CX298468
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX298468 vs. ExPASy Swiss-Prot
Match: RL20_WOLPM (50S ribosomal protein L20 OS=Wolbachia pipientis wMel GN=rplT PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.847e-29 Identity = 61/97 (62.89%), Postives = 76/97 (78.35%), Query Frame = -3 Query: 335 KEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGVNYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVD 625 K+I KLAKG+RGRAK+C RIA +RVEKALQY+YRDRR +KRD RSLWI RINA R+HG+ YG FMHGL I LNRK+L+E++++ F LV+ Sbjct: 15 KKILKLAKGYRGRAKSCYRIALQRVEKALQYAYRDRRTRKRDFRSLWIIRINAAAREHGLTYGRFMHGLTLAGIDLNRKILAEMAVNYKDDFAKLVE 111
BLAST of CX298468 vs. ExPASy Swiss-Prot
Match: RL20_METRJ (50S ribosomal protein L20 OS=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) GN=rplT PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.413e-29 Identity = 59/106 (55.66%), Postives = 80/106 (75.47%), Query Frame = -3 Query: 308 KEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGVNYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDISRNAFPGN 625 K++ K AKG+ GR KN IRIA++ VEK +QY+YRDR+NKKR R+LWIQR+NA R+HG+ Y F+ GL K I ++RK LSEL++HEP SF A+V+ ++ A P N Sbjct: 15 KKVLKAAKGYYGRRKNTIRIAKQAVEKGMQYAYRDRKNKKRTFRALWIQRLNAAVREHGLTYSRFIDGLAKSGIVVDRKALSELAIHEPASFAAVVEKAKAALPQN 120
BLAST of CX298468 vs. ExPASy Swiss-Prot
Match: RL20_ORITB (50S ribosomal protein L20 OS=Orientia tsutsugamushi (strain Boryong) GN=rplT PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.116e-29 Identity = 60/109 (55.05%), Postives = 83/109 (76.15%), Query Frame = -3 Query: 320 KRERMNKKEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGVNYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDISRNA 646 K + K+I KLAKG+RGRAKNC RIA ++VEKALQYSYRDRRN+KR R+LWIQRINA RQ+ + Y F++GL + NI ++RKV++ L++H SF LV++++ + Sbjct: 8 KVNKNRHKKILKLAKGYRGRAKNCFRIAIQKVEKALQYSYRDRRNRKRQFRALWIQRINAAVRQYDMTYSQFINGLKQANITVDRKVMANLAVHNADSFVHLVELTKKS 116
BLAST of CX298468 vs. ExPASy Swiss-Prot
Match: RL20_METPB (50S ribosomal protein L20 OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=rplT PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.116e-29 Identity = 57/104 (54.81%), Postives = 81/104 (77.88%), Query Frame = -3 Query: 314 KEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGVNYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDISRNAFP 625 K++ K AKG+ GR KN IRIA++ VEK LQY+YRDR+NKKR R+LWIQR+NA R+HG+ Y F++ L K I+++RK LSEL++HEP +F A+V+ +++A P Sbjct: 15 KKVLKAAKGYYGRRKNTIRIAKQAVEKGLQYAYRDRKNKKRTFRALWIQRLNAAVREHGLTYSRFINALAKSGIEVDRKALSELAIHEPAAFAAVVEKAKSALP 118
BLAST of CX298468 vs. ExPASy Swiss-Prot
Match: RL20_WOLTR (50S ribosomal protein L20 OS=Wolbachia sp. subsp. Brugia malayi (strain TRS) GN=rplT PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.375e-29 Identity = 59/97 (60.82%), Postives = 75/97 (77.32%), Query Frame = -3 Query: 335 KEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGVNYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVD 625 K+I LAKG+RGRAK+C RIA +RVEKALQY+YRDRRN+KRD RSLWI RINA R+HG+ YG FMHGL + LNRK+L+E++++ F L + Sbjct: 15 KKILNLAKGYRGRAKSCYRIALQRVEKALQYAYRDRRNRKRDFRSLWIIRINAAAREHGLTYGRFMHGLALAGVDLNRKILAEMAVNYKDDFTKLAE 111
BLAST of CX298468 vs. ExPASy Swiss-Prot
Match: RL20_METEP (50S ribosomal protein L20 OS=Methylobacterium extorquens (strain PA1) GN=rplT PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.197e-28 Identity = 56/104 (53.85%), Postives = 81/104 (77.88%), Query Frame = -3 Query: 314 KEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGVNYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDISRNAFP 625 K++ K AKG+ GR KN IRIA++ VEK LQY+YRDR+NKKR R+LWIQR+NA R+HG+ Y F++ L + I+++RK LSEL++HEP +F A+V+ +++A P Sbjct: 15 KKVLKAAKGYYGRRKNTIRIAKQAVEKGLQYAYRDRKNKKRTFRALWIQRLNAAVREHGLTYSRFINALAQSGIEVDRKALSELAIHEPAAFAAVVEKAKSALP 118
BLAST of CX298468 vs. ExPASy Swiss-Prot
Match: RL20_MARMM (50S ribosomal protein L20 OS=Maricaulis maris (strain MCS10) GN=rplT PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.197e-28 Identity = 61/102 (59.80%), Postives = 80/102 (78.43%), Query Frame = -3 Query: 320 KEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGVNYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDISRNA 625 K + K AKG+ GR KN R+A + VEKA QY+YRDRR KKR+ R+LWIQRINAG RQH ++Y FM+GL K I+++RKVL++++MHEP +FKALVD +R A Sbjct: 15 KSVIKKAKGYYGRRKNTFRVAVQAVEKAGQYAYRDRRAKKRNFRALWIQRINAGARQHEMSYSVFMNGLTKAGIEVDRKVLADIAMHEPDAFKALVDQARAA 116
BLAST of CX298468 vs. ExPASy Swiss-Prot
Match: RL20_METS4 (50S ribosomal protein L20 OS=Methylobacterium sp. (strain 4-46) GN=rplT PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.564e-28 Identity = 58/104 (55.77%), Postives = 79/104 (75.96%), Query Frame = -3 Query: 314 KEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGVNYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDISRNAFP 625 K++ K AKG+ GR KN IRIA++ VEK LQY+YRDR+N+KR+ RSLWIQR+NA R+HG+ Y + GL K I ++RK LSEL++HEP +F A+V+ +R A P Sbjct: 15 KKVLKAAKGYYGRRKNTIRIAKQAVEKGLQYAYRDRKNRKRNFRSLWIQRLNAAAREHGLTYSRLIDGLAKAGIVVDRKALSELAIHEPAAFAAVVEQARAALP 118
BLAST of CX298468 vs. ExPASy Swiss-Prot
Match: RL20_METNO (50S ribosomal protein L20 OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=rplT PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.564e-28 Identity = 57/104 (54.81%), Postives = 79/104 (75.96%), Query Frame = -3 Query: 314 KEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGVNYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDISRNAFP 625 K++ K AKG+ GR KN IRIA++ VEK LQY+YRDR+N+KR R+LWIQR+NA R+HG+ Y F+ GL K I ++RK LSEL++HEP +F A+V+ ++ A P Sbjct: 15 KKVLKAAKGYYGRRKNTIRIAKQAVEKGLQYAYRDRKNRKRSFRALWIQRLNAAVREHGLTYSRFIDGLAKAGIVVDRKALSELAIHEPAAFSAVVEKAKAALP 118
BLAST of CX298468 vs. ExPASy Swiss-Prot
Match: RL20_MAGSA (50S ribosomal protein L20 OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=rplT PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.043e-28 Identity = 59/102 (57.84%), Postives = 82/102 (80.39%), Query Frame = -3 Query: 320 KEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGVNYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDISRNA 625 K+I KLAKG+RGR+ C R+A ++VEKAL+Y+YRDRR KKR+ R+LWIQRINAG+R +G+ Y FM GL K I L+RKVLS++++ EP +FK+LV+ ++ A Sbjct: 15 KKILKLAKGYRGRSSTCFRVAIQKVEKALRYAYRDRRAKKRNFRALWIQRINAGSRAYGLPYSRFMDGLKKAGIALDRKVLSDIAIREPDAFKSLVEKAQAA 116 The following BLAST results are available for this feature:
BLAST of CX298468 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX298468 ID=CX298468; Name=CX298468; organism=Citrus clementina; type=EST; length=714bpback to top |