CX298447
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX298447 vs. ExPASy Swiss-Prot
Match: RS3A_CHLRE (40S ribosomal protein S3a OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_168484 PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 2.604e-30 Identity = 62/89 (69.66%), Postives = 74/89 (83.15%), Query Frame = 1 Query: 1 SQIRQSRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPA 267 +QIRQ R+KM EI+ +A SCDLK LV KFI E IG++IEK+ IYPLQN FIRKVK+LKAPKFD+ KLMEVHGDYSE+VG K++RPA Sbjct: 159 AQIRQIRKKMMEIITREATSCDLKELVAKFIPESIGKDIEKSCQGIYPLQNTFIRKVKVLKAPKFDITKLMEVHGDYSEEVGAKIERPA 247
BLAST of CX298447 vs. ExPASy Swiss-Prot
Match: RS3A2_VITVI (40S ribosomal protein S3a-2 OS=Vitis vinifera GN=GSVIVT00031140001 PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 6.413e-29 Identity = 65/72 (90.28%), Postives = 66/72 (91.67%), Query Frame = 1 Query: 1 SQIRQSRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLME 216 SQIRQ RRKMREIM QAASCDLK LV KFI E+IGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLME Sbjct: 159 SQIRQIRRKMREIMTTQAASCDLKELVRKFIPEMIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLME 230
BLAST of CX298447 vs. ExPASy Swiss-Prot
Match: RS3A_LENED (40S ribosomal protein S1 OS=Lentinula edodes GN=RPS1 PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 9.261e-28 Identity = 56/92 (60.87%), Postives = 74/92 (80.43%), Query Frame = 1 Query: 1 SQIRQSRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEP 276 SQ+R+ R+KM EIM +A +CDLK LV+KF+ E IGREIEKA+ SIYPLQNV++RK KILKAPKFD+ KLME+HG+ +++ G K+ + EP Sbjct: 159 SQVREIRKKMFEIMTREATNCDLKELVQKFVPEAIGREIEKASRSIYPLQNVYVRKAKILKAPKFDVSKLMELHGESTDETGTKIAKDFKEP 250
BLAST of CX298447 vs. ExPASy Swiss-Prot
Match: RS3A_POSPM (40S ribosomal protein S1 OS=Postia placenta (strain ATCC 44394 / Madison 698-R) GN=RPS1 PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 2.695e-27 Identity = 58/92 (63.04%), Postives = 72/92 (78.26%), Query Frame = 1 Query: 1 SQIRQSRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEP 276 SQIRQ R+KM EIM +A+SCDLK LV+KFI E IGREIEKA IYPLQNVF+ K KILKAPKFD+ KL+E+HG+ +++ G +V + EP Sbjct: 159 SQIRQIRQKMFEIMTREASSCDLKELVQKFIPEAIGREIEKAARGIYPLQNVFVHKAKILKAPKFDMSKLLELHGESTDETGTRVVKDFKEP 250
BLAST of CX298447 vs. ExPASy Swiss-Prot
Match: RS3A_OSTLU (40S ribosomal protein S3a OS=Ostreococcus lucimarinus (strain CCE9901) GN=OSTLU_28528 PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 2.695e-27 Identity = 64/96 (66.67%), Postives = 74/96 (77.08%), Query Frame = 1 Query: 1 SQIRQSRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADEPMPE 285 +QIR+ R KM EI+ + +CDLK LV KFI EVIG+EIEK+ + IYPLQNV+IRKVKILKAPKFDL KLMEVHGDYS E VG V RP +E E Sbjct: 159 AQIRKIRAKMVEIITRECTTCDLKELVLKFIPEVIGKEIEKSCAGIYPLQNVYIRKVKILKAPKFDLTKLMEVHGDYSGEAVGEAVARPVEEKAEE 254
BLAST of CX298447 vs. ExPASy Swiss-Prot
Match: RS3A_LACBS (40S ribosomal protein S1 OS=Laccaria bicolor (strain S238N-H82) GN=RPS1 PE=3 SV=2) HSP 1 Score: 120.553 bits (301), Expect = 3.519e-27 Identity = 54/92 (58.70%), Postives = 73/92 (79.35%), Query Frame = 1 Query: 1 SQIRQSRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEP 276 SQ+R+ R+KM EIM +A +CDLK LV+KF+ E IGREIEKA SIYPLQNV++RK KILK+PKFD+ KL+E+HGD +++ G ++ + EP Sbjct: 159 SQVREIRKKMFEIMTREATNCDLKELVQKFVPEAIGREIEKAARSIYPLQNVYVRKAKILKSPKFDMSKLLELHGDSTDETGTRIAKDFKEP 250
BLAST of CX298447 vs. ExPASy Swiss-Prot
Match: RS3A_COPC7 (40S ribosomal protein S1 OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=RPS1 PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 3.519e-27 Identity = 56/92 (60.87%), Postives = 74/92 (80.43%), Query Frame = 1 Query: 1 SQIRQSRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEP 276 +Q+R+ R+KM EI+ +A SCDLK LV+KF+ E IGREIEKA+ SIYPLQNV+IRK KILKAPKFD+ KL+E+HGD +++ G +V + EP Sbjct: 159 AQVRELRKKMFEIITREATSCDLKELVQKFVPEAIGREIEKASRSIYPLQNVYIRKAKILKAPKFDVSKLLELHGDSTDESGTRVTKDFKEP 250
BLAST of CX298447 vs. ExPASy Swiss-Prot
Match: RS3A_TORRU (40S ribosomal protein S3a OS=Tortula ruralis GN=RPS3A PE=2 SV=3) HSP 1 Score: 115.931 bits (289), Expect = 8.668e-26 Identity = 59/80 (73.75%), Postives = 68/80 (85.00%), Query Frame = 1 Query: 19 RRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSS-IYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKV 255 RRKMREIMV +A +CDLK LV KFI EVIG+EI++ S IYPLQ+ FIRKVKILKAPKFDL KLMEVHGDY+E+VG K+ Sbjct: 162 RRKMREIMVKEAQTCDLKELVAKFIPEVIGKEIDEWRSQGIYPLQSTFIRKVKILKAPKFDLMKLMEVHGDYNEEVGAKI 241
BLAST of CX298447 vs. ExPASy Swiss-Prot
Match: RS3A_ASPCL (40S ribosomal protein S1 OS=Aspergillus clavatus GN=rps1 PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.252e-24 Identity = 60/97 (61.86%), Postives = 71/97 (73.20%), Query Frame = 1 Query: 1 SQIRQSRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-YSEDVGVKVDRPADEPMPEA 288 SQIR R+KM EIM +AASC L L K I EVIGREIEKAT IYPLQNV IRKVK+LKAPKFDLG L+ +HG+ ++D G KV+R E + E+ Sbjct: 159 SQIRAIRKKMTEIMQREAASCSLAQLTHKLIPEVIGREIEKATQGIYPLQNVHIRKVKLLKAPKFDLGALLNLHGESTTDDKGQKVEREFKEQVLES 255
BLAST of CX298447 vs. ExPASy Swiss-Prot
Match: RS3A_ASPOR (40S ribosomal protein S1 OS=Aspergillus oryzae GN=rps1 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 2.135e-24 Identity = 60/97 (61.86%), Postives = 71/97 (73.20%), Query Frame = 1 Query: 1 SQIRQSRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-YSEDVGVKVDRPADEPMPEA 288 SQIR R+KM EIM +AASC L L K I EVIGREIEKAT IYPLQNV IRKVK+LKAPKFDLG L+ +HG+ ++D G KV+R E + E+ Sbjct: 159 SQIRAIRKKMTEIMQREAASCTLSQLTTKLIPEVIGREIEKATQGIYPLQNVHIRKVKLLKAPKFDLGALLNLHGESTTDDKGHKVEREFKEQVLES 255 The following BLAST results are available for this feature:
BLAST of CX298447 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 147
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Sequences
The
following sequences are available for this feature:
EST sequence >CX298447 ID=CX298447; Name=CX298447; organism=Citrus clementina; type=EST; length=470bpback to top |