CX298468
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX298468 vs. ExPASy Swiss-Prot
Match: RL20_CITK8 (50S ribosomal protein L20 OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=rplT PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.200e-20 Identity = 46/106 (43.40%), Postives = 73/106 (68.87%), Query Frame = -3 Query: 320 RMNKKEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGVNYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDISRNA 637 R K+I K AKG+ G R+A + V KA QY+YRDRR +KR R LWI RINA RQ+G++Y F++GL K +++++RK+L+++++ + +F ALV+ ++ A Sbjct: 11 RARHKKILKQAKGYYGARSRVYRVAFQAVIKAGQYAYRDRRQRKRQFRQLWIARINAAARQNGISYSKFINGLKKASVEIDRKILADIAVFDKVAFTALVEKAKAA 116
BLAST of CX298468 vs. ExPASy Swiss-Prot
Match: RL20_CHLCH (50S ribosomal protein L20 OS=Chlorobium chlorochromatii (strain CaD3) GN=rplT PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.200e-20 Identity = 47/100 (47.00%), Postives = 66/100 (66.00%), Query Frame = -3 Query: 338 RMNKKEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGVNYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALV 637 R +K I K AKGF G N + + + V+KA QY+YRDRR KKR RSLWI RINA R +G Y ++G+ K NIQ++RK L+E+++ + +F A+V Sbjct: 11 RARRKRILKKAKGFWGARGNVLTVVKHSVDKAEQYAYRDRRAKKRTFRSLWIMRINAAARLNGTTYSQLINGMAKNNIQIDRKALAEIAVKDAAAFSAIV 110
BLAST of CX298468 vs. ExPASy Swiss-Prot
Match: RL20_ACTP7 (50S ribosomal protein L20 OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=rplT PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.200e-20 Identity = 45/106 (42.45%), Postives = 74/106 (69.81%), Query Frame = -3 Query: 320 RMNKKEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGVNYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDISRNA 637 R K++ K AKG+ G R+A + V KA QY+YRDRR +KR R LWI RINA RQ+G++Y F++GL K +++++RK+L+++++ + +F ALV+ +++A Sbjct: 11 RARHKKVLKAAKGYYGARSRVYRVAFQAVIKAGQYAYRDRRQRKRQFRQLWIARINAAARQNGLSYSKFINGLKKVSVEIDRKILADIAVFDKVAFAALVEKAKSA 116
BLAST of CX298468 vs. ExPASy Swiss-Prot
Match: RK20_LEPTE (50S ribosomal protein L20, chloroplastic OS=Leptosira terrestris GN=rpl20 PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.200e-20 Identity = 47/105 (44.76%), Postives = 69/105 (65.71%), Query Frame = -3 Query: 323 RMNKKEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGVNYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDISRN 637 R +K+I K+ KGFRG + R A ++ KAL+YSYRDR +KR+ R+LWI RINA R G+NY F++ + K I +NRK LS+L++++ F +L+ I N Sbjct: 11 RKRRKKILKITKGFRGSSSTLFRTANQQQMKALRYSYRDRLTRKRNFRALWIVRINAMARHLGLNYNQFINNITKAQIIINRKTLSQLAIYDSTIFSSLISIKNN 115
BLAST of CX298468 vs. ExPASy Swiss-Prot
Match: RL20_YERPY (50S ribosomal protein L20 OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=rplT PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.568e-20 Identity = 46/106 (43.40%), Postives = 73/106 (68.87%), Query Frame = -3 Query: 320 RMNKKEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGVNYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDISRNA 637 R K+I K AKG+ G R+A + V KA QY+YRDRR +KR R LWI RINA RQ+G++Y F++GL K +++++RK+L+++++ + +F ALV+ ++ A Sbjct: 11 RARHKKILKQAKGYYGARSRVYRVAFQAVIKAGQYAYRDRRQRKRQFRQLWIARINAAARQNGLSYSRFINGLKKASVEIDRKILADIAVFDKVAFSALVEKAKAA 116
BLAST of CX298468 vs. ExPASy Swiss-Prot
Match: RL20_YERPS (50S ribosomal protein L20 OS=Yersinia pseudotuberculosis GN=rplT PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.568e-20 Identity = 46/106 (43.40%), Postives = 73/106 (68.87%), Query Frame = -3 Query: 320 RMNKKEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGVNYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDISRNA 637 R K+I K AKG+ G R+A + V KA QY+YRDRR +KR R LWI RINA RQ+G++Y F++GL K +++++RK+L+++++ + +F ALV+ ++ A Sbjct: 11 RARHKKILKQAKGYYGARSRVYRVAFQAVIKAGQYAYRDRRQRKRQFRQLWIARINAAARQNGLSYSRFINGLKKASVEIDRKILADIAVFDKVAFSALVEKAKAA 116
BLAST of CX298468 vs. ExPASy Swiss-Prot
Match: RL20_YERPP (50S ribosomal protein L20 OS=Yersinia pestis (strain Pestoides F) GN=rplT PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.568e-20 Identity = 46/106 (43.40%), Postives = 73/106 (68.87%), Query Frame = -3 Query: 320 RMNKKEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGVNYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDISRNA 637 R K+I K AKG+ G R+A + V KA QY+YRDRR +KR R LWI RINA RQ+G++Y F++GL K +++++RK+L+++++ + +F ALV+ ++ A Sbjct: 11 RARHKKILKQAKGYYGARSRVYRVAFQAVIKAGQYAYRDRRQRKRQFRQLWIARINAAARQNGLSYSRFINGLKKASVEIDRKILADIAVFDKVAFSALVEKAKAA 116
BLAST of CX298468 vs. ExPASy Swiss-Prot
Match: RL20_YERPN (50S ribosomal protein L20 OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=rplT PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.568e-20 Identity = 46/106 (43.40%), Postives = 73/106 (68.87%), Query Frame = -3 Query: 320 RMNKKEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGVNYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDISRNA 637 R K+I K AKG+ G R+A + V KA QY+YRDRR +KR R LWI RINA RQ+G++Y F++GL K +++++RK+L+++++ + +F ALV+ ++ A Sbjct: 11 RARHKKILKQAKGYYGARSRVYRVAFQAVIKAGQYAYRDRRQRKRQFRQLWIARINAAARQNGLSYSRFINGLKKASVEIDRKILADIAVFDKVAFSALVEKAKAA 116
BLAST of CX298468 vs. ExPASy Swiss-Prot
Match: RL20_YERPG (50S ribosomal protein L20 OS=Yersinia pestis bv. Antiqua (strain Angola) GN=rplT PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.568e-20 Identity = 46/106 (43.40%), Postives = 73/106 (68.87%), Query Frame = -3 Query: 320 RMNKKEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGVNYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDISRNA 637 R K+I K AKG+ G R+A + V KA QY+YRDRR +KR R LWI RINA RQ+G++Y F++GL K +++++RK+L+++++ + +F ALV+ ++ A Sbjct: 11 RARHKKILKQAKGYYGARSRVYRVAFQAVIKAGQYAYRDRRQRKRQFRQLWIARINAAARQNGLSYSRFINGLKKASVEIDRKILADIAVFDKVAFSALVEKAKAA 116
BLAST of CX298468 vs. ExPASy Swiss-Prot
Match: RL20_YERPE (50S ribosomal protein L20 OS=Yersinia pestis GN=rplT PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.568e-20 Identity = 46/106 (43.40%), Postives = 73/106 (68.87%), Query Frame = -3 Query: 320 RMNKKEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGVNYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDISRNA 637 R K+I K AKG+ G R+A + V KA QY+YRDRR +KR R LWI RINA RQ+G++Y F++GL K +++++RK+L+++++ + +F ALV+ ++ A Sbjct: 11 RARHKKILKQAKGYYGARSRVYRVAFQAVIKAGQYAYRDRRQRKRQFRQLWIARINAAARQNGLSYSRFINGLKKASVEIDRKILADIAVFDKVAFSALVEKAKAA 116 The following BLAST results are available for this feature:
BLAST of CX298468 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX298468 ID=CX298468; Name=CX298468; organism=Citrus clementina; type=EST; length=714bpback to top |