CX298467
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX298467 vs. ExPASy Swiss-Prot
Match: CESA9_ARATH (Probable cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Arabidopsis thaliana GN=CESA9 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.267e-25 Identity = 52/75 (69.33%), Postives = 62/75 (82.67%), Query Frame = 3 Query: 15 SWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNGQCGINC 239 SWGPLFG+LFFA+WVI HLYPFLKGLLG+Q+R PTI++VWSILLASI +LLWVRV+PF S D CG++C Sbjct: 1014 SWGPLFGRLFFALWVIVHLYPFLKGLLGKQDRVPTIILVWSILLASILTLLWVRVNPFVSKDGPVLE--ICGLDC 1086
BLAST of CX298467 vs. ExPASy Swiss-Prot
Match: CESA2_ARATH (Cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Arabidopsis thaliana GN=CESA2 PE=1 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.162e-24 Identity = 49/75 (65.33%), Postives = 61/75 (81.33%), Query Frame = 3 Query: 15 SWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNGQCGINC 239 SWGPLFG+LFFA+WVI HLYPFLKG+LG+Q++ PTI++VWSILLASI +LLWVRV+PF + CG+NC Sbjct: 1010 SWGPLFGRLFFALWVIVHLYPFLKGMLGKQDKMPTIIVVWSILLASILTLLWVRVNPFVAKGGPVLE--ICGLNC 1082
BLAST of CX298467 vs. ExPASy Swiss-Prot
Match: CESA6_ARATH (Cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Arabidopsis thaliana GN=CESA6 PE=1 SV=2) HSP 1 Score: 110.153 bits (274), Expect = 1.051e-23 Identity = 50/75 (66.67%), Postives = 61/75 (81.33%), Query Frame = 3 Query: 15 SWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNGQCGINC 239 SWGPLFG+LFFA+WVI HLYPFLKGLLG+Q+R PTI++VWSILLASI +LLWVRV+PF + CG++C Sbjct: 1011 SWGPLFGRLFFALWVIIHLYPFLKGLLGKQDRMPTIIVVWSILLASILTLLWVRVNPFVAKGGPILE--ICGLDC 1083
BLAST of CX298467 vs. ExPASy Swiss-Prot
Match: CESA5_ARATH (Cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Arabidopsis thaliana GN=CESA5 PE=1 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 2.342e-23 Identity = 50/75 (66.67%), Postives = 60/75 (80.00%), Query Frame = 3 Query: 15 SWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNGQCGINC 239 SWGPLFG+LFFA WVI HLYPFLKGLLG+Q+R PTI++VWSILLASI +LLWVRV+PF + CG++C Sbjct: 996 SWGPLFGRLFFAFWVILHLYPFLKGLLGKQDRMPTIILVWSILLASILTLLWVRVNPFVAKGGPILE--ICGLDC 1068
BLAST of CX298467 vs. ExPASy Swiss-Prot
Match: CSLD2_ORYSJ (Cellulose synthase-like protein D2 OS=Oryza sativa subsp. japonica GN=CSLD2 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.054e-15 Identity = 36/59 (61.02%), Postives = 44/59 (74.58%), Query Frame = 3 Query: 9 LQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDP 185 + W L G +FF+ WV+AHLYPF KGL+GR+ RTPTIV VWS LLA SLLWV ++P Sbjct: 1098 IPQWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLLAITISLLWVAINP 1156
BLAST of CX298467 vs. ExPASy Swiss-Prot
Match: CSLD2_ORYSI (Cellulose synthase-like protein D2 OS=Oryza sativa subsp. indica GN=CSLD2 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.054e-15 Identity = 36/59 (61.02%), Postives = 44/59 (74.58%), Query Frame = 3 Query: 9 LQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDP 185 + W L G +FF+ WV+AHLYPF KGL+GR+ RTPTIV VWS LLA SLLWV ++P Sbjct: 1098 IPQWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLLAITISLLWVAINP 1156
BLAST of CX298467 vs. ExPASy Swiss-Prot
Match: CSLD1_ORYSJ (Cellulose synthase-like protein D1 OS=Oryza sativa subsp. japonica GN=CSLD1 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.347e-15 Identity = 38/74 (51.35%), Postives = 48/74 (64.86%), Query Frame = 3 Query: 9 LQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNGQCG 230 + W L G +FF+ WV+AHLYPF KGL+GR+ RTPTIV VWS L+A SLLW+ + P A +N Q G Sbjct: 1053 IPQWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVYVWSGLVAITISLLWIAIKP-----PSAQANSQLG 1121
BLAST of CX298467 vs. ExPASy Swiss-Prot
Match: CSLD1_ORYSI (Cellulose synthase-like protein D1 OS=Oryza sativa subsp. indica GN=CSLD1 PE=2 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 2.347e-15 Identity = 38/74 (51.35%), Postives = 48/74 (64.86%), Query Frame = 3 Query: 9 LQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNGQCG 230 + W L G +FF+ WV+AHLYPF KGL+GR+ RTPTIV VWS L+A SLLW+ + P A +N Q G Sbjct: 1053 IPQWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVYVWSGLVAITISLLWIAIKP-----PSAQANSQLG 1121
BLAST of CX298467 vs. ExPASy Swiss-Prot
Match: CSLD3_ARATH (Cellulose synthase-like protein D3 OS=Arabidopsis thaliana GN=CSLD3 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.065e-15 Identity = 35/59 (59.32%), Postives = 44/59 (74.58%), Query Frame = 3 Query: 9 LQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDP 185 + W L G +FF+ WV+AHLYPF KGL+GR+ RTPTIV VWS L+A SLLWV ++P Sbjct: 1073 IPQWSKLIGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVYVWSGLVAITISLLWVAINP 1131
BLAST of CX298467 vs. ExPASy Swiss-Prot
Match: CSLD2_ARATH (Cellulose synthase-like protein D2 OS=Arabidopsis thaliana GN=CSLD2 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.003e-15 Identity = 35/56 (62.50%), Postives = 43/56 (76.79%), Query Frame = 3 Query: 18 WGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDP 185 W L G +FF+ WV+AHLYPF KGL+GR+ RTPTIV VWS L+A SLLWV ++P Sbjct: 1076 WSKLIGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVYVWSGLVAITISLLWVAINP 1131 The following BLAST results are available for this feature:
BLAST of CX298467 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 39
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX298467 ID=CX298467; Name=CX298467; organism=Citrus clementina; type=EST; length=674bpback to top |