CX298452
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX298452 vs. ExPASy Swiss-Prot
Match: G3O23_WHEAT (Gibberellin 3-beta-dioxygenase 2-3 OS=Triticum aestivum GN=GA3ox2-3 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.216e-13 Identity = 40/103 (38.83%), Postives = 60/103 (58.25%), Query Frame = 2 Query: 362 YPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDG--QWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRMSLASFYNPGSDAVIYP 664 YP CP P GL AHTD+G + Q V GLQL + G +W+ VP + ++VVN+GD +++TNG++ SV HR + + + R+SL F P + + P Sbjct: 214 YPKCPDPKRALGLIAHTDSGFFTFVLQS-LVPGLQLFRHGPDRWVTVPAVPGAMVVNVGDLFQILTNGRFHSVYHRAVVNRESD-RISLGYFLGPPAHVKVAP 314
BLAST of CX298452 vs. ExPASy Swiss-Prot
Match: G2OX1_ARATH (Gibberellin 2-beta-dioxygenase 1 OS=Arabidopsis thaliana GN=GA2OX1 PE=2 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 2.895e-13 Identity = 44/117 (37.61%), Postives = 65/117 (55.56%), Query Frame = 2 Query: 350 KVSNYPPCPKPDL-------IKGLRAHTDAGGIILLFQDDKVSGLQL-LKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRMSLASFYNPGSDAVIYPAPAL 676 ++++YPPCP + + G HTD II + + + SGLQ+ L DG WI VPP S N+GD ++V+TNG++KSV HRV++ + R+S+ F P I P L Sbjct: 171 RLNHYPPCPLSNKKTNGGKNVIGFGEHTDPQ-IISVLRSNNTSGLQINLNDGSWISVPPDHTSFFFNVGDSLQVMTNGRFKSVRHRVLANCK-KSRVSMIYFAGPSLTQRIAPLTCL 285
BLAST of CX298452 vs. ExPASy Swiss-Prot
Match: LDOX_MAIZE (Leucoanthocyanidin dioxygenase OS=Zea mays GN=A2 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.781e-13 Identity = 39/110 (35.45%), Postives = 65/110 (59.09%), Query Frame = 2 Query: 350 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRMSLASFYNPGSDAV-IYPAPAL 676 K++ YP CP+P+L G+ AHTD + + + V GLQ+L +W+ +I+V++GD +E+++NG+Y SV HR + + R+S F P D+V ++P P L Sbjct: 235 KINYYPRCPQPELAVGVEAHTDVSALSFILHNG-VPGLQVLHGARWVTARHEPGTIIVHVGDALEILSNGRYTSVLHRGLVNREAV-RISWVVFCEPPPDSVLLHPLPEL 342
BLAST of CX298452 vs. ExPASy Swiss-Prot
Match: G2OX7_ARATH (Gibberellin 2-beta-dioxygenase 7 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.449e-13 Identity = 40/97 (41.24%), Postives = 59/97 (60.82%), Query Frame = 2 Query: 350 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRMSLASFYNP 640 +++ Y P + GL HTD + +L QD ++ GL+L +GQWI V P ++ VN+GD + ++NG Y+SV HRVIS + E RMS+A F P Sbjct: 197 RLNKYHPSVFGSEVFGLVPHTDTSFLTILSQD-QIGGLELENNGQWISVKPCLEALTVNIGDMFQALSNGVYQSVRHRVISPANIE-RMSIAFFVCP 291
BLAST of CX298452 vs. ExPASy Swiss-Prot
Match: GAO1B_WHEAT (Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN=GA20ox1B PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.876e-12 Identity = 40/109 (36.70%), Postives = 59/109 (54.13%), Query Frame = 2 Query: 350 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRMSLASFYNPGSDAVIYPAPAL 676 +++ YPPC +P G H D + +L QD+ V GLQ+ +G+W + P + VVN+GD ++NG+YKS HR + + R SLA F P D V+ P L Sbjct: 205 RLNYYPPCQRPMETLGTGPHCDPTSLTILHQDN-VGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHRAVVNSK-VPRKSLAFFLCPEMDKVVAPPGTL 311
BLAST of CX298452 vs. ExPASy Swiss-Prot
Match: G2OX2_ARATH (Gibberellin 2-beta-dioxygenase 2 OS=Arabidopsis thaliana GN=GA2OX2 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.876e-12 Identity = 42/113 (37.17%), Postives = 68/113 (60.18%), Query Frame = 2 Query: 350 KVSNYPPCPKP--DLIK-GLRAHTDAGGIILLFQDDKVSGLQL-LKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRMSLASFYNPGSDAVIYPAPAL 676 ++++YP + ++K G HTD II + + + +GLQ+ +KDG W+ VPP S +N+GD ++V+TNG++KSV+HRV++ T R+S+ F P I P P L Sbjct: 185 RLNHYPAAEEEAEKMVKVGFGEHTDPQ-IISVLRSNNTAGLQICVKDGSWVAVPPDHSSFFINVGDALQVMTNGRFKSVKHRVLADT-RRSRISMIYFGGPPLSQKIAPLPCL 295
BLAST of CX298452 vs. ExPASy Swiss-Prot
Match: HY6H_HYONI (Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger GN=H6H PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.451e-12 Identity = 44/107 (41.12%), Postives = 59/107 (55.14%), Query Frame = 2 Query: 362 YPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQ--LLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRMSLASFYNPGSDAVIYPAPAL 676 YPPCP P G H D I LL QD + GLQ ++KD WI V P+ + VVNLG ++VITN K++ HRV++ + R+S+A+ P I PA L Sbjct: 202 YPPCPDPSSTLGSGGHYDGNLITLLQQD--LPGLQQLIVKDATWIAVQPIPTAFVVNLGLTLKVITNEKFEGSIHRVVTDPTRD-RVSIATLIGPDYSCTIEPAKEL 305
BLAST of CX298452 vs. ExPASy Swiss-Prot
Match: GAO1D_WHEAT (Gibberellin 20 oxidase 1-D OS=Triticum aestivum GN=GA20ox1D PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.201e-12 Identity = 40/109 (36.70%), Postives = 59/109 (54.13%), Query Frame = 2 Query: 350 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRMSLASFYNPGSDAVIYPAPAL 676 +++ YPPC +P G H D + +L QD+ V GLQ+ +G+W + P + VVN+GD ++NG+YKS HR + + R SLA F P D V+ P L Sbjct: 205 RLNYYPPCQRPLETLGTGPHCDPTSLTILHQDN-VGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHRAVVNS-RVPRKSLAFFLCPEMDKVVAPPGTL 311
BLAST of CX298452 vs. ExPASy Swiss-Prot
Match: GAO1A_WHEAT (Gibberellin 20 oxidase 1-A OS=Triticum aestivum GN=GA20ox1A PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.201e-12 Identity = 40/109 (36.70%), Postives = 59/109 (54.13%), Query Frame = 2 Query: 350 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRMSLASFYNPGSDAVIYPAPAL 676 +++ YPPC +P G H D + +L QD+ V GLQ+ +G+W + P + VVN+GD ++NG+YKS HR + + R SLA F P D V+ P L Sbjct: 205 RLNYYPPCQRPLETLGTGPHCDPTSLTILHQDN-VGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHRAVVNS-RVPRKSLAFFLCPEMDKVVAPPGTL 311
BLAST of CX298452 vs. ExPASy Swiss-Prot
Match: G3OX4_ARATH (Gibberellin 3-beta-dioxygenase 4 OS=Arabidopsis thaliana GN=At1g80330 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.622e-11 Identity = 40/112 (35.71%), Postives = 64/112 (57.14%), Query Frame = 2 Query: 350 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLK-DGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRV-ISQTDGEGRMSLASFY-NPGSDAVIYPAPAL 676 ++++YP CP+P+ GL AHTD+ + +L Q + GLQ+ + + W+ V P +VVN+GD +++NGK SV HR ++ T R+S+A + P D I P L Sbjct: 208 RLNHYPVCPEPERAMGLAAHTDSTILTILHQSN-TGGLQVFREESGWVTVEPAPGVLVVNIGDLFHILSNGKIPSVVHRAKVNHT--RSRISIAYLWGGPAGDVQIAPISKL 316 The following BLAST results are available for this feature:
BLAST of CX298452 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 81
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Sequences
The
following sequences are available for this feature:
EST sequence >CX298452 ID=CX298452; Name=CX298452; organism=Citrus clementina; type=EST; length=678bpback to top |