CX298417
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX298417 vs. ExPASy Swiss-Prot
Match: CLPP_CHAGL (ATP-dependent Clp protease proteolytic subunit OS=Chaetosphaeridium globosum GN=clpP PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 6.422e-35 Identity = 67/99 (67.68%), Postives = 87/99 (87.88%), Query Frame = 3 Query: 192 LINRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 488 L NRLYRER+LFLGQ V +I+NQ+IG+M+YL+ ++++KD+YL+INSPGG V+PGIAIYDTMQFV P+++TICMG+AASMGSF+L G TKR+A PHA Sbjct: 23 LYNRLYRERILFLGQTVNYEIANQIIGLMLYLNGDDKSKDMYLYINSPGGAVVPGIAIYDTMQFVEPEIRTICMGVAASMGSFILTGGEITKRIALPHA 121
BLAST of CX298417 vs. ExPASy Swiss-Prot
Match: CLPP_STAPU (ATP-dependent Clp protease proteolytic subunit OS=Staurastrum punctulatum GN=clpP PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 8.388e-35 Identity = 69/97 (71.13%), Postives = 84/97 (86.60%), Query Frame = 3 Query: 198 NRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 488 NRLYRERLLFLGQ V+ +I+NQLIGIM+YL+ E+E+KD+Y++INSPGG V+ GI++YD MQFV PDV TICMGLAASMGSF+L G TKR+A PHA Sbjct: 25 NRLYRERLLFLGQNVDDEIANQLIGIMIYLNGEDESKDMYMYINSPGGAVLAGISVYDAMQFVVPDVHTICMGLAASMGSFILTGGEITKRIALPHA 121
BLAST of CX298417 vs. ExPASy Swiss-Prot
Match: CLPP_PSINU (ATP-dependent Clp protease proteolytic subunit OS=Psilotum nudum GN=clpP PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 8.388e-35 Identity = 69/97 (71.13%), Postives = 83/97 (85.57%), Query Frame = 3 Query: 198 NRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 488 NRLYRERLLFLGQ V+ +I+NQLIGIM+YL+ E+E +D+Y +INSPGG V+PGI++YD MQFV PDV TICMGLAASMGSF+L G TKR+A PHA Sbjct: 25 NRLYRERLLFLGQQVDDEIANQLIGIMMYLNGEDENRDMYSYINSPGGAVLPGISVYDAMQFVVPDVHTICMGLAASMGSFILTGGEITKRIALPHA 121
BLAST of CX298417 vs. ExPASy Swiss-Prot
Match: CLPP_ADICA (ATP-dependent Clp protease proteolytic subunit OS=Adiantum capillus-veneris GN=clpP PE=2 SV=2) HSP 1 Score: 147.132 bits (370), Expect = 8.388e-35 Identity = 68/97 (70.10%), Postives = 84/97 (86.60%), Query Frame = 3 Query: 198 NRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 488 NRLYRERLLFLGQ V+ +I+NQLIGIM+YL+ E++ KD+YL++NSPGG V+ GI++YD MQFV PDV TICMGLAASMGSF+LA G T+R+A PHA Sbjct: 25 NRLYRERLLFLGQQVDDEIANQLIGIMMYLNSEDQAKDMYLYVNSPGGAVLAGISVYDAMQFVVPDVHTICMGLAASMGSFILAGGEITRRIALPHA 121
BLAST of CX298417 vs. ExPASy Swiss-Prot
Match: CLPP_ZYGCR (ATP-dependent Clp protease proteolytic subunit OS=Zygnema circumcarinatum GN=clpP PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.440e-34 Identity = 68/97 (70.10%), Postives = 84/97 (86.60%), Query Frame = 3 Query: 198 NRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 488 NRLYR+RLLFLGQ V+ +I+NQLIGIM+YL+ EN++KD+Y++INSPGG V+ GI++YD MQFV PDV TICMGLAASMGSF+L G +KRLA PHA Sbjct: 25 NRLYRDRLLFLGQDVDDEIANQLIGIMIYLNGENQSKDMYMYINSPGGAVLAGISVYDAMQFVVPDVHTICMGLAASMGSFILTGGEISKRLALPHA 121
BLAST of CX298417 vs. ExPASy Swiss-Prot
Match: CLPP_CYCTA (ATP-dependent Clp protease proteolytic subunit OS=Cycas taitungensis GN=clpP PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.582e-33 Identity = 70/97 (72.16%), Postives = 81/97 (83.51%), Query Frame = 3 Query: 198 NRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 488 NRLYRERLLF GQ V+ +I+NQLIGIM+YL+ E+E KD+Y +INSPGG VIPGI+IYD MQFV PDV TICMGLAASMGS +L G TKR+A PHA Sbjct: 18 NRLYRERLLFPGQQVDDEIANQLIGIMMYLNGEDENKDIYPYINSPGGAVIPGISIYDAMQFVVPDVHTICMGLAASMGSSVLTGGEITKRIALPHA 114
BLAST of CX298417 vs. ExPASy Swiss-Prot
Match: CLPP_CHAVU (ATP-dependent Clp protease proteolytic subunit OS=Chara vulgaris GN=clpP PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.011e-33 Identity = 64/99 (64.65%), Postives = 85/99 (85.86%), Query Frame = 3 Query: 192 LINRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 488 + NRLYRERLLFLGQ V+ +I+NQLIGIM+YL+ E+++K+++++INSPGG V+ GIA++D MQ+V PDV TICMG+AASMGSF+L G TKR+A PHA Sbjct: 23 IYNRLYRERLLFLGQRVDDEIANQLIGIMMYLNGEDDSKEMFMYINSPGGSVVAGIAVFDAMQYVGPDVTTICMGMAASMGSFILMGGEMTKRIALPHA 121
BLAST of CX298417 vs. ExPASy Swiss-Prot
Match: CLPP_HUPLU (ATP-dependent Clp protease proteolytic subunit OS=Huperzia lucidula GN=clpP PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 2.983e-32 Identity = 65/97 (67.01%), Postives = 83/97 (85.57%), Query Frame = 3 Query: 198 NRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 488 NRL+RERLLFLGQ V+ +++NQLI IM+Y + E++++D+YL++NSPGG V GI+IYD MQFV PDVQTIC+GLAASMGSF+LA G TKR+A PHA Sbjct: 25 NRLFRERLLFLGQQVDDELANQLICIMIYPNGEDDSRDMYLYVNSPGGAVFAGISIYDAMQFVVPDVQTICIGLAASMGSFVLAGGEITKRIALPHA 121
BLAST of CX298417 vs. ExPASy Swiss-Prot
Match: CLPP_SORBI (ATP-dependent Clp protease proteolytic subunit OS=Sorghum bicolor GN=clpP PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.481e-31 Identity = 62/99 (62.63%), Postives = 79/99 (79.80%), Query Frame = 3 Query: 192 LINRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 488 L N +YRER LFLGQ + +I+N + G+MVYLSIE+ D++LFINSPGGW+I G+AI+DTMQ V PD+ TIC+G+AASM SF+L G TKR+AFPHA Sbjct: 23 LYNVMYRERTLFLGQEIRCEITNHITGLMVYLSIEDGNSDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPHA 121
BLAST of CX298417 vs. ExPASy Swiss-Prot
Match: CLPP_SACOF (ATP-dependent Clp protease proteolytic subunit OS=Saccharum officinarum GN=clpP PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.481e-31 Identity = 62/99 (62.63%), Postives = 79/99 (79.80%), Query Frame = 3 Query: 192 LINRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 488 L N +YRER LFLGQ + +I+N + G+MVYLSIE+ D++LFINSPGGW+I G+AI+DTMQ V PD+ TIC+G+AASM SF+L G TKR+AFPHA Sbjct: 23 LYNVMYRERTLFLGQEIRCEITNHITGLMVYLSIEDGNSDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPHA 121 The following BLAST results are available for this feature:
BLAST of CX298417 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX298417 ID=CX298417; Name=CX298417; organism=Citrus clementina; type=EST; length=703bpback to top |