CX298417
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX298417 vs. ExPASy Swiss-Prot
Match: CLPP_SOYBN (ATP-dependent Clp protease proteolytic subunit OS=Glycine max GN=clpP PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 3.756e-43 Identity = 85/99 (85.86%), Postives = 91/99 (91.92%), Query Frame = 3 Query: 192 LINRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 488 + NRLYRERLLFLGQ V+S+ISNQLI +MVYLSIE E KDLYLFINSPGGWVIPGIAIYDTMQFV+PDVQT+CMGLAASMGSFLLA G TKRLAFPHA Sbjct: 23 IYNRLYRERLLFLGQEVDSEISNQLISLMVYLSIEEENKDLYLFINSPGGWVIPGIAIYDTMQFVQPDVQTVCMGLAASMGSFLLAGGEITKRLAFPHA 121
BLAST of CX298417 vs. ExPASy Swiss-Prot
Match: CLPP_PANGI (ATP-dependent Clp protease proteolytic subunit OS=Panax ginseng GN=clpP PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 3.756e-43 Identity = 85/103 (82.52%), Postives = 93/103 (90.29%), Query Frame = 3 Query: 180 YCFILINRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 488 Y + NRLYRERLLFLGQ V S+ISNQLIG+MVYLSIE++TKDLYLF+NSPGGWV+PGIAIYDTMQFVRPDV TICMGLAASMGSF+LA G TKRLAFPHA Sbjct: 19 YWVDIYNRLYRERLLFLGQPVASEISNQLIGLMVYLSIEDDTKDLYLFMNSPGGWVLPGIAIYDTMQFVRPDVHTICMGLAASMGSFILAGGEITKRLAFPHA 121
BLAST of CX298417 vs. ExPASy Swiss-Prot
Match: CLPP_MORIN (ATP-dependent Clp protease proteolytic subunit OS=Morus indica GN=clpP PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 6.407e-43 Identity = 83/99 (83.84%), Postives = 93/99 (93.94%), Query Frame = 3 Query: 192 LINRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 488 +INRLYRERLLFLGQ V+S+ISNQLIG+MV+LSIE++TKDLYLFINSPGGWVIPG+ IYDTMQFV+PDVQTICMGLAASMGSF+L G TKRLAFPHA Sbjct: 23 VINRLYRERLLFLGQEVDSEISNQLIGLMVFLSIEDDTKDLYLFINSPGGWVIPGLGIYDTMQFVQPDVQTICMGLAASMGSFILVGGEITKRLAFPHA 121
BLAST of CX298417 vs. ExPASy Swiss-Prot
Match: CLPP_LOTJA (ATP-dependent Clp protease proteolytic subunit OS=Lotus japonicus GN=clpP PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 6.407e-43 Identity = 84/99 (84.85%), Postives = 92/99 (92.93%), Query Frame = 3 Query: 192 LINRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 488 + NRLYRERLLFLGQ V S+ISNQLIG+MVYLSIE++ KDLYLFINSPGGWVIPGIAIYDTMQFV+PDVQT+CMGLAASMGSF+LA G TKRLAFPHA Sbjct: 23 IYNRLYRERLLFLGQEVNSEISNQLIGLMVYLSIEDDKKDLYLFINSPGGWVIPGIAIYDTMQFVQPDVQTVCMGLAASMGSFVLAGGKITKRLAFPHA 121
BLAST of CX298417 vs. ExPASy Swiss-Prot
Match: CLPP_NANDO (ATP-dependent Clp protease proteolytic subunit OS=Nandina domestica GN=clpP PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 8.368e-43 Identity = 84/97 (86.60%), Postives = 90/97 (92.78%), Query Frame = 3 Query: 198 NRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 488 NRLYRERLLFLGQ V+S+ISNQLIG+MVYLSIE+ETKDLYLFINSPGGWVIPG+AIYDTMQFV PDV TICMGLAASMGSF+L G TKRLAFPHA Sbjct: 25 NRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDETKDLYLFINSPGGWVIPGVAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPHA 121
BLAST of CX298417 vs. ExPASy Swiss-Prot
Match: CLPP_EPIVI (ATP-dependent Clp protease proteolytic subunit OS=Epifagus virginiana GN=clpP PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 8.368e-43 Identity = 83/97 (85.57%), Postives = 91/97 (93.81%), Query Frame = 3 Query: 198 NRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 488 NRLYRERLLFLGQ V+SDISNQLIG+MVYLSIE++TK++YLFINSPGGWVIPG+AIYDTMQFVRP+V TICMGLAASMGSFLL G TKRLAFPHA Sbjct: 25 NRLYRERLLFLGQEVDSDISNQLIGLMVYLSIEDDTKEIYLFINSPGGWVIPGVAIYDTMQFVRPEVHTICMGLAASMGSFLLVGGEITKRLAFPHA 121
BLAST of CX298417 vs. ExPASy Swiss-Prot
Match: CLPP_POPTR (ATP-dependent Clp protease proteolytic subunit OS=Populus trichocarpa GN=clpP PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.093e-42 Identity = 83/97 (85.57%), Postives = 90/97 (92.78%), Query Frame = 3 Query: 198 NRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 488 NRLYRERLLFLGQ ++S+ISNQLIG+MVYLS E+E KDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQT+CMGLAASMGSF+L G TKRLAFPHA Sbjct: 25 NRLYRERLLFLGQDIDSEISNQLIGLMVYLSTESEIKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTVCMGLAASMGSFILVGGKITKRLAFPHA 121
BLAST of CX298417 vs. ExPASy Swiss-Prot
Match: CLPP_POPAL (ATP-dependent Clp protease proteolytic subunit OS=Populus alba GN=clpP PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.093e-42 Identity = 83/97 (85.57%), Postives = 90/97 (92.78%), Query Frame = 3 Query: 198 NRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 488 NRLYRERLLFLGQ ++S+ISNQLIG+MVYLS E+E KDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQT+CMGLAASMGSF+L G TKRLAFPHA Sbjct: 25 NRLYRERLLFLGQDIDSEISNQLIGLMVYLSTESEIKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTVCMGLAASMGSFILVGGKITKRLAFPHA 121
BLAST of CX298417 vs. ExPASy Swiss-Prot
Match: CLPP_EUCGG (ATP-dependent Clp protease proteolytic subunit OS=Eucalyptus globulus subsp. globulus GN=clpP PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.093e-42 Identity = 83/97 (85.57%), Postives = 90/97 (92.78%), Query Frame = 3 Query: 198 NRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 488 NRLYRERLLFLGQ V+S+ISNQLIG+MVYLSIEN+ KDLYLFINSPGGWVIPG+AIYDTMQFV+PDV TICMGLAASMGSF+L G TKRLAFPHA Sbjct: 25 NRLYRERLLFLGQEVDSEISNQLIGLMVYLSIENDNKDLYLFINSPGGWVIPGVAIYDTMQFVQPDVHTICMGLAASMGSFVLVGGEITKRLAFPHA 121
BLAST of CX298417 vs. ExPASy Swiss-Prot
Match: CLPP_ATRBE (ATP-dependent Clp protease proteolytic subunit OS=Atropa belladonna GN=clpP PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.093e-42 Identity = 83/97 (85.57%), Postives = 90/97 (92.78%), Query Frame = 3 Query: 198 NRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 488 NRLYRERLLFLGQ + S+ISNQLIG+MVYLSIE+ETK+LYLFINSPGGWVIPGIAIYDTMQFVRPDV T+CMGLAASMGSF+L G TKRLAFPHA Sbjct: 25 NRLYRERLLFLGQGINSEISNQLIGLMVYLSIEDETKELYLFINSPGGWVIPGIAIYDTMQFVRPDVHTVCMGLAASMGSFILVGGEITKRLAFPHA 121 The following BLAST results are available for this feature:
BLAST of CX298417 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX298417 ID=CX298417; Name=CX298417; organism=Citrus clementina; type=EST; length=703bpback to top |