CX298467
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX298467 vs. ExPASy Swiss-Prot
Match: CSLD4_ARATH (Cellulose synthase-like protein D4 OS=Arabidopsis thaliana GN=CSLD4 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.165e-14 Identity = 36/71 (50.70%), Postives = 45/71 (63.38%), Query Frame = 3 Query: 18 WGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNGQCG 230 W L G FF+ WV+AHLYPF KGL+GR+ +TPTIV VW+ L+A SLLW ++P T A G G Sbjct: 1037 WSKLIGGAFFSFWVLAHLYPFAKGLMGRRGKTPTIVFVWAGLIAITISLLWTAINPNTGPAAAAEGVGGGG 1107
BLAST of CX298467 vs. ExPASy Swiss-Prot
Match: CSLD4_ORYSJ (Cellulose synthase-like protein D4 OS=Oryza sativa subsp. japonica GN=CSLD4 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.521e-14 Identity = 34/56 (60.71%), Postives = 41/56 (73.21%), Query Frame = 3 Query: 18 WGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDP 185 W L G FF+ WV+ HLYPF KGLLGR+ R PTIV VWS L++ I SLLWV ++P Sbjct: 1144 WSKLLGGAFFSFWVLCHLYPFAKGLLGRRGRVPTIVFVWSGLISMIISLLWVYINP 1199
BLAST of CX298467 vs. ExPASy Swiss-Prot
Match: CSLD5_ARATH (Cellulose synthase-like protein D5 OS=Arabidopsis thaliana GN=CSLD5 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.987e-14 Identity = 34/56 (60.71%), Postives = 42/56 (75.00%), Query Frame = 3 Query: 18 WGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDP 185 W L G +FF+ WV+ HLYPF KGL+GR+ R PTIV VWS LL+ I SLLWV ++P Sbjct: 1113 WSKLVGGVFFSFWVLCHLYPFAKGLMGRRGRVPTIVFVWSGLLSIIVSLLWVYINP 1168
BLAST of CX298467 vs. ExPASy Swiss-Prot
Match: CSLD3_ORYSJ (Cellulose synthase-like protein D3 OS=Oryza sativa subsp. japonica GN=CSLD3 PE=2 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 1.987e-14 Identity = 38/68 (55.88%), Postives = 46/68 (67.65%), Query Frame = 3 Query: 18 WGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNG 221 WG G FF+ WV+AHL PF KGL+GR+ +TPTIV VWS LL+ SLLWV + P +ANSNG Sbjct: 1075 WGKFIGGGFFSFWVLAHLNPFAKGLMGRRGKTPTIVFVWSGLLSITVSLLWVAISP-----PEANSNG 1137
BLAST of CX298467 vs. ExPASy Swiss-Prot
Match: CSLD1_ARATH (Cellulose synthase-like protein D1 OS=Arabidopsis thaliana GN=CSLD1 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.781e-14 Identity = 30/59 (50.85%), Postives = 43/59 (72.88%), Query Frame = 3 Query: 9 LQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDP 185 + WG L G +FF++WV+ H+YPF KGL+GR+ + PTIV VWS L++ SLLW+ + P Sbjct: 966 IPQWGKLMGGIFFSLWVLTHMYPFAKGLMGRRGKVPTIVYVWSGLVSITVSLLWITISP 1024
BLAST of CX298467 vs. ExPASy Swiss-Prot
Match: CSLD5_ORYSJ (Cellulose synthase-like protein D5 OS=Oryza sativa subsp. japonica GN=CSLD5 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.172e-12 Identity = 33/67 (49.25%), Postives = 45/67 (67.16%), Query Frame = 3 Query: 9 LQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKA 209 + + L G FF+ WV+AH YPF KGL+GR+ RTPTIV VW+ L++ SLLW+ + P DD+ A Sbjct: 942 IPQYSKLLGGGFFSFWVLAHYYPFAKGLMGRRGRTPTIVYVWAGLISITVSLLWITISP--PDDSVA 1006
BLAST of CX298467 vs. ExPASy Swiss-Prot
Match: CSLD5_ORYSI (Putative cellulose synthase-like protein D5 OS=Oryza sativa subsp. indica GN=CSLD5 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.172e-12 Identity = 33/67 (49.25%), Postives = 45/67 (67.16%), Query Frame = 3 Query: 9 LQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKA 209 + + L G FF+ WV+AH YPF KGL+GR+ RTPTIV VW+ L++ SLLW+ + P DD+ A Sbjct: 942 IPQYSKLLGGGFFSFWVLAHYYPFAKGLMGRRGRTPTIVYVWAGLISITVSLLWITISP--PDDSVA 1006
BLAST of CX298467 vs. ExPASy Swiss-Prot
Match: CSLD6_ARATH (Putative cellulose synthase-like protein D6 OS=Arabidopsis thaliana GN=CSLD6 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.685e-11 Identity = 29/54 (53.70%), Postives = 38/54 (70.37%), Query Frame = 3 Query: 18 WGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRV 179 W L G FFA WV+ H+YPF KGL+GR +TPT+V VWS L+A SLL++ + Sbjct: 913 WSNLLGGTFFASWVLLHMYPFAKGLMGRGGKTPTVVYVWSGLIAICLSLLYITI 966
BLAST of CX298467 vs. ExPASy Swiss-Prot
Match: CESAB_ORYSJ (Putative cellulose synthase A catalytic subunit 11 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA11 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.507e-11 Identity = 32/65 (49.23%), Postives = 44/65 (67.69%), Query Frame = 3 Query: 3 GWLQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRT-PTIVIVWSILLASIFSLLWVRVDPFTS 194 G+ QSWG L KL A WV+AHL FL+GLL ++R PTI ++WS++ S+ SLLWV F++ Sbjct: 784 GYYQSWGALGAKLALAGWVVAHLQGFLRGLLAPRDRAPPTIAVLWSVVFVSVASLLWVHAASFSA 848 The following BLAST results are available for this feature:
BLAST of CX298467 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 39
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX298467 ID=CX298467; Name=CX298467; organism=Citrus clementina; type=EST; length=674bpback to top |