CX299051

Overview
NameCX299051
Unique NameCX299051
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length725
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX299051 vs. ExPASy Swiss-Prot
Match: TRPG2_HALMA (Anthranilate synthase component II OS=Haloarcula marismortui GN=trpG2 PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.675e-17
Identity = 54/125 (43.20%), Postives = 71/125 (56.80%), Query Frame = 2
Query:   17 PLFGVCMGLQCMGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGLLAGLSNPFTAGRYHSLVIEKESFPSDALEVTAWTED--GLIMAARHKKYKHLQGVQFHPESIITTEGKTIVRNFIKMIVR 385
            P  GVC+G Q +  A G  +  +P  V+HGK S V +D      L  G+ +PF  GRYHSL ++    P D L  TA T D  G++M  +H +  H+ GVQFHPESI+T  GK IV NF   I +
Sbjct:   71 PALGVCLGHQALCAAHGTPVGHAP-SVVHGKPSEVRHDGTR---LYDGVDDPFEVGRYHSLAVKASELP-DTLSETAHTNDEQGIVMGVQHAEKPHI-GVQFHPESILTDAGKQIVENFCTGIAK 189          
BLAST of CX299051 vs. ExPASy Swiss-Prot
Match: PABS_STRGR (Para-aminobenzoate synthase OS=Streptomyces griseus GN=pab PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.675e-17
Identity = 53/118 (44.92%), Postives = 72/118 (61.02%), Query Frame = 2
Query:   14 VPLFGVCMGLQCMGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGLLAGLSNPFTAGRYHSLVIEKESFPSDALEVTAWTEDGLIMAARHKKYKHLQGVQFHPESIITTEGKTIVRNF 367
            +P+ GVC+G Q M  A G ++ R+P    HG++S V +D  G   L  GL  P    RYHSL + +   P + LE TAW+EDG++MA RH+    L GVQFHPESI T +G  ++ NF
Sbjct:   76 LPVLGVCLGHQGMALAHGARVGRAP-EPRHGRTSAVRHDGTG---LFEGLPQPLEVVRYHSLAVTE--LPPE-LEATAWSEDGVLMALRHRTLP-LWGVQFHPESIGTQDGHRLLANF 185          
BLAST of CX299051 vs. ExPASy Swiss-Prot
Match: TRPE_AZOBR (Anthranilate synthase OS=Azospirillum brasilense GN=trpE(G) PE=4 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.857e-17
Identity = 54/111 (48.65%), Postives = 69/111 (62.16%), Query Frame = 2
Query:   14 VPLFGVCMGLQCMGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGLLAGLSNPFTAGRYHSLVIEKESFPSDALEVTAWTEDGLIMAARHKKYKHLQGVQFHPESIITTEG 346
            +P+FGVC+GLQ M E FGG +   P  V HGK++ V         L AGL    T GRYHSLV  ++  P+D L VTA T DGL+MA  H++   L  VQFHPESI++ +G
Sbjct:  604 LPVFGVCLGLQGMVERFGGALDVLPEPV-HGKATEV---RVLGGALFAGLPERLTVGRYHSLVARRDRLPAD-LTVTAETADGLVMAVEHRRLP-LAAVQFHPESILSLDG 708          
BLAST of CX299051 vs. ExPASy Swiss-Prot
Match: TRPG_ASPNG (Anthranilate synthase component 2 OS=Aspergillus niger GN=trpC PE=4 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.731e-17
Identity = 53/127 (41.73%), Postives = 75/127 (59.06%), Query Frame = 2
Query:   14 VPLFGVCMGLQCMGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGLLAGLSNPFTAGRYHSLVIEKESFPSDALEVTAWTE------DGLIMAARHKKYKHLQGVQFHPESIITTEGKTIVRNFIKM 376
            +P+FGVCMG QC+   FGGK+  +   ++HGK+S + +D KG      GL       RYHSL     + P D LEV++  +        +IM  RHKK   ++GVQFHPESI+T  G+ + RNF+K+
Sbjct:   98 IPIFGVCMGQQCIITCFGGKVDVTG-EILHGKTSPLKHDGKGA---YEGLPGSLAVTRYHSLAGTHATIP-DCLEVSSSVQLADDSNKDVIMGVRHKKLA-VEGVQFHPESILTEYGRIMFRNFLKL 218          
BLAST of CX299051 vs. ExPASy Swiss-Prot
Match: TRPG_PHACH (Anthranilate synthase component 2 OS=Phanerochaete chrysosporium GN=TRPC PE=4 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.365e-17
Identity = 51/122 (41.80%), Postives = 77/122 (63.11%), Query Frame = 2
Query:   14 VPLFGVCMGLQCMGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGLLAGLSNPFTAGRYHSLVIEKESFPSDALEVTAWTE-DGLIMAARHKKYKHLQGVQFHPESIITTEGKTIVRNFIKM 376
            VP+ GVCMGL+C+ + FGG+I  +   +MHGK S + +D +G       L     + RYHSL    ++ P D L VTA TE + +IM  RH+KY  ++ VQ+HPESI++  G  ++R+F+K+
Sbjct:   85 VPIMGVCMGLECVVDVFGGQIAYAG-EIMHGKVSGIRHDARG---CFKDLPQGIQSTRYHSLSAGVKTLP-DELAVTAVTEHERVIMGIRHRKYT-VEAVQYHPESILSESGDDLLRHFMKL 200          
BLAST of CX299051 vs. ExPASy Swiss-Prot
Match: TRPG_METTM (Anthranilate synthase component II OS=Methanobacterium thermoautotrophicum (strain Marburg / DSM 2133) GN=trpG PE=4 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.365e-17
Identity = 54/120 (45.00%), Postives = 72/120 (60.00%), Query Frame = 2
Query:   17 PLFGVCMGLQCMGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGLLAGLSNPFTAGRYHSLVIEKESFPSDALEVTAWTEDGLIMAARHKKYKHLQGVQFHPESIITTEGKTIVRNFIKM 376
            P+ GVC+G Q +   FGG +       +HGK S V++D  G + L  G+ NPF A RYHSL  E    P D L V+A   DG IMA RH++Y  + G+QFHPES  T  G+ I+ NF++M
Sbjct:   84 PILGVCLGHQGIFHYFGGVVGYGE--PVHGKISEVFHD--GSE-LFRGVPNPFRATRYHSLRCECSGVPEDIL-VSASAPDGTIMAIRHRQYP-VYGLQFHPESAGTPHGRDILENFLRM 196          
BLAST of CX299051 vs. ExPASy Swiss-Prot
Match: TRPG_HALVO (Anthranilate synthase component II OS=Halobacterium volcanii GN=trpG PE=4 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.365e-17
Identity = 53/135 (39.26%), Postives = 78/135 (57.78%), Query Frame = 2
Query:    2 LGPTVPLFGVCMGLQCMGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGLLAGLSNPFTAGRYHSLVIEKESFPSDALEVTAWTE---DGLIMAARHKKYKHLQGVQFHPESIITTEGKTIVRNFIKMIVRKEAA 397
            L   +P  GVC+GL+    A+GG I  +P   +HGK+  V +D  G   + AGL + F AGRYHSLV    +   D  +V+A T+   + L+M  RH+ Y  ++ VQFHPES++T  G  +VRNF+  +   + A
Sbjct:   78 LSTEIPTLGVCLGLEAAVYAYGGTIGHAP-DAIHGKAFPVDHDGAG---VFAGLEDGFPAGRYHSLV---ATDVPDCFDVSATTDHDGEALVMGVRHRDYP-IECVQFHPESVLTGSGHGVVRNFLTAVAGFDVA 204          
BLAST of CX299051 vs. ExPASy Swiss-Prot
Match: TRPG_CRYNE (Anthranilate synthase component 2 OS=Cryptococcus neoformans GN=TRP1 PE=4 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.086e-16
Identity = 50/122 (40.98%), Postives = 78/122 (63.93%), Query Frame = 2
Query:   14 VPLFGVCMGLQCMGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGLLAGLSNPFTAGRYHSLVIEKESFPSDALEVTAWT-EDGLIMAARHKKYKHLQGVQFHPESIITTEGKTIVRNFIKM 376
            +P+ GVCMGL+C+ +  GG+I  +   + HGK+SLV +D  G   +   L    ++ RYHSL  + +S PS  L+VT+ T E G+IM  RH+ Y  ++ VQ+HPES ++  G+ ++ NFI+M
Sbjct:   80 LPILGVCMGLECIVDLLGGEIAYAG-EIKHGKTSLVQHDSIG---VFHNLPQFLSSTRYHSLSAQIQSLPS-VLQVTSTTKESGVIMGVRHRTYT-VEAVQYHPESCMSEGGRGLMANFIQM 195          
BLAST of CX299051 vs. ExPASy Swiss-Prot
Match: TRPG_SULSO (Anthranilate synthase component II OS=Sulfolobus solfataricus GN=trpG PE=1 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 1.852e-16
Identity = 52/126 (41.27%), Postives = 71/126 (56.35%), Query Frame = 2
Query:    2 LGPTVPLFGVCMGLQCMGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGLLAGLSNPFTAGRYHSLVIEKESFPSDALEVTAWTEDGLIMAARHKKYKHLQGVQFHPESIITTEGKTIVRNFIKMI 379
            LG   P+ GVC+G Q +G AFG KI R    V HGK S +         L  G++  F A RYHSLV+++   P     ++A  ED  IMA  H++Y  + GVQFHPES+ T+ G  I+ NF+  +
Sbjct:   74 LGKRTPILGVCLGHQAIGYAFGAKI-RRARKVFHGKISNIILVNNSPLSLYYGIAKEFKATRYHSLVVDEVHRPLIVDAISA--EDNEIMAIHHEEYP-IYGVQFHPESVGTSLGYKILYNFLNRV 195          
BLAST of CX299051 vs. ExPASy Swiss-Prot
Match: TRPG_CRYNV (Anthranilate synthase component 2 OS=Cryptococcus neoformans var. grubii GN=TRP1 PE=4 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 3.159e-16
Identity = 49/122 (40.16%), Postives = 78/122 (63.93%), Query Frame = 2
Query:   14 VPLFGVCMGLQCMGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGLLAGLSNPFTAGRYHSLVIEKESFPSDALEVTAWT-EDGLIMAARHKKYKHLQGVQFHPESIITTEGKTIVRNFIKM 376
            +P+ GVCMGL+C+ +  GG+I  +   + HGK+SLV +D  G   +   L    ++ RYHSL  + +S PS  L+VT+ T E G+IM  RH+ +  ++ VQ+HPES ++  G+ ++ NFI+M
Sbjct:   80 LPILGVCMGLECIVDLLGGEIAYAG-EIKHGKTSLVQHDSIG---VFHNLPQFLSSTRYHSLSAQIQSLPS-VLQVTSTTKESGVIMGVRHRTFT-VEAVQYHPESCMSEGGRGLMANFIQM 195          
The following BLAST results are available for this feature:
BLAST of CX299051 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
TRPG2_HALMA1.675e-1743.20Anthranilate synthase component II OS=Haloarcula m... [more]
PABS_STRGR1.675e-1744.92Para-aminobenzoate synthase OS=Streptomyces griseu... [more]
TRPE_AZOBR2.857e-1748.65Anthranilate synthase OS=Azospirillum brasilense G... [more]
TRPG_ASPNG3.731e-1741.73Anthranilate synthase component 2 OS=Aspergillus n... [more]
TRPG_PHACH6.365e-1741.80Anthranilate synthase component 2 OS=Phanerochaete... [more]
TRPG_METTM6.365e-1745.00Anthranilate synthase component II OS=Methanobacte... [more]
TRPG_HALVO6.365e-1739.26Anthranilate synthase component II OS=Halobacteriu... [more]
TRPG_CRYNE1.086e-1640.98Anthranilate synthase component 2 OS=Cryptococcus ... [more]
TRPG_SULSO1.852e-1641.27Anthranilate synthase component II OS=Sulfolobus s... [more]
TRPG_CRYNV3.159e-1640.16Anthranilate synthase component 2 OS=Cryptococcus ... [more]

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Properties
Property NameValue
Genbank descriptionC06018D03SK RindPdig24 Citrus clementina cDNA clone C06018D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX299051 ID=CX299051; Name=CX299051; organism=Citrus clementina; type=EST; length=725bp
ACTTGGACCTACTGTGCCTCTGTTTGGCGTTTGTATGGGTTTGCAGTGCA
TGGGAGAGGCTTTTGGAGGGAAGATTGTGCGTTCTCCTCTTGGTGTCATG
CATGGAAAAAGTTCTCTTGTGTATTATGATGAGAAAGGGGAGGATGGCTT
GCTTGCTGGACTATCAAATCCTTTCACAGCAGGTAGATATCATAGCCTTG
TGATTGAGAAAGAAAGCTTTCCTAGTGATGCGCTGGAAGTTACAGCATGG
ACAGAAGATGGGCTGATAATGGCTGCTCGTCACAAGAAATATAAGCATCT
GCAGGGGGTTCAATTTCATCCGGAGAGCATTATAACCACCGAGGGCAAGA
CAATTGTTCGCAATTTCATCAAAATGATAGTGAGAAAGGAAGCGGCTGAT
TCTCAGAATTAGACTATCAGCCATGTGGCAATATTTCATCAATCAAGCAT
ACCTCATTATTCTAGCAAAAGTTACTGATGCAGTGATTTTCTTTTCCTTA
CAAGATTCAGTACAAAAGTTTGTGGTCCTTGTCTATTAATATGTAGTGTC
TTTGACTCTTGAGAATTTGTTGCAATCTATGTTGGCTTCTCTTGGGGAGA
GGATTTGTATTCAAGGGGATGTTTGGGGTTGCATTAGATTCGTAAATGAT
TTGTTCTTAGATTAGATTTTGAAACATCAGCTTTGAAAAATATTTGATAA
GATGAATGTTTTATAATACTAATCC
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