CX298452
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX298452 vs. ExPASy Swiss-Prot
Match: G2OX_PHACN (Gibberellin 2-beta-dioxygenase OS=Phaseolus coccineus GN=GA2OX1 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.139e-16 Identity = 44/114 (38.60%), Postives = 71/114 (62.28%), Query Frame = 2 Query: 350 KVSNYPPCPKPDLIK----GLRAHTDAGGIILLFQDDKVSGLQL-LKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRMSLASFYNPGSDAVIYPAPAL 676 ++++YPPCP+ + G HTD II + + + SGLQ+ L DG W+ VPP + S +N+GD ++V+TNG++KSV+HRV++ T + R+S+ F P I P P++ Sbjct: 181 RLNHYPPCPEVQALNRNLVGFGEHTDPQ-IISVLRSNSTSGLQICLTDGTWVSVPPDQTSFFINVGDALQVMTNGRFKSVKHRVLADTT-KSRLSMIYFGGPALSENIAPLPSV 292
BLAST of CX298452 vs. ExPASy Swiss-Prot
Match: LDOX_PERFR (Leucoanthocyanidin dioxygenase OS=Perilla frutescens GN=ANS PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.039e-15 Identity = 41/120 (34.17%), Postives = 70/120 (58.33%), Query Frame = 2 Query: 299 GYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRMSLASFYNPGSDAVI 658 G L+K GA K++ YP CP+P+L G AHTD + + + V GLQL + +W+ + +SI++++GD +E+++NGKYKS+ HR + + + R+S A F P + ++ Sbjct: 202 GRLEKEVGGAEDLIVQMKINFYPKCPQPELALGWEAHTDVSALTFILHN-MVPGLQLFYEDKWVTAKCVPNSIIMHIGDTLEILSNGKYKSILHRGLVNKE-KVRISWAVFCEPPKEKIV 319
BLAST of CX298452 vs. ExPASy Swiss-Prot
Match: GAOX3_ARATH (Gibberellin 20 oxidase 3 OS=Arabidopsis thaliana GN=20ox3 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.039e-15 Identity = 41/109 (37.61%), Postives = 62/109 (56.88%), Query Frame = 2 Query: 350 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRMSLASFYNPGSDAVIYPAPAL 676 +++ YP C +P+L G H D + +L QD +V GLQ+ D +W +PP H+ VVN+GD +TNG+YKS HR + ++ E R + A F P + V+ P L Sbjct: 227 RLNYYPQCKQPELALGTGPHCDPTSLTILHQD-QVGGLQVFVDNKWQSIPPNPHAFVVNIGDTFMALTNGRYKSCLHRAVVNSERE-RKTFAFFLCPKGEKVVKPPEEL 333
BLAST of CX298452 vs. ExPASy Swiss-Prot
Match: IDS3_HORVU (2'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vulgare GN=IDS3 PE=1 SV=3) HSP 1 Score: 80.4925 bits (197), Expect = 8.999e-15 Identity = 43/105 (40.95%), Postives = 61/105 (58.10%), Query Frame = 2 Query: 353 VSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRMSLASFYNPGSDAVIYPA 667 +++YP CP PD G H D I LL V+GL++ G WI V P ++ VVN G Q+EV+TNG KS+EHR ++ + R S+A+F P + +I PA Sbjct: 191 INHYPSCPNPDKALGQPPHCDRNLITLLLPG-AVNGLEVSYKGDWIKVDPAPNAFVVNFGQQLEVVTNGLLKSIEHRAMTNS-ALARTSVATFIMPTQECLIGPA 293
BLAST of CX298452 vs. ExPASy Swiss-Prot
Match: IDS2_HORVU (Mugineic-acid 3-dioxygenase OS=Hordeum vulgare GN=IDS2 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 8.999e-15 Identity = 44/105 (41.90%), Postives = 61/105 (58.10%), Query Frame = 2 Query: 353 VSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRMSLASFYNPGSDAVIYPA 667 ++ YPP P P GL H D + +L V GL++ G WI V P+ +S+V+N G Q+EV+TNG K+VEHR + E R+S+ASF P D V+ PA Sbjct: 190 INYYPPSPNPSRTLGLPPHCDRDLMTVLLPG-AVPGLEIAYKGGWIKVQPVPNSLVINFGLQLEVVTNGYLKAVEHRAATNF-AEPRLSVASFIVPADDCVVGPA 292
BLAST of CX298452 vs. ExPASy Swiss-Prot
Match: GAOX1_ARATH (Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana GN=20ox1 PE=2 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 1.175e-14 Identity = 42/105 (40.00%), Postives = 60/105 (57.14%), Query Frame = 2 Query: 350 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRMSLASFYNPGSDAVIYP 664 +++ YPPC KPDL G H D + +L QD V+GLQ+ + QW + P + VVN+GD ++N +YKS HR + ++ E R SLA F P D V+ P Sbjct: 228 RLNYYPPCIKPDLTLGTGPHCDPTSLTILHQDH-VNGLQVFVENQWRSIRPNPKAFVVNIGDTFMALSNDRYKSCLHRAVVNSESE-RKSLAFFLCPKKDRVVTP 330
BLAST of CX298452 vs. ExPASy Swiss-Prot
Match: G2OX1_PEA (Gibberellin 2-beta-dioxygenase 1 OS=Pisum sativum GN=GA2OX1 PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.618e-14 Identity = 44/114 (38.60%), Postives = 68/114 (59.65%), Query Frame = 2 Query: 350 KVSNYPPCPKPDL----IKGLRAHTDAGGIILLFQDDKVSGLQL-LKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRMSLASFYNPGSDAVIYPAPAL 676 +V++YP CP+ + + G HTD II + + + SG Q+ L+DG WI VPP S +N+GD ++V+TNG++KSV HRV++ + R+S+ F P I P P+L Sbjct: 177 RVNHYPACPELAINGENLIGFGEHTDPQ-IISILRSNNTSGFQISLRDGSWISVPPDHSSFFINVGDSLQVMTNGRFKSVRHRVLA-NGIDPRLSMIYFCGPPLSEKIAPLPSL 288
BLAST of CX298452 vs. ExPASy Swiss-Prot
Match: GAOX2_ARATH (Gibberellin 20 oxidase 2 OS=Arabidopsis thaliana GN=20ox2 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.833e-14 Identity = 40/105 (38.10%), Postives = 58/105 (55.24%), Query Frame = 2 Query: 350 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRMSLASFYNPGSDAVIYP 664 ++++YPPC PDL G H D + +L QD V+GLQ+ D QW + P + VVN+GD ++NG +KS HR + + R S+A F P D V+ P Sbjct: 226 RLNHYPPCQTPDLTLGTGPHCDPSSLTILHQDH-VNGLQVFVDNQWQSIRPNPKAFVVNIGDTFMALSNGIFKSCLHRAVVNRE-SARKSMAFFLCPKKDKVVKP 328
BLAST of CX298452 vs. ExPASy Swiss-Prot
Match: G3O22_WHEAT (Gibberellin 3-beta-dioxygenase 2-2 OS=Triticum aestivum GN=GA3ox2-2 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.618e-14 Identity = 41/103 (39.81%), Postives = 60/103 (58.25%), Query Frame = 2 Query: 362 YPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDG--QWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRMSLASFYNPGSDAVIYP 664 YP CP P GL AHTD+G + Q V GLQL + G +W+ VP + ++VVN+GD +++TNG++ SV HR + D + R+SL F P + + P Sbjct: 214 YPKCPDPKRALGLIAHTDSGFFTFVLQS-LVPGLQLFRHGPDRWVTVPAVPGAMVVNVGDLFQILTNGRFHSVYHRAVVNRDSD-RISLGYFLGPPAHVKVAP 314
BLAST of CX298452 vs. ExPASy Swiss-Prot
Match: G3O21_WHEAT (Gibberellin 3-beta-dioxygenase 2-1 OS=Triticum aestivum GN=GA3ox2-1 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.618e-14 Identity = 41/103 (39.81%), Postives = 60/103 (58.25%), Query Frame = 2 Query: 362 YPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDG--QWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRMSLASFYNPGSDAVIYP 664 YP CP P GL AHTD+G + Q V GLQL + G +W+ VP + ++VVN+GD +++TNG++ SV HR + D + R+SL F P + + P Sbjct: 214 YPKCPDPKRALGLIAHTDSGFFTFVLQS-LVPGLQLFRHGPDRWVTVPAVPGAMVVNVGDLFQILTNGRFHSVYHRAVVNRDSD-RISLGYFLGPPAHVKVAP 314 The following BLAST results are available for this feature:
BLAST of CX298452 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 81
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Sequences
The
following sequences are available for this feature:
EST sequence >CX298452 ID=CX298452; Name=CX298452; organism=Citrus clementina; type=EST; length=678bpback to top |