CX298691

Overview
NameCX298691
Unique NameCX298691
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length658
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX298691 vs. ExPASy Swiss-Prot
Match: TAL2_STRCO (Transaldolase 2 OS=Streptomyces coelicolor GN=tal2 PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.524e-24
Identity = 60/133 (45.11%), Postives = 82/133 (61.65%), Query Frame = 3
Query:    6 AALAYQLYQKKFSGPRWDALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAVS-RTIDLNVSEAEGIYSALEKLGIDWNYVGTQLELEGVDSFKKSFDSLLDTLQEKANSL 401
            A LAYQ Y++ F   RW AL K GA KQR LWAST VK+ AY DT+YV  L+ P+TV+TMP+  L A  DHG ++   +  +   A     A+EKLGI ++ V   LE EGVD F+ +++ LL + + +   L
Sbjct:  235 ARLAYQAYEEVFGTDRWAALEKAGANKQRPLWASTGVKDKAYSDTMYVTDLVAPNTVNTMPEATLLATEDHGEITGDAVAGSYERARADLDAIEKLGISYDEVVQLLEKEGVDKFEDAWNDLLKSTEAELKRL 367          
BLAST of CX298691 vs. ExPASy Swiss-Prot
Match: TAL_NEIMF (Transaldolase OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=tal PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 5.909e-24
Identity = 56/125 (44.80%), Postives = 78/125 (62.40%), Query Frame = 3
Query:    6 AALAYQLYQKKFSGPRWDALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAVSRTIDLNVSEAEGIYSALEKLGIDWNYVGTQLELEGVDSFKKSFDSLLDTL 380
            A  AYQ + + F  P + AL  +GA + +LLWAST VKNPAYPDTLYV  LIG  TV+T+PD  L+AF+DHG    T+     EA+   +    LGID   +  +L+ +G+  F+++F+ LL  L
Sbjct:  226 AKAAYQDWAQYFGSPEFAALETQGANRVQLLWASTGVKNPAYPDTLYVDSLIGAHTVNTVPDATLKAFIDHGTAKATLTEGADEAQAQLAETAALGIDVETLAARLQEDGLKQFEEAFEKLLAPL 350          
BLAST of CX298691 vs. ExPASy Swiss-Prot
Match: TAL_SACEN (Transaldolase OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=tal PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.008e-23
Identity = 58/134 (43.28%), Postives = 84/134 (62.69%), Query Frame = 3
Query:    6 AALAYQLYQKKFSGPRWDALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAV-SRTIDLNVSEAEGIYSALEKLGIDWNYVGTQLELEGVDSFKKSFDSLLDTLQEKANSLK 404
            A LAY  Y++ F+  R+ AL  +G K QR LWAST VK+P+Y DT YV  L+ P+TV+TMP+  L A  DH  V    +    +E++ ++ +L   GID + V   LE EGVD F+KS++ LL T++E+ +  K
Sbjct:  233 ARLAYAAYEEVFASDRFKALAAEGGKPQRPLWASTGVKDPSYSDTRYVDELVAPNTVNTMPEATLFASADHADVRGDQVSGKAAESQQVFDSLSAAGIDLDDVFAVLEREGVDKFEKSWEELLQTVREQLDQAK 366          
BLAST of CX298691 vs. ExPASy Swiss-Prot
Match: TAL2_NOSP7 (Transaldolase 2 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=tal2 PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.008e-23
Identity = 59/137 (43.07%), Postives = 85/137 (62.04%), Query Frame = 3
Query:    6 AALAYQLYQKKFSGPRWDALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAVSRTIDLNVSEAEGIYSALE--KLGIDWNYVGTQLELEGVDSFKKSFDSLLDTLQEKANSLKLV 410
            A LAYQ Y+K     RW  LV KGA  QRLLWASTS K+P Y D +Y+  L+GPDTV+T+P   ++A  DH  VS  ++ +V+ A  +   L+   + ID + V  +L +EG+D F + F SL+++L++K   L  V
Sbjct:  245 AKLAYQEYKKIIRSERWQELVAKGATVQRLLWASTSTKDPNYNDVMYIEELVGPDTVNTVPPATIKACADHCNVSDRLETDVNNAYTLIENLKDPDINIDLDTVMDELLVEGIDKFIQPFQSLMNSLEDKIKVLSPV 381          
BLAST of CX298691 vs. ExPASy Swiss-Prot
Match: TAL_THIDA (Transaldolase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=tal PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.719e-23
Identity = 56/122 (45.90%), Postives = 76/122 (62.30%), Query Frame = 3
Query:    6 AALAYQLYQKKFSGPRWDALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAVSRTIDLNVSEAEGIYSALEKLGIDWNYVGTQLELEGVDSFKKSFDSLL 371
            A LAYQ Y + F GP + AL  +GA+ Q LLWAST VKNP Y D LYV PLIG +T++T+PD+ L A  DHG     ++  V EA    +   +LG+D + V  +L+  GV  F+ S+ +LL
Sbjct:  234 AKLAYQAYLETFRGPAFTALAARGARPQFLLWASTGVKNPDYHDLLYVEPLIGRETINTLPDKTLAALRDHGQPVPQLEQAVDEASAQLAEFARLGVDLDAVAARLQDAGVKQFETSYQALL 355          
BLAST of CX298691 vs. ExPASy Swiss-Prot
Match: TAL_MYCLE (Transaldolase OS=Mycobacterium leprae GN=tal PE=3 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 1.719e-23
Identity = 60/134 (44.78%), Postives = 82/134 (61.19%), Query Frame = 3
Query:    6 AALAYQLYQKKFSG-PRWDALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAV-SRTIDLNVSEAEGIYSALEKLGIDWNYVGTQLELEGVDSFKKSFDSLLDTLQEKANSL 401
            A LAY  YQK F G  R+  L+ +GA+ QR LWAST VKNP Y DTLYV  L+ P+TV+TMP+  + A  DHG +   TI      ++ ++ +L  +G+D   V   LE EGV  F KS++ LL   QE+ +S+
Sbjct:  240 ARLAYAAYQKAFEGGQRYQTLMARGAQVQRPLWASTGVKNPDYADTLYVTELVAPNTVNTMPETTIDAVADHGVIRGDTISGTTLSSQKVFDSLVAVGVDLIDVFAVLEHEGVQKFVKSWNELLKETQEQLDSV 373          
BLAST of CX298691 vs. ExPASy Swiss-Prot
Match: TAL_MYCLB (Transaldolase OS=Mycobacterium leprae (strain Br4923) GN=tal PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.719e-23
Identity = 60/134 (44.78%), Postives = 82/134 (61.19%), Query Frame = 3
Query:    6 AALAYQLYQKKFSG-PRWDALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAV-SRTIDLNVSEAEGIYSALEKLGIDWNYVGTQLELEGVDSFKKSFDSLLDTLQEKANSL 401
            A LAY  YQK F G  R+  L+ +GA+ QR LWAST VKNP Y DTLYV  L+ P+TV+TMP+  + A  DHG +   TI      ++ ++ +L  +G+D   V   LE EGV  F KS++ LL   QE+ +S+
Sbjct:  240 ARLAYAAYQKAFEGGQRYQTLMARGAQVQRPLWASTGVKNPDYADTLYVTELVAPNTVNTMPETTIDAVADHGVIRGDTISGTTLSSQKVFDSLVAVGVDLIDVFAVLEHEGVQKFVKSWNELLKETQEQLDSV 373          
BLAST of CX298691 vs. ExPASy Swiss-Prot
Match: TAL_THISH (Transaldolase OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=tal PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.002e-23
Identity = 58/127 (45.67%), Postives = 76/127 (59.84%), Query Frame = 3
Query:    6 AALAYQLYQKKFSGPRWDALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAVSRTIDLNVSEAEGIYSALEKLGIDWNYVGTQLELEGVDSFKKSFDSLLDTLQE 386
            A LAY  ++ +  G R   L   GA  QRLLWAST  KNP Y D LYV  LIG  TV+T+P    +AF+DHG+V+ T+   V  A    +AL  LGID   +  +LE EG+++F+K+F  LL  L E
Sbjct:  241 ARLAYAHFRDQRGGARHTRLTAAGAHPQRLLWASTGTKNPDYSDVLYVDSLIGEHTVNTLPPATYRAFLDHGSVAETLAEGVETARAQVAALADLGIDLESITDRLESEGIEAFQKAFRHLLGVLAE 367          
BLAST of CX298691 vs. ExPASy Swiss-Prot
Match: TAL_KOCRD (Transaldolase OS=Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) GN=tal PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.901e-22
Identity = 53/127 (41.73%), Postives = 77/127 (60.63%), Query Frame = 3
Query:    6 AALAYQLYQKKFSGPRWDALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAVS-RTIDLNVSEAEGIYSALEKLGIDWNYVGTQLELEGVDSFKKSFDSLLDTLQ 383
            A LAYQ+Y++     RW  L   GA  QR LWAST VK+P+ PDTLYV  L+ P+TV+TMP++ L A  DH  V+  T+     ++  +  A+ + G+ +  V  QLE EG+  F  S++ LL T++
Sbjct:  235 ARLAYQVYEQSLDTERWKRLAAAGANPQRPLWASTGVKDPSLPDTLYVTELVAPNTVNTMPEKTLDATFDHAEVTGDTVTGTYEQSAEVLDAIAEQGVSYQEVVAQLETEGLQKFDASWEELLSTVR 361          
BLAST of CX298691 vs. ExPASy Swiss-Prot
Match: TAL1_STRCO (Transaldolase 1 OS=Streptomyces coelicolor GN=tal1 PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.242e-22
Identity = 57/132 (43.18%), Postives = 81/132 (61.36%), Query Frame = 3
Query:    6 AALAYQLYQKKFSGPRWDALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAV-SRTIDLNVSEAEGIYSALEKLGIDWNYVGTQLELEGVDSFKKSFDSLLDTLQEKANS 398
            A LAY+ Y+  F+G R+ AL    A  QR LWAST VK+PA+ DTLYV  L+ P TV+TMP+  L A  DHG V   T+    ++A    +A+E+LG+ ++ V  QLE EGV  F+ ++  LL  + +  +S
Sbjct:  244 ARLAYEAYENVFAGDRFTALAGARANAQRPLWASTGVKDPAFRDTLYVEELVAPGTVNTMPEATLDAAADHGDVRGDTVTGGYAQARADLAAVERLGVSYDEVVEQLEQEGVAKFEAAWQELLAAVTKSLDS 375          
The following BLAST results are available for this feature:
BLAST of CX298691 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
TAL2_STRCO4.524e-2445.11Transaldolase 2 OS=Streptomyces coelicolor GN=tal2... [more]
TAL_NEIMF5.909e-2444.80Transaldolase OS=Neisseria meningitidis serogroup ... [more]
TAL_SACEN1.008e-2343.28Transaldolase OS=Saccharopolyspora erythraea (stra... [more]
TAL2_NOSP71.008e-2343.07Transaldolase 2 OS=Nostoc punctiforme (strain ATCC... [more]
TAL_THIDA1.719e-2345.90Transaldolase OS=Thiobacillus denitrificans (strai... [more]
TAL_MYCLE1.719e-2344.78Transaldolase OS=Mycobacterium leprae GN=tal PE=3 ... [more]
TAL_MYCLB1.719e-2344.78Transaldolase OS=Mycobacterium leprae (strain Br49... [more]
TAL_THISH5.002e-2345.67Transaldolase OS=Thioalkalivibrio sp. (strain HL-E... [more]
TAL_KOCRD1.901e-2241.73Transaldolase OS=Kocuria rhizophila (strain ATCC 9... [more]
TAL1_STRCO3.242e-2243.18Transaldolase 1 OS=Streptomyces coelicolor GN=tal1... [more]

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Properties
Property NameValue
Genbank descriptionC06014E04SK RindPdig24 Citrus clementina cDNA clone C06014E04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX298691 ID=CX298691; Name=CX298691; organism=Citrus clementina; type=EST; length=658bp
GAGGGGCAGCTCTAGCATACCAGCTGTACCAGAAGAAGTTCTCTGGTCCA
AGATGGGACGCTCTTGTGAAGAAAGGTGCAAAGAAGCAGAGACTTCTGTG
GGCCTCAACCAGTGTAAAGAATCCTGCCTACCCTGACACTCTATATGTTG
CTCCTCTCATTGGACCTGATACGGTTTCAACCATGCCAGACCAAGCTCTC
CAAGCATTTGTTGATCATGGTGCAGTTTCAAGAACAATTGACTTGAATGT
TTCTGAGGCTGAAGGCATTTACAGTGCACTGGAGAAGTTGGGAATTGATT
GGAACTACGTTGGCACTCAACTCGAACTTGAAGGGGTAGATTCTTTCAAG
AAGAGCTTTGATAGTCTGCTGGATACCCTGCAAGAGAAGGCAAACTCTCT
CAAGCTGGTTAGTCTGTAAACTGTAATTGTTTTTTTTTTTGCTTAAAACC
CACTTGGCGCAGCTGCGCTGTGCCCTCACCTATGTTTTTGGAGAAATTTT
CACCAAGAATGCAGCGCAGCTGCCCCAATCGGACTCTTATTTTCCGTTGT
GACTGAAATAAATCTAGTGGGTTTTCAATCCCCTTCTCATAATCTGTATG
ACAATAATTATTATGTATGATAAGTGTTTTAGTGCCAAAAAAAAAAAAAA
AAAAAAAA
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