CX298447
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX298447 vs. ExPASy Swiss-Prot
Match: RS3A_AJECH (40S ribosomal protein S1 OS=Ajellomyces capsulata (strain H143) GN=RPS1 PE=3 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 3.527e-19 Identity = 53/97 (54.64%), Postives = 70/97 (72.16%), Query Frame = 1 Query: 1 SQIRQSRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADEPMPEA 288 SQIR R+K+ EI+ +A++ L L K I EVIGREI+K+T IYPLQNV IRKVK+LK+PKFDLG L+ +HG+ S +D G KV+R E + E+ Sbjct: 159 SQIRAIRKKITEIIQREASTRTLAQLT-KLIPEVIGREIDKSTHGIYPLQNVHIRKVKLLKSPKFDLGALLALHGESSTDDKGQKVEREFKEQVLES 254
BLAST of CX298447 vs. ExPASy Swiss-Prot
Match: RS3A2_PICST (40S ribosomal protein S1-B OS=Pichia stipitis GN=RPS1B PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 3.527e-19 Identity = 49/87 (56.32%), Postives = 65/87 (74.71%), Query Frame = 1 Query: 1 SQIRQSRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVD 258 S++R+ R+KM EIM + ++ L L K I EVIGREIEK+T +I+PLQNV IRKVK+LK PKFDLG L+ +HG+ S E+ G KV+ Sbjct: 159 SKLREVRKKMIEIMQREVSNVTLAQLTSKLIPEVIGREIEKSTQTIFPLQNVHIRKVKLLKQPKFDLGALLALHGEGSTEEKGKKVN 245
BLAST of CX298447 vs. ExPASy Swiss-Prot
Match: RS3A1_PICST (40S ribosomal protein S1-A OS=Pichia stipitis GN=RPS1A PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 4.607e-19 Identity = 48/87 (55.17%), Postives = 64/87 (73.56%), Query Frame = 1 Query: 1 SQIRQSRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SEDVGVKVD 258 S++R+ R+KM EIM + ++ L L K I EVIGREIEK+T +I+PLQNV IRKVK+LK PKFDLG L+ +HG+ E+ G KV+ Sbjct: 159 SKLREVRKKMSEIMQREVSAVTLAQLTSKLIPEVIGREIEKSTQTIFPLQNVHIRKVKVLKQPKFDLGALLALHGESGGEEKGRKVN 245
BLAST of CX298447 vs. ExPASy Swiss-Prot
Match: RS3A_PERAM (40S ribosomal protein S3a OS=Periplaneta americana GN=Parcxpwex01 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 6.017e-19 Identity = 47/101 (46.53%), Postives = 66/101 (65.35%), Query Frame = 1 Query: 1 SQIRQSRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD---YSEDVGVKVDRPADEPMPEAPT 294 +Q+R R+KM EI+ S DLK +V K + + I ++IEKA IYPL +V+IRKVK+LK P+F+L KL+E+HGD S++ G +VDRP P T Sbjct: 162 TQVRAIRKKMVEIITRDVTSSDLKEVVNKLLPDSIAKDIEKACQGIYPLHDVYIRKVKVLKKPRFELSKLLELHGDGKGGSDEPGARVDRPEGYEPPVQET 262
BLAST of CX298447 vs. ExPASy Swiss-Prot
Match: RS3A2_CLAL4 (40S ribosomal protein S1-B OS=Clavispora lusitaniae (strain ATCC 42720) GN=RPS1B PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 6.017e-19 Identity = 49/86 (56.98%), Postives = 63/86 (73.26%), Query Frame = 1 Query: 1 SQIRQSRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKV 255 S++R+ R+KM EIM + ++ L L K I EVIGREIEK+T SI PLQN+ IRKVK+LK PKFDLG L+ +HG+ S E+ G KV Sbjct: 159 SKLREVRKKMIEIMQREVSNVTLAQLTSKLIPEVIGREIEKSTQSILPLQNIHIRKVKLLKQPKFDLGSLLALHGEGSTEEKGKKV 244
BLAST of CX298447 vs. ExPASy Swiss-Prot
Match: RS3A1_CLAL4 (40S ribosomal protein S1-A OS=Clavispora lusitaniae (strain ATCC 42720) GN=RPS1A PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 6.017e-19 Identity = 49/86 (56.98%), Postives = 63/86 (73.26%), Query Frame = 1 Query: 1 SQIRQSRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKV 255 S++R+ R+KM EIM + ++ L L K I EVIGREIEK+T SI PLQN+ IRKVK+LK PKFDLG L+ +HG+ S E+ G KV Sbjct: 159 SKLREVRKKMIEIMQREVSNVTLAQLTSKLIPEVIGREIEKSTQSILPLQNIHIRKVKLLKQPKFDLGSLLALHGEGSTEEKGKKV 244
BLAST of CX298447 vs. ExPASy Swiss-Prot
Match: RS3A_IXOSC (40S ribosomal protein S3a OS=Ixodes scapularis PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 7.858e-19 Identity = 50/111 (45.05%), Postives = 69/111 (62.16%), Query Frame = 1 Query: 1 SQIRQSRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE-------------DVGVKVDRPADEPMPEAPT 294 +Q+R R+KM E+MV + +S +LK +V K I IG++IEK+ IYPL +V IRKVK+LK PKF+LGKL+E+HG+ + + GVKVDRP P T Sbjct: 159 NQVRLIRKKMTEMMVVEVSSSNLKDVVNKLIPGSIGKDIEKSCQHIYPLHDVLIRKVKVLKKPKFELGKLLELHGEGTSKGGAASTAAVAKGEEGVKVDRPEGYEPPVLET 269
BLAST of CX298447 vs. ExPASy Swiss-Prot
Match: RS3A_CRYHO (40S ribosomal protein S3a OS=Cryptosporidium hominis GN=Chro.40360 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 7.858e-19 Identity = 50/87 (57.47%), Postives = 62/87 (71.26%), Query Frame = 1 Query: 1 SQIRQSRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVH--GDYSEDVGVKV 255 SQIRQ R+KM EI+ A+A L+ LV+KFI E IG+EIEKA I+PLQ+VFIRKVK+L P FD+ +LME H D E+ G KV Sbjct: 159 SQIRQIRKKMVEIITAEAEGTTLRDLVKKFIPESIGKEIEKACRHIFPLQHVFIRKVKVLSKPSFDVSRLMESHVGADGVEEKGTKV 245
BLAST of CX298447 vs. ExPASy Swiss-Prot
Match: RS3A_BRUMA (40S ribosomal protein S3a OS=Brugia malayi GN=Bm1_27225 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 7.858e-19 Identity = 49/97 (50.52%), Postives = 65/97 (67.01%), Query Frame = 1 Query: 1 SQIRQSRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD---YSEDVGVKVDRPADEPMP 282 S+IRQ R KM E M + DLK + K + + IG++IEKA S IYPLQ+V IRKVKILK PKF++G+LME+H D ++ G K++RP D P Sbjct: 156 SKIRQIRAKMVEYMQKEVQGSDLKDVCHKLVPDSIGKDIEKACSYIYPLQDVCIRKVKILKKPKFEIGRLMEMHTDVSTFTSAEGEKIERPDDYEPP 252
BLAST of CX298447 vs. ExPASy Swiss-Prot
Match: RS3A_CAEBR (40S ribosomal protein S3a OS=Caenorhabditis briggsae GN=rps-1 PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.986e-18 Identity = 49/97 (50.52%), Postives = 64/97 (65.98%), Query Frame = 1 Query: 1 SQIRQSRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGV---KVDRPADEPMP 282 S+IR+ R +M + + CDLK +V K I + IG++IEK S +YPLQ V+IRKVKI+K PK DLG+L ++HGD S VG KVDRP D P Sbjct: 157 SKIRKIRSEMISCIEKEVTGCDLKEVVSKLIPDSIGKDIEKTCSKLYPLQEVYIRKVKIIKRPKIDLGRLHDLHGD-SITVGADGEKVDRPDDYEPP 252 The following BLAST results are available for this feature:
BLAST of CX298447 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 147
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Sequences
The
following sequences are available for this feature:
EST sequence >CX298447 ID=CX298447; Name=CX298447; organism=Citrus clementina; type=EST; length=470bpback to top |