +DLY  H                 D+   + +  T+  L +    GKI+YIG+S  +A  + R       H +  I  +Q  +SL +R  E  +    +  G+ ++AYS LG G
Sbjct:    5 RIPHSSLEVSTLGLGTMT----FGEQNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPETQGLTETYVGNWLAKHGSREKLIIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDTLDALAEYQRAGKIRYIGVSNETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSCLGFG 239          
BLAST of CX298310 vs. ExPASy Swiss-Prot
Match: TAS_ECOLI (Protein tas OS=Escherichia coli (strain K12) GN=tas PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.375e-13
Identity = 71/239 (29.71%), Postives = 108/239 (45.19%), Query Frame = 1
Query:   25 KLGSQGLEVSAQGLGCMGMSAFYGPPKPESDMIALIHHAINSGITLLDTSDIY----GPHT---NEILLGKAL-KGGMRERVELATKFGISYADGKREIRGDPAY----ARAACEASLKRLDIDCIDLYYQH---------------RIDTRVPIEV--TIGELKKLVEEGKIKYIGLSEASASTIRR------AHAVHPITAVQLEWSLWSRDVEAEIVPTCRELGIGIVAYSPLGRG 636
            ++    LEVS  GLG M     +G    E+D  A + +A+  GI L+D +++Y     P T    E  +G  L K G RE++ +A+K      +  + IR D A      R A   SLKRL  D +DLY  H                 D+   + +  T+  L +    GKI+YIG+S  +A  + R       H +  I  +Q  +SL +R  E  +    +  G+ ++AYS LG G
Sbjct:    5 RIPHSSLEVSTLGLGTMT----FGEQNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPETQGLTETYVGNWLAKHGSREKLIIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDTLDALAEYQRAGKIRYIGVSNETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSCLGFG 239          
BLAST of CX298310 vs. ExPASy Swiss-Prot
Match: ARK72_HUMAN (Aflatoxin B1 aldehyde reductase member 2 OS=Homo sapiens GN=AKR7A2 PE=1 SV=3)

HSP 1 Score: 75.8702 bits (185), Expect = 2.375e-13
Identity = 61/194 (31.44%), Postives = 92/194 (47.42%), Query Frame = 1
Query:  124 ALIHHAINSGITLLDTSDIYGPHTNEILLGKALKG--GMRERVELATKFGISYADGKREIRGDPAYARAACEASLKRLDIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSE------ASASTIRRAHAVHPITAVQLEWSLWSRDVEAEIVPTCRELGIGIVAYSPLGRGFFSSGPKLVESFSKE 681
            A +   +  G T LDT+ +Y    +E +LG    G  G   RV++ATK   +  DGK      P   R+  E SLKRL    +DL+Y H  D   P+E T+   ++L +EGK   +GLS       A   T+ +++     T  Q  ++  +R VE E+ P  R  G+   AY+PL  G  +   K  +   K+
Sbjct:   58 AAVRAFLERGHTELDTAFMYSDGQSETILGGLGLGLGGGDCRVKIATK--ANPWDGKSL---KPDSVRSQLETSLKRLQCPQVDLFYLHAPDHGTPVEETLHACQRLHQEGKFVELGLSNYASWEVAEICTLCKSNGWILPTVYQGMYNATTRQVETELFPCLRHFGLRFYAYNPLAGGLLTGKYKYEDKDGKQ 246          
BLAST of CX298310 vs. ExPASy Swiss-Prot
Match: ARK74_HUMAN (Aflatoxin B1 aldehyde reductase member 4 OS=Homo sapiens GN=AKR7L PE=2 SV=5)

HSP 1 Score: 75.485 bits (184), Expect = 3.102e-13
Identity = 57/188 (30.32%), Postives = 89/188 (47.34%), Query Frame = 1
Query:  142 INSGITLLDTSDIYGPHTNEILLGK-ALKGGMRE-RVELATKFGISYADGKREIRGDPAYARAACEASLKRLDIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSE------ASASTIRRAHAVHPITAVQLEWSLWSRDVEAEIVPTCRELGIGIVAYSPLGRGFFSSGPKLVESFSKE 681
            +  G T +DT+ +Y    +E +LG   L+ G  + RV++ATK      +  +     P   R+  E SLKRL    +DL+Y H  D   P+E T+    +L +EGK   +GLS       A   T+ +++     T  Q  +S  +R VE E+ P  R  G+   AY+PL  G  +   K  +   K+
Sbjct:   36 LERGHTEIDTAFLYSDGQSETILGGLGLRMGSSDCRVKIATKANPWIGNSLK-----PDSVRSQLETSLKRLQCPUVDLFYLHAPDHSAPVEETLRACHQLHQEGKFVELGLSNYAAWEVAEICTLCKSNGWILPTVYQGMYSATTRQVETELFPCLRHFGLRFYAYNPLAGGLLTGKYKYEDKDGKQ 218          
BLAST of CX298310 vs. ExPASy Swiss-Prot
Match: YDBC_ECOLI (Putative oxidoreductase ydbC OS=Escherichia coli (strain K12) GN=ydbC PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.539e-12
Identity = 55/208 (26.44%), Postives = 99/208 (47.60%), Query Frame = 1
Query:   49 VSAQGLGCMGMSA--FYGPPKPESDMIALIHHAINSGITLLDTSDIYGPHTNEILLGKALKGGMRERVELATKFGISYADGKREIRG-DPAYARAACEASLKRLDIDCIDLYYQHRIDTRV-----------PIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEAEIVPTCRELGIGIVAYSPLG 630
            V+  G G M ++    +GPP+     I ++  A+  G+  +DTSD YGPH    ++ +AL     + + + TK G    +    +    PA  + A   +L+ L +D +D+     ++ RV            IE ++  L ++ ++G +K+IGLS  + + +  A  +  I  VQ E+++  R  +A I     + GI  V + PLG
Sbjct:   13 VNRLGYGAMQLAGPGVFGPPRDRHVAITVLREALALGVNHIDTSDFYGPHVTNQIIREALY-PYSDDLTIVTKIGARRGEDASWLPAFSPAELQKAVHDNLRNLGLDVLDV-----VNLRVMMGDGHGPAEGSIEASLTVLAEMQQQGLVKHIGLSNVTPTQVAEARKIAEIVCVQNEYNIAHRADDAMIDALAHD-GIAYVPFFPLG 213          
BLAST of CX298310 vs. ExPASy Swiss-Prot
Match: Y2320_MYCBO (Uncharacterized oxidoreductase Mb2320 OS=Mycobacterium bovis GN=Mb2320 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.849e-12
Identity = 54/172 (31.40%), Postives = 88/172 (51.16%), Query Frame = 1
Query:  127 LIHHAINSGITLLDTSDIYGPHTNEILLGKALKGGMRERVELATKFGISYADGKREIRGDPAYARAACEASLKRLDIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAV--HPITAVQLEWSLWSRDVEAEIVPTCRELGIGIVAYSPLGRG 636
            ++  A   G+TL DT++IYG   +E +LG+AL G  R  V +A+K           +   PA  +    AS +RL ++ I LY  H+ +  VP  V +  ++ L++ G I   G+S  S +  R+A A    P+ + Q+ +SL   D   ++VP        ++AYSPL +G
Sbjct:   41 IVKRARALGVTLFDTAEIYGLGKSERILGEAL-GDDRTEVVVASKV--------FPVAPFPAVIKNRERASARRLQLNRIPLYQIHQPNPVVPDSVIMPGMRDLLDSGDIGAAGVSNYSLARWRKADAALGRPVVSNQVHFSLAHPDALEDLVPFAELENRIVIAYSPLAQG 203          
BLAST of CX298310 vs. ExPASy Swiss-Prot
Match: Y2298_MYCTU (Uncharacterized oxidoreductase Rv2298/MT2355 OS=Mycobacterium tuberculosis GN=Rv2298 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.849e-12
Identity = 54/172 (31.40%), Postives = 88/172 (51.16%), Query Frame = 1
Query:  127 LIHHAINSGITLLDTSDIYGPHTNEILLGKALKGGMRERVELATKFGISYADGKREIRGDPAYARAACEASLKRLDIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAV--HPITAVQLEWSLWSRDVEAEIVPTCRELGIGIVAYSPLGRG 636
            ++  A   G+TL DT++IYG   +E +LG+AL G  R  V +A+K           +   PA  +    AS +RL ++ I LY  H+ +  VP  V +  ++ L++ G I   G+S  S +  R+A A    P+ + Q+ +SL   D   ++VP        ++AYSPL +G
Sbjct:   41 IVKRARALGVTLFDTAEIYGLGKSERILGEAL-GDDRTEVVVASKV--------FPVAPFPAVIKNRERASARRLQLNRIPLYQIHQPNPVVPDSVIMPGMRDLLDSGDIGAAGVSNYSLARWRKADAALGRPVVSNQVHFSLAHPDALEDLVPFAELENRIVIAYSPLAQG 203          
BLAST of CX298310 vs. ExPASy Swiss-Prot
Match: AAD10_YEAST (Putative aryl-alcohol dehydrogenase AAD10 OS=Saccharomyces cerevisiae GN=AAD10 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.639e-12
Identity = 49/164 (29.88%), Postives = 79/164 (48.17%), Query Frame = 1
Query:  232 MRERVELATKFGISYADGKREIRGDPAY--------ARAACEASLKRLDIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRA------HAVHPITAVQLEWSLWSRDVEAEIVPTCRELGIGIVAYSPLGRGFFSSGPKLVESFSKE 681
            +R+++ +ATKF   Y  G    +G  A            +   SL++L  D ID+ Y H  D    IE  +  L  LV++GK+ Y+G+S+  A  +  A      H   P +  Q +W++ +RD E +I+P  R  G+ +  +  +G G F S  K VE   K+
Sbjct:    6 LRDQIVIATKFTTDYK-GYDVGKGKSANFCGNHKRSLHVSVRDSLRKLQTDWIDILYVHWWDYMSSIEEVMDSLHILVQQGKVLYLGVSDTPAWVVSAANYYATSHGKTPFSIYQGKWNVLNRDFERDIIPMARHFGMALAPWDVMGGGRFQS-KKAVEERKKK 167          
BLAST of CX298310 vs. ExPASy Swiss-Prot
Match: YP088_YEAST (Putative aryl-alcohol dehydrogenase YPL088W OS=Saccharomyces cerevisiae GN=YPL088W PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.977e-12
Identity = 61/243 (25.10%), Postives = 108/243 (44.44%), Query Frame = 1
Query:   13 VKRIKLGSQGLEVSAQGLGCMGMSAFYGPPK-------PESDMIALIHHAINSGITLLDTSDIYGPHTNEILLGKALK--GGMRERVELATKFGISYADG-------------KREIRGDPAYAR----AACEASLKRLDIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRR------AHAVHPITAVQLEWSLWSRDVEAEIVPTCRELGIGIVAYSPLGRGFFS 645
            VK+++LG+ GL++S   +GCM     YG  K        ++ +  ++ H  + G+   DT+D Y    +E ++ + L+     RE V + TK      +              + ++      +R    A  E S+KRL    IDL   HR+D   P++  +  L  +VE G ++YIG S   A+           +      + Q  ++L  R+ E E++P  +   IG++ +SP  RG  +
Sbjct:    4 VKQVRLGNSGLKISPIVIGCMS----YGSKKWADWVIEDKTQIFKIMKHCYDKGLRTFDTADFYSNGLSERIIKEFLEYYSIKRETVVIMTKIYFPVDETLDLHHNFTLNEFEELDLSNQRGLSRKHIIAGVENSVKRLGT-YIDLLQIHRLDHETPMKEIMKALNDVVEAGHVRYIGASSMLATEFAELQFTADKYGWFQFISSQSYYNLLYREDERELIPFAKRHNIGLLPWSPNARGMLT 241          
BLAST of CX298310 vs. ExPASy Swiss-Prot
Match: ARK73_RAT (Aflatoxin B1 aldehyde reductase member 3 OS=Rattus norvegicus GN=Akr7a3 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 9.977e-12
Identity = 57/193 (29.53%), Postives = 87/193 (45.08%), Query Frame = 1
Query:  124 ALIHHAINSGITLLDTSDIYGPHTNEILLGKALKGGMRE--RVELATKFGISYADGKREIRGDPAYARAACEASLKRLDIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSE------ASASTIRRAHAVHPITAVQLEWSLWSRDVEAEIVPTCRELGIGIVAYSPLGRGFFSSGPKLVESFSK 678
            A +   +  G T +DT+ +Y    +E +LG    G  R   +V++ATK    +    +     PA  R   E SLKRL    +DL+Y H  D   PIE T+    +L +EGK   +GLS       A   T+ + +     T  Q  ++  +R VE E+ P  R  G+   A++PL  G  +   K  +   K
Sbjct:   26 ASVRAFLQRGHTEIDTAFVYANGQSETILGDLGLGLGRSGCKVKIATKAAPMFGKTLK-----PADVRFQLETSLKRLQCPRVDLFYLHFPDHGTPIEETLQACHQLHQEGKFVELGLSNYVSWEVAEICTLCKKNGWIMPTVYQGMYNAITRQVETELFPCLRHFGLRFYAFNPLAGGLLTGRYKYQDKDGK 213          
The following BLAST results are available for this feature:
BLAST of CX298310 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
TAS_SHIFL2.375e-1329.71Protein tas OS=Shigella flexneri GN=tas PE=3 SV=1[more]
TAS_ECOLI2.375e-1329.71Protein tas OS=Escherichia coli (strain K12) GN=ta... [more]
ARK72_HUMAN2.375e-1331.44Aflatoxin B1 aldehyde reductase member 2 OS=Homo s... [more]
ARK74_HUMAN3.102e-1330.32Aflatoxin B1 aldehyde reductase member 4 OS=Homo s... [more]
YDBC_ECOLI1.539e-1226.44Putative oxidoreductase ydbC OS=Escherichia coli (... [more]
Y2320_MYCBO5.849e-1231.40Uncharacterized oxidoreductase Mb2320 OS=Mycobacte... [more]
Y2298_MYCTU5.849e-1231.40Uncharacterized oxidoreductase Rv2298/MT2355 OS=My... [more]
AAD10_YEAST7.639e-1229.88Putative aryl-alcohol dehydrogenase AAD10 OS=Sacch... [more]
YP088_YEAST9.977e-1225.10Putative aryl-alcohol dehydrogenase YPL088W OS=Sac... [more]
ARK73_RAT9.977e-1229.53Aflatoxin B1 aldehyde reductase member 3 OS=Rattus... [more]

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Properties
Property NameValue
Genbank descriptionC06010G12SK RindPdig24 Citrus clementina cDNA clone C06010G12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX298310 ID=CX298310; Name=CX298310; organism=Citrus clementina; type=EST; length=700bp
GAGGCGGGGGCAGTGAAGAGAATCAAGCTTGGTTCACAAGGTCTAGAGGT
TTCAGCACAAGGCTTAGGATGCATGGGCATGTCCGCCTTCTACGGGCCCC
CGAAGCCAGAATCCGACATGATCGCCTTGATCCACCATGCCATTAACAGT
GGCATCACTCTACTTGACACCTCCGATATTTACGGGCCCCACACCAATGA
AATCCTTCTGGGAAAGGCTTTGAAGGGAGGAATGAGGGAAAGAGTTGAAT
TGGCTACTAAATTTGGTATCAGCTATGCGGATGGTAAAAGGGAAATTCGC
GGTGACCCGGCTTATGCGAGAGCTGCATGTGAGGCCAGCTTGAAGCGTCT
GGATATTGATTGTATTGATCTTTATTACCAACATCGCATTGATACACGAG
TTCCCATTGAAGTCACGATTGGAGAACTCAAGAAACTAGTTGAAGAGGGT
AAGATAAAGTATATAGGTCTGTCCGAGGCTTCTGCCTCAACAATTAGACG
AGCTCATGCTGTCCATCCAATAACAGCTGTGCAGTTGGAATGGTCCTTGT
GGTCACGAGATGTGGAGGCAGAGATTGTTCCTACTTGCAGGGAACTTGGC
ATTGGAATTGTTGCATACAGTCCTCTAGGACGAGGATTTTTTTCCTCAGG
GCCTAAGTTGGTTGAAAGCTTTTCAAAGGAAGATTTTAGACAGTATCTAC
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