CX298451
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX298451 vs. ExPASy Swiss-Prot
Match: ISPG_SYNS9 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Synechococcus sp. (strain CC9902) GN=ispG PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 7.124e-18 Identity = 42/75 (56.00%), Postives = 55/75 (73.33%), Query Frame = 1 Query: 16 REKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAEP 240 R TSHL G+ IA+MGCIVNGPGEMADAD+GYVG PG I LY G+ +++ + ++ ALIQLI++ G W +P Sbjct: 324 RNATSHLKGLDIAVMGCIVNGPGEMADADYGYVGKGPGIIALYRGREEIRK-VPEKEGVQALIQLIQEDGLWVDP 397
BLAST of CX298451 vs. ExPASy Swiss-Prot
Match: ISPG_CYAA5 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Cyanothece sp. (strain ATCC 51142) GN=ispG PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 7.124e-18 Identity = 43/75 (57.33%), Postives = 53/75 (70.67%), Query Frame = 1 Query: 16 REKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAEP 240 RE T HL G+ IA+MGCIVNGPGEMADAD+GYVG G I LY G+ +K+ + +Q + LI LIK GRW +P Sbjct: 331 REATKHLTGLDIAVMGCIVNGPGEMADADYGYVGKQAGYISLYRGREEIKK-VPEDQGVEELINLIKADGRWIDP 404
BLAST of CX298451 vs. ExPASy Swiss-Prot
Match: ISPG_BACV8 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=ispG PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.215e-17 Identity = 43/76 (56.58%), Postives = 54/76 (71.05%), Query Frame = 1 Query: 10 RDREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAE 237 R + TSHL G+ I IMGCIVNGPGEMADAD+GYVG GKI LY K +++ I +QA + LI+LIK +G + E Sbjct: 538 RIKTATSHLKGLKIGIMGCIVNGPGEMADADYGYVGAGRGKISLYKKKECIEKNIPEDQAVEKLIELIKANGDYTE 613
BLAST of CX298451 vs. ExPASy Swiss-Prot
Match: ISPG_PROMA (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Prochlorococcus marinus GN=ispG PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.073e-17 Identity = 40/75 (53.33%), Postives = 55/75 (73.33%), Query Frame = 1 Query: 16 REKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAEP 240 R+ TSHL G+ IA+MGCIVNGPGEMADAD+GYVG G I LY G+ +++ + ++ AL++LIK G+W +P Sbjct: 334 RDATSHLTGLDIAVMGCIVNGPGEMADADYGYVGKGKGIIALYRGREEIRK-VPEDEGVSALVELIKSDGKWIDP 407
BLAST of CX298451 vs. ExPASy Swiss-Prot
Match: ISPG_MICAN (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Microcystis aeruginosa (strain NIES-843) GN=ispG PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.536e-17 Identity = 43/75 (57.33%), Postives = 50/75 (66.67%), Query Frame = 1 Query: 16 REKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAEP 240 R T HL G+ IA+MGCIVNGPGEMADAD+GYVG G I LY G+ +KR + + LI LIK GRW EP Sbjct: 333 RAATQHLTGLDIAVMGCIVNGPGEMADADYGYVGKQAGYISLYRGREEIKR-VPESEGVSELINLIKADGRWVEP 406
BLAST of CX298451 vs. ExPASy Swiss-Prot
Match: ISPG_SYNY3 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Synechocystis sp. (strain PCC 6803) GN=ispG PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 6.031e-17 Identity = 43/75 (57.33%), Postives = 50/75 (66.67%), Query Frame = 1 Query: 16 REKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKDHGRWAEP 240 RE T HL G+ IA+MGCIVNGPGEMADAD+GYVG G I LY G+ +KR + LI LIK GRW +P Sbjct: 330 REATKHLTGLDIAVMGCIVNGPGEMADADYGYVGKQAGYIALYRGREEIKR-VPETDGVQELINLIKADGRWVDP 403
BLAST of CX298451 vs. ExPASy Swiss-Prot
Match: ISPG_BACTN (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Bacteroides thetaiotaomicron GN=ispG PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.029e-16 Identity = 40/70 (57.14%), Postives = 51/70 (72.86%), Query Frame = 1 Query: 10 RDREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIQLIKD 219 R + TSHL G+ I IMGCIVNGPGEMADAD+GYVG GKI LY GK V++ I E+A + L++ I++ Sbjct: 537 RIKAATSHLKGLKIGIMGCIVNGPGEMADADYGYVGAGRGKISLYKGKVCVEKNIPEEEAVERLLEFIRN 606 The following BLAST results are available for this feature:
BLAST of CX298451 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
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Sequences
The
following sequences are available for this feature:
EST sequence >CX298451 ID=CX298451; Name=CX298451; organism=Citrus clementina; type=EST; length=608bpback to top |