CX299658
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299658 vs. ExPASy Swiss-Prot
Match: MENE_STAAC (2-succinylbenzoate--CoA ligase OS=Staphylococcus aureus (strain COL) GN=menE PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.180e-16 Identity = 51/150 (34.00%), Postives = 82/150 (54.67%), Query Frame = 3 Query: 45 GEIVMSGNVVMKGYLKNPKANEETFANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKLCRAKMPAYWVPKSIVFGPLPKTATGKIQKHVL 494 GE+++ G VM YL P TF NG+++TGD+ + Y+ I DR KD+IISGGENI ++E + P + +A V D+ WG+ P + + ++ K+ Q +A L + K+P ++ LP T+TGK+Q++ L Sbjct: 347 GELMIKGANVMNVYLY-PTDLTGTFENGYFNTGDIAEIDHEGYVMIYDRRKDLIISGGENIYPYQIETVAKQFPGISDAVCVGHPDDTWGQVPKLYFVSESDISKA--QLIAYLSQHLAKYKVPKHFEK----VDTLPYTSTGKLQRNKL 489
BLAST of CX299658 vs. ExPASy Swiss-Prot
Match: MENE_STAA8 (2-succinylbenzoate--CoA ligase OS=Staphylococcus aureus (strain NCTC 8325) GN=menE PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.180e-16 Identity = 51/150 (34.00%), Postives = 82/150 (54.67%), Query Frame = 3 Query: 45 GEIVMSGNVVMKGYLKNPKANEETFANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKLCRAKMPAYWVPKSIVFGPLPKTATGKIQKHVL 494 GE+++ G VM YL P TF NG+++TGD+ + Y+ I DR KD+IISGGENI ++E + P + +A V D+ WG+ P + + ++ K+ Q +A L + K+P ++ LP T+TGK+Q++ L Sbjct: 347 GELMIKGANVMNVYLY-PTDLTGTFENGYFNTGDIAEIDHEGYVMIYDRRKDLIISGGENIYPYQIETVAKQFPGISDAVCVGHPDDTWGQVPKLYFVSESDISKA--QLIAYLSQHLAKYKVPKHFEK----VDTLPYTSTGKLQRNKL 489
BLAST of CX299658 vs. ExPASy Swiss-Prot
Match: MENE_STAA3 (2-succinylbenzoate--CoA ligase OS=Staphylococcus aureus (strain USA300) GN=menE PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.180e-16 Identity = 51/150 (34.00%), Postives = 82/150 (54.67%), Query Frame = 3 Query: 45 GEIVMSGNVVMKGYLKNPKANEETFANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKLCRAKMPAYWVPKSIVFGPLPKTATGKIQKHVL 494 GE+++ G VM YL P TF NG+++TGD+ + Y+ I DR KD+IISGGENI ++E + P + +A V D+ WG+ P + + ++ K+ Q +A L + K+P ++ LP T+TGK+Q++ L Sbjct: 347 GELMIKGANVMNVYLY-PTDLTGTFENGYFNTGDIAEIDHEGYVMIYDRRKDLIISGGENIYPYQIETVAKQFPGISDAVCVGHPDDTWGQVPKLYFVSESDISKA--QLIAYLSQHLAKYKVPKHFEK----VDTLPYTSTGKLQRNKL 489
BLAST of CX299658 vs. ExPASy Swiss-Prot
Match: CAIC_ECO7I (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=caiC PE=3 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 2.180e-16 Identity = 56/166 (33.73%), Postives = 83/166 (50.00%), Query Frame = 3 Query: 15 QPVPADGKTIGEIVMSG---NVVMKGYLKNPKANEETF-ANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKLCRAKMPAYWVPKSI-VFGPLPKTATGKIQKHVLR 497 +P+PA IGEI + G + K Y NPKA + A+GW HTGD G + + + DR ++I GGEN+S VE+EN++ HP + + VV D E+ AFV L E E+ + C M + VP + + LP+ +GKI + L+ Sbjct: 359 RPLPAG--EIGEICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYRDEEGFFYFADRRCNMIKRGGENVSCVELENIIAAHPKIQDIVVVGIKDSIRDEAIKAFVVL-----NEGETLSEEEFFRFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK 517
BLAST of CX299658 vs. ExPASy Swiss-Prot
Match: CAIC_SHIFL (Probable crotonobetaine/carnitine-CoA ligase OS=Shigella flexneri GN=caiC PE=3 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 2.847e-16 Identity = 56/166 (33.73%), Postives = 83/166 (50.00%), Query Frame = 3 Query: 15 QPVPADGKTIGEIVMSG---NVVMKGYLKNPKANEETF-ANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKLCRAKMPAYWVPKSI-VFGPLPKTATGKIQKHVLR 497 +P+PA IGEI + G + K Y NPKA + A+GW HTGD G + + + DR ++I GGEN+S VE+EN++ HP + + VV D E+ AFV L E E+ + C M + VP + + LP+ +GKI + L+ Sbjct: 359 RPLPAG--EIGEICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYRDEEGFFYFVDRRCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVL-----NEGETLSEEEFFRFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK 517
BLAST of CX299658 vs. ExPASy Swiss-Prot
Match: CAIC_ECOSM (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=caiC PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.847e-16 Identity = 56/166 (33.73%), Postives = 83/166 (50.00%), Query Frame = 3 Query: 15 QPVPADGKTIGEIVMSG---NVVMKGYLKNPKANEETF-ANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKLCRAKMPAYWVPKSI-VFGPLPKTATGKIQKHVLR 497 +P+PA IGEI + G + K Y NPKA + A+GW HTGD G + + + DR ++I GGEN+S VE+EN++ HP + + VV D E+ AFV L E E+ + C M + VP + + LP+ +GKI + L+ Sbjct: 359 RPLPAG--EIGEICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYRDEEGFFYFVDRRCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVL-----NEGETLSEEEFFRFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK 517
BLAST of CX299658 vs. ExPASy Swiss-Prot
Match: MENE_STAES (2-succinylbenzoate--CoA ligase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=menE PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.719e-16 Identity = 56/166 (33.73%), Postives = 91/166 (54.82%), Query Frame = 3 Query: 45 GEIVMSGNVVMKGYLKNPKANEETFAN-GWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMK-LCRAKMP-AYWVPKSIVFGPLPKTATGKIQKHVLRAKAKEMGPVRKS 533 GE+++ G VM GYL PK ++TF N G++ TGD+ + Y+ I DR KD+IISGGENI ++E + + +A V +D+ WG+ P + ++ N+ +L E L R K+P Y+ +S LP T+TGK+Q+ ++++ G +S Sbjct: 318 GELLIKGENVMNGYLY-PKYLKDTFDNDGYFQTGDIAEIDDEGYVIIYDRRKDLIISGGENIYPYQIETIAKDFEGIEDAVCVGISDDTWGQVPILYYVTNQDI---NQNELIEHFENHLARYKIPKKYYQVES-----LPYTSTGKLQRKKVKSEDLNEGKNNES 474
BLAST of CX299658 vs. ExPASy Swiss-Prot
Match: CAIC_SHIDS (Probable crotonobetaine/carnitine-CoA ligase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=caiC PE=3 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 3.719e-16 Identity = 56/166 (33.73%), Postives = 83/166 (50.00%), Query Frame = 3 Query: 15 QPVPADGKTIGEIVMSG---NVVMKGYLKNPKANEETF-ANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKLCRAKMPAYWVPKSI-VFGPLPKTATGKIQKHVLR 497 +P+PA IGEI + G + K Y NPKA + A+GW HTGD G + + + DR ++I GGEN+S VE+EN++ HP + + VV D E+ AFV L E E+ + C M + VP + + LP+ +GKI + L+ Sbjct: 359 RPLPAG--EIGEICIKGVLGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYRDEEGFFYFVDRRCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVL-----NEGETLSEEEFFRFCEQNMAKFKVPSYLEIRKVLPRNCSGKIIRKNLK 517
BLAST of CX299658 vs. ExPASy Swiss-Prot
Match: CAIC_ECO5E (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=caiC PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.719e-16 Identity = 56/166 (33.73%), Postives = 83/166 (50.00%), Query Frame = 3 Query: 15 QPVPADGKTIGEIVMSG---NVVMKGYLKNPKANEETF-ANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKLCRAKMPAYWVPKSI-VFGPLPKTATGKIQKHVLR 497 +P+PA IGEI + G + K Y NPKA + A+GW HTGD G + + + DR ++I GGEN+S VE+EN++ HP + + VV D E+ AFV L E E+ + C M + VP + + LP+ +GKI + L+ Sbjct: 359 RPLPAG--EIGEICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYRDEEGFFYFIDRRCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVL-----NEGETLSEEEFFRFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK 517
BLAST of CX299658 vs. ExPASy Swiss-Prot
Match: CAIC_ECO57 (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli O157:H7 GN=caiC PE=3 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 3.719e-16 Identity = 56/166 (33.73%), Postives = 83/166 (50.00%), Query Frame = 3 Query: 15 QPVPADGKTIGEIVMSG---NVVMKGYLKNPKANEETF-ANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKLCRAKMPAYWVPKSI-VFGPLPKTATGKIQKHVLR 497 +P+PA IGEI + G + K Y NPKA + A+GW HTGD G + + + DR ++I GGEN+S VE+EN++ HP + + VV D E+ AFV L E E+ + C M + VP + + LP+ +GKI + L+ Sbjct: 359 RPLPAG--EIGEICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYRDEEGFFYFIDRRCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVL-----NEGETLSEEEFFRFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK 517 The following BLAST results are available for this feature:
BLAST of CX299658 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 249
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299658 ID=CX299658; Name=CX299658; organism=Citrus clementina; type=EST; length=683bpback to top |