CX299658
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX299658 vs. ExPASy Swiss-Prot
Match: LCFA_ECO57 (Long-chain-fatty-acid--CoA ligase OS=Escherichia coli O157:H7 GN=fadD PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.489e-20 Identity = 55/156 (35.26%), Postives = 82/156 (52.56%), Query Frame = 3 Query: 45 GEIVMSGNVVMKGYLKNPKANEETFANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKLCRAKMPAYWVPKSIVF-GPLPKTATGKIQKHVLRAKAK 509 GE+ + G VM GY + P A +E NGW HTGD+ V + ++ I DR KD+I+ G N+ E+E+++ HP V E + V GE+ FV K + E ++ CR ++ Y VPK + F LPK+ GKI + LR +A+ Sbjct: 405 GELCVRGPQVMLGYWQRPDATDEIIKNGWLHTGDIAVMDEEGFLRIVDRKKDMILVSGFNVYPNEIEDVVMQHPGVQEVAAVGVPSGSSGEAVKIFVV------KKDPSLTEESLVTFCRRQLTGYKVPKLVEFRDELPKSNVGKILRRELRDEAR 554
BLAST of CX299658 vs. ExPASy Swiss-Prot
Match: VIBE_VIBCH (Vibriobactin-specific 2,3-dihydroxybenzoate-AMP ligase OS=Vibrio cholerae GN=vibE PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.241e-20 Identity = 66/170 (38.82%), Postives = 95/170 (55.88%), Query Frame = 3 Query: 15 QPVPADGKTIGEIVMSGNVVMKGYLKNPKANEETF-ANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKLCRAKMPAYWVPKSIVF-GPLPKTATGKIQKHVLRAKAKEMG 518 QPV A G+ G ++ G ++GY + + N+ F A G+Y TGD + Y+ + R+KD I GGE I++ EVEN + HPAV +A+++A +DE GE CA + LKPE N QL L +A + Y +P I F LPKT+ GKI K+ LR + +G Sbjct: 375 QPV-ASGEE-GYLLTQGPYTIRGYYRADQHNQRAFNAQGFYITGDKVKLSSEGYVIVTGRAKDQINRGGEKIAAEEVENQLLHHPAVHDAALIAISDEYLGERSCAVIVLKPE-QSVNTIQLKR---FLHQAGLADYKIPDQIQFIDQLPKTSVGKIDKNALRRRFDTLG 538
BLAST of CX299658 vs. ExPASy Swiss-Prot
Match: FAT2_YEAST (Peroxisomal-coenzyme A synthetase OS=Saccharomyces cerevisiae GN=FAT2 PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.241e-20 Identity = 57/169 (33.73%), Postives = 91/169 (53.85%), Query Frame = 3 Query: 42 IGEIVMSGNVVMKGYLKNPKANEETFAN--GWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKLCRAKMPAYWVPKSIVF-GPLPKTATGKIQKHVLRAKAKEMGPVRKSKL 539 +GE+ + G V GY NPKAN+E F ++ TGD G P+ ++ + R K++I GGE IS +E++ +M HP + EA D+ +G+ A + L K E+ E+++ + + ++ +P + F LPKTATGKIQ+ V+ A+ KSKL Sbjct: 381 VGEVSIRGENVTLGYANNPKANKENFTKRENYFRTGDQGYFDPEGFLVLTGRIKELINRGGEKISPIELDGIMLSHPKIDEAVAFGVPDDMYGQVVQAAIVL-----KKGEKMTYEELVNFLKKHLASFKIPTKVYFVDKLPKTATGKIQRRVI-AETFAKSSRNKSKL 543
BLAST of CX299658 vs. ExPASy Swiss-Prot
Match: ACSM2_MOUSE (Acyl-coenzyme A synthetase ACSM2, mitochondrial OS=Mus musculus GN=Acsm2 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 9.457e-20 Identity = 55/145 (37.93%), Postives = 77/145 (53.10%), Query Frame = 3 Query: 72 VMKGYLKNPKANEETFANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKLCRAKMPAYWVPKSIVFG-PLPKTATGKIQKHVLRAK 503 + GY+ NPK ++ ++ GD G+K P+ Y RS DII S G I EVEN + HPAV E +V++ D GE AFV L PE + QL + + + ++ Y P+ + F LPKT TGKI++ LRAK Sbjct: 423 MFSGYVDNPKKTQDNIRGDFWLMGDRGIKDPEGYFHFIGRSDDIINSSGYRIGPSEVENALMEHPAVSETAVISSPDPSRGEVVKAFVVLAPEFLSHDRDQLTKVLQEHVKSVTAPYKYPRKVEFVLDLPKTVTGKIERAKLRAK 567
BLAST of CX299658 vs. ExPASy Swiss-Prot
Match: 4CL5_ORYSJ (Probable 4-coumarate--CoA ligase 5 OS=Oryza sativa subsp. japonica GN=4CL5 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.235e-19 Identity = 59/156 (37.82%), Postives = 86/156 (55.13%), Query Frame = 3 Query: 45 GEIVMSGNVVMKGYLKNPKANEETF-ANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKLCRAKMPAYW--VPKSIVFGPLPKTATGKIQKHVLRAK 503 GEI + G +MKGYL NP+A E+T +GW HTGD+G D+ I I DR K++I G ++ E+E M+ H AV +A+VV D+ GE P AFV + + + +D +K AK ++ + K +PK +GKI + LRAK Sbjct: 382 GEICIRGKQIMKGYLNNPEATEKTIDKDGWLHTGDIGFVDDDDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHAAVADAAVVPMKDDSCGEIPVAFVVAR------DGSGITDDEIKQYVAKQVVFYKRLHKIFFVDAIPKAPSGKILRKDLRAK 531
BLAST of CX299658 vs. ExPASy Swiss-Prot
Match: 4CL4_ARATH (4-coumarate--CoA ligase 4 OS=Arabidopsis thaliana GN=4CL4 PE=1 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.613e-19 Identity = 61/160 (38.12%), Postives = 89/160 (55.62%), Query Frame = 3 Query: 45 GEIVMSGNVVMKGYLKNPKANEETF-ANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKLCRAKMPAYWVPKSIVF--GPLPKTATGKIQKHVLRAKAKEM 515 GEI + G+ +MKGYL +P+A T +GW HTGD+G D+ I I DR K++I G ++ E+E ++ HP++ +A+VVA DE E P AFV +S QL ED +K K ++ +VF +PK +GKI + LRAK + M Sbjct: 414 GEICVRGHQLMKGYLNDPEATARTIDKDGWLHTGDIGFVDDDDEIFIVDRLKELIKFKGYQVAPAELEALLISHPSIDDAAVVAMKDEVADEVPVAFVA------RSQGSQLTEDDVKSYVNKQVVHYKRIKMVFFIEVIPKAVSGKILRKDLRAKLETM 567
BLAST of CX299658 vs. ExPASy Swiss-Prot
Match: 4CL1_ORYSJ (Probable 4-coumarate--CoA ligase 1 OS=Oryza sativa subsp. japonica GN=4CL1 PE=2 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 1.613e-19 Identity = 64/173 (36.99%), Postives = 94/173 (54.34%), Query Frame = 3 Query: 24 PADGKTIG-----EIVMSGNVVMKGYLKNPKANEETF-ANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADE-RWGESPCAFVTLKPEVDKSNEQQLAEDIMKLCRAKMPAYWVPKSIVF--GPLPKTATGKIQKHVLRAKAKEM 515 P GK++G EI + G +MKGYL NP+A + T A GW HTGD+G D+ I I DR K+II G ++ E+E ++ HP++ +A+VV + E GE P AFV K+ +L+ED +K AK Y+ VF +PK +GKI + LR + + + Sbjct: 394 PDTGKSLGRNLPGEICIRGQQIMKGYLNNPEATKNTIDAEGWLHTGDIGYVDDDDEIFIVDRLKEIIKYRGFQVAPAELEALLITHPSIADAAVVGKQIEPEIGEIPVAFVA------KTEGSELSEDDVKQFVAKEVIYYKKIREVFFVDKIPKAPSGKILRKELRKQLQHL 560
BLAST of CX299658 vs. ExPASy Swiss-Prot
Match: 4CL_VANPL (4-coumarate--CoA ligase OS=Vanilla planifolia GN=4CL PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.751e-19 Identity = 58/156 (37.18%), Postives = 86/156 (55.13%), Query Frame = 3 Query: 45 GEIVMSGNVVMKGYLKNPKANEETF-ANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKLCRAKMPAYWVPKSIVF--GPLPKTATGKIQKHVLRAK 503 GEI + G+ +MKGYL +P+A T GW HTGD+G D+ + I DR K++I G ++ E+E ++ HP + +A+VV DE GE P AFV KSN + ED +K +K ++ + VF +PK +GKI + LRA+ Sbjct: 395 GEICIRGDQIMKGYLNDPEATARTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLLTHPCISDAAVVPMKDEAAGEVPVAFVV------KSNGHNITEDEIKQFISKQVIFYKRINRVFFVEAIPKAPSGKILRKDLRAR 544
BLAST of CX299658 vs. ExPASy Swiss-Prot
Match: LCFA_YERPE (Long-chain-fatty-acid--CoA ligase OS=Yersinia pestis GN=fadD PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.593e-19 Identity = 54/159 (33.96%), Postives = 86/159 (54.09%), Query Frame = 3 Query: 45 GEIVMSGNVVMKGYLKNPKANEETFANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKLCRAKMPAYWVPKSIVF-GPLPKTATGKIQKHVLRAKAKEMG 518 GE+ + G VM GY + P A ++ +GW TGD+ D ++ I DR KD+I+ G N+ E+E ++ LH VLE++V+ +E GE+ FV K++ E+++ CR + Y VPK + F LPK+ GKI + LR + ++G Sbjct: 405 GELWVRGPQVMLGYWQRPDATDDVLKDGWLATGDIATMDEDGFLRIVDRKKDMILVSGFNVYPNEIEEVVALHAKVLESAVIGVPNEVSGEAVKVFVV------KNDASLTPEELLTHCRRYLTGYKVPKIVEFRDELPKSNVGKILRRELRDEEVKVG 557
BLAST of CX299658 vs. ExPASy Swiss-Prot
Match: 4CLL1_ORYSJ (4-coumarate--CoA ligase-like 1 OS=Oryza sativa subsp. japonica GN=4CLL1 PE=2 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 4.693e-19 Identity = 61/168 (36.31%), Postives = 88/168 (52.38%), Query Frame = 3 Query: 42 IGEIVMSGNVVMKGYLKNPKANEETFANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAE-DIMKLCRAKMPAYWVPKSIVF-GPLPKTATGKIQKHVLRAKAKEMGPVRKSKL 539 +GEI + G VM+GY N +A E T GW HTGDLG + + DR K++I G I+ E+E ++ HP +L+A V+ D + GE P A+V P + L E D+ K ++ Y K + F G +PK+A+GKI + L A+ VR SKL Sbjct: 397 VGEICVRGPNVMQGYFNNVQATEFTIKQGWLHTGDLGYFDGGGQLFVVDRLKELIKYKGFQIAPAELEGLLLSHPEILDAVVIPFPDAKAGEVPIAYVVRSP------DSSLTEVDVQKFIEKQVAYYKRLKRVTFVGSVPKSASGKILRRQLIAQ------VRSSKL 552 The following BLAST results are available for this feature:
BLAST of CX299658 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 249
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299658 ID=CX299658; Name=CX299658; organism=Citrus clementina; type=EST; length=683bpback to top |