CX298691

Overview
NameCX298691
Unique NameCX298691
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length658
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX298691 vs. ExPASy Swiss-Prot
Match: TAL_MYCUA (Transaldolase OS=Mycobacterium ulcerans (strain Agy99) GN=tal PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 6.980e-25
Identity = 63/134 (47.01%), Postives = 85/134 (63.43%), Query Frame = 3
Query:    6 AALAYQLYQKKFSGP-RWDALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAV-SRTIDLNVSEAEGIYSALEKLGIDWNYVGTQLELEGVDSFKKSFDSLLDTLQEKANSL 401
            A LAY  YQ+ F G  R+ AL ++GA+ QR LWAST VKNP Y DTLYV  L+ P TV+TMP++ L A  DHG V   +I     +A+ ++  LE +GID + V   LE EGV+ F+ S+  LLD  Q + ++L
Sbjct:  238 ARLAYAAYQEVFEGDARYQALKERGARVQRPLWASTGVKNPDYSDTLYVTELVAPHTVNTMPEKTLDAVADHGVVKGDSITGTSGDAQQVFDKLEAIGIDLSDVFDVLESEGVEKFEASWKELLDATQAQLDAL 371          
BLAST of CX298691 vs. ExPASy Swiss-Prot
Match: TAL_MYCMM (Transaldolase OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=tal PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 6.980e-25
Identity = 63/134 (47.01%), Postives = 85/134 (63.43%), Query Frame = 3
Query:    6 AALAYQLYQKKFSGP-RWDALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAV-SRTIDLNVSEAEGIYSALEKLGIDWNYVGTQLELEGVDSFKKSFDSLLDTLQEKANSL 401
            A LAY  YQ+ F G  R+ AL ++GA+ QR LWAST VKNP Y DTLYV  L+ P TV+TMP++ L A  DHG V   +I     +A+ ++  LE +GID + V   LE EGV+ F+ S+  LLD  Q + ++L
Sbjct:  238 ARLAYAAYQEVFEGDARYQALKERGARVQRPLWASTGVKNPDYSDTLYVTELVAPHTVNTMPEKTLDAVADHGVVKGDSITGTSGDAQQVFDKLEAIGIDLSDVFDVLESEGVEKFEASWKELLDATQAQLDAL 371          
BLAST of CX298691 vs. ExPASy Swiss-Prot
Match: TAL2_STRAW (Transaldolase 2 OS=Streptomyces avermitilis GN=tal2 PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 6.980e-25
Identity = 63/133 (47.37%), Postives = 83/133 (62.41%), Query Frame = 3
Query:    6 AALAYQLYQKKFSGPRWDALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAV-SRTIDLNVSEAEGIYSALEKLGIDWNYVGTQLELEGVDSFKKSFDSLLDTLQEKANSL 401
            A LAY+ Y+  FS  RW AL K  A KQR LWAST VK+PAY DT+YV  L+ P+TV+TMP+  L+A  DHG +   TI     +A     A+EKLGI ++ V   LE EGVD F+ S++ LL + + +   L
Sbjct:  235 ARLAYEAYEAVFSTDRWLALDKAQANKQRPLWASTGVKDPAYKDTMYVEELVAPNTVNTMPEATLEATADHGEIRGNTIAGTYEQARADLDAVEKLGIAYDDVVQLLEEEGVDKFEASWNDLLKSTEAELQRL 367          
BLAST of CX298691 vs. ExPASy Swiss-Prot
Match: TAL_NEIMA (Transaldolase OS=Neisseria meningitidis serogroup A GN=tal PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 9.116e-25
Identity = 56/125 (44.80%), Postives = 81/125 (64.80%), Query Frame = 3
Query:    6 AALAYQLYQKKFSGPRWDALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAVSRTIDLNVSEAEGIYSALEKLGIDWNYVGTQLELEGVDSFKKSFDSLLDTL 380
            A  AYQ +++ F+ P + AL  +GA + +LLWAST VKNPAYPDTLYV  LIG  TV+T+PD  L+AF+DHG    T+     EA+   + +  LGID   +  +L+ +G+  F+++F+ LL  L
Sbjct:  226 AKAAYQDWEQYFTAPEFAALEAQGANRVQLLWASTGVKNPAYPDTLYVDSLIGAHTVNTVPDATLKAFIDHGTAKATLTEGADEAQAQLAEIAALGIDVETLAARLQEDGLKQFEEAFEKLLAPL 350          
BLAST of CX298691 vs. ExPASy Swiss-Prot
Match: TAL2_ANASP (Transaldolase 2 OS=Anabaena sp. (strain PCC 7120) GN=tal2 PE=3 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 9.116e-25
Identity = 60/137 (43.80%), Postives = 85/137 (62.04%), Query Frame = 3
Query:    6 AALAYQLYQKKFSGPRWDALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAVSRTIDLNVSEAEGIYSALE--KLGIDWNYVGTQLELEGVDSFKKSFDSLLDTLQEKANSLKLV 410
            A +AYQ Y+K     +W AL  KGAK QRLLWASTS K+P Y D +YV  LIGPDTV+T+P   + A  DH  V+  ++  V+EA  +  +L+   + ID N V  +L +EG++ F + F SL+++L+ K   L  V
Sbjct:  245 AKIAYQEYKKIIESDQWQALAAKGAKVQRLLWASTSTKDPNYSDVMYVDELIGPDTVNTLPPATITACADHCEVANRVETGVAEAYQLIESLKDPDINIDINAVMDELLIEGINKFVQPFQSLMNSLEGKVKLLSPV 381          
BLAST of CX298691 vs. ExPASy Swiss-Prot
Match: TAL_NEIM0 (Transaldolase OS=Neisseria meningitidis serogroup C (strain 053442) GN=tal PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.555e-24
Identity = 57/125 (45.60%), Postives = 81/125 (64.80%), Query Frame = 3
Query:    6 AALAYQLYQKKFSGPRWDALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAVSRTIDLNVSEAEGIYSALEKLGIDWNYVGTQLELEGVDSFKKSFDSLLDTL 380
            A  AYQ +++ F+ P + AL  +GA + +LLWAST VKNPAYPDTLYV  LIG  TV+T+PD  L+AF+DHG    T+   V EA+   +    LGID   +  +L+ +G+  F+++F+ LL  L
Sbjct:  226 AKAAYQDWEQYFTTPEFAALEAQGANRVQLLWASTGVKNPAYPDTLYVDNLIGAHTVNTVPDATLKAFIDHGTAKATLTEGVEEAQAQLAETAALGIDVETLANRLQEDGLKQFEEAFEKLLAPL 350          
BLAST of CX298691 vs. ExPASy Swiss-Prot
Match: TAL_NEIG1 (Transaldolase OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=tal PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.555e-24
Identity = 56/125 (44.80%), Postives = 81/125 (64.80%), Query Frame = 3
Query:    6 AALAYQLYQKKFSGPRWDALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAVSRTIDLNVSEAEGIYSALEKLGIDWNYVGTQLELEGVDSFKKSFDSLLDTL 380
            A  AYQ +++ F+ P + AL  +GA + +LLWAST VKNPAYPDTLYV  LIG  TV+T+PD  L+AF+DHG    T+  +  EA    + +  LGID   +  +L+ +G+  F+++F+ LL  L
Sbjct:  226 AKAAYQDWEQYFTAPEFAALEAQGANRVQLLWASTGVKNPAYPDTLYVDSLIGVHTVNTVPDATLKAFIDHGTAKATLTESADEARARLAEIAALGIDVETLAARLQEDGLKQFEEAFEKLLAPL 350          
BLAST of CX298691 vs. ExPASy Swiss-Prot
Match: TAL_THEFY (Transaldolase OS=Thermobifida fusca (strain YX) GN=tal PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.031e-24
Identity = 59/129 (45.74%), Postives = 79/129 (61.24%), Query Frame = 3
Query:    6 AALAYQLYQKKFSGPRWDALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAVS-RTIDLNVSEAEGIYSALEKLGIDWNYVGTQLELEGVDSFKKSFDSLLDTLQEK 389
            A LAY  Y++ FS  RW AL + GA+ QR LWAST VK+P  PDTLYV  L+ P TV+TMP   L A  DHG ++  T+  +   A     A+E +G+  + V   LE EGVD F KS++ LLD + ++
Sbjct:  235 ARLAYAAYEEVFSSARWTALAQAGARPQRPLWASTGVKDPELPDTLYVTELVAPGTVNTMPQATLDAVADHGTITGDTVRGHYDAARAHLDAVESVGVSMSDVVETLEDEGVDKFVKSWEELLDRVAQQ 363          
BLAST of CX298691 vs. ExPASy Swiss-Prot
Match: TAL1_STRAW (Transaldolase 1 OS=Streptomyces avermitilis GN=tal1 PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.652e-24
Identity = 59/126 (46.83%), Postives = 81/126 (64.29%), Query Frame = 3
Query:    6 AALAYQLYQKKFSGPRWDALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAV-SRTIDLNVSEAEGIYSALEKLGIDWNYVGTQLELEGVDSFKKSFDSLLDTL 380
            A LAY+ Y++ F+G RW AL   GA KQR LWAST VK+PAY DTLYV  L+ P TV+TMP+  L A  DHG +   T+    ++A    +A+E+LGI ++ V  QLE E V  F+ ++  LL+ +
Sbjct:  241 ARLAYEAYEEVFAGERWTALAPAGAHKQRPLWASTGVKDPAYKDTLYVDELVAPGTVNTMPEGTLNATADHGDIHGDTVTGGYAQARADLAAVERLGISYDEVVKQLEDEAVAKFEVAWGDLLEAV 366          
BLAST of CX298691 vs. ExPASy Swiss-Prot
Match: TAL_NEIG2 (Transaldolase OS=Neisseria gonorrhoeae (strain NCCP11945) GN=tal PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.464e-24
Identity = 56/125 (44.80%), Postives = 81/125 (64.80%), Query Frame = 3
Query:    6 AALAYQLYQKKFSGPRWDALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAVSRTIDLNVSEAEGIYSALEKLGIDWNYVGTQLELEGVDSFKKSFDSLLDTL 380
            A  AYQ +++ F+ P + AL  +GA + +LLWAST VKNPAYPDTLYV  LIG  TV+T+PD  L+AF+DHG    T+  +  EA    + +  LGID   +  +L+ +G+  F+++F+ LL  L
Sbjct:  226 AKAAYQDWEQYFTAPEFAALEAQGANRVQLLWASTGVKNPAYPDTLYVDSLIGVHTVNTVPDATLKAFIDHGTAKATLTESADEALARLAEIAALGIDVETLAARLQEDGLKQFEEAFEKLLAPL 350          
The following BLAST results are available for this feature:
BLAST of CX298691 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
TAL_MYCUA6.980e-2547.01Transaldolase OS=Mycobacterium ulcerans (strain Ag... [more]
TAL_MYCMM6.980e-2547.01Transaldolase OS=Mycobacterium marinum (strain ATC... [more]
TAL2_STRAW6.980e-2547.37Transaldolase 2 OS=Streptomyces avermitilis GN=tal... [more]
TAL_NEIMA9.116e-2544.80Transaldolase OS=Neisseria meningitidis serogroup ... [more]
TAL2_ANASP9.116e-2543.80Transaldolase 2 OS=Anabaena sp. (strain PCC 7120) ... [more]
TAL_NEIM01.555e-2445.60Transaldolase OS=Neisseria meningitidis serogroup ... [more]
TAL_NEIG11.555e-2444.80Transaldolase OS=Neisseria gonorrhoeae (strain ATC... [more]
TAL_THEFY2.031e-2445.74Transaldolase OS=Thermobifida fusca (strain YX) GN... [more]
TAL1_STRAW2.652e-2446.83Transaldolase 1 OS=Streptomyces avermitilis GN=tal... [more]
TAL_NEIG23.464e-2444.80Transaldolase OS=Neisseria gonorrhoeae (strain NCC... [more]

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Properties
Property NameValue
Genbank descriptionC06014E04SK RindPdig24 Citrus clementina cDNA clone C06014E04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX298691 ID=CX298691; Name=CX298691; organism=Citrus clementina; type=EST; length=658bp
GAGGGGCAGCTCTAGCATACCAGCTGTACCAGAAGAAGTTCTCTGGTCCA
AGATGGGACGCTCTTGTGAAGAAAGGTGCAAAGAAGCAGAGACTTCTGTG
GGCCTCAACCAGTGTAAAGAATCCTGCCTACCCTGACACTCTATATGTTG
CTCCTCTCATTGGACCTGATACGGTTTCAACCATGCCAGACCAAGCTCTC
CAAGCATTTGTTGATCATGGTGCAGTTTCAAGAACAATTGACTTGAATGT
TTCTGAGGCTGAAGGCATTTACAGTGCACTGGAGAAGTTGGGAATTGATT
GGAACTACGTTGGCACTCAACTCGAACTTGAAGGGGTAGATTCTTTCAAG
AAGAGCTTTGATAGTCTGCTGGATACCCTGCAAGAGAAGGCAAACTCTCT
CAAGCTGGTTAGTCTGTAAACTGTAATTGTTTTTTTTTTTGCTTAAAACC
CACTTGGCGCAGCTGCGCTGTGCCCTCACCTATGTTTTTGGAGAAATTTT
CACCAAGAATGCAGCGCAGCTGCCCCAATCGGACTCTTATTTTCCGTTGT
GACTGAAATAAATCTAGTGGGTTTTCAATCCCCTTCTCATAATCTGTATG
ACAATAATTATTATGTATGATAAGTGTTTTAGTGCCAAAAAAAAAAAAAA
AAAAAAAA
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