CX299658
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX299658 vs. ExPASy Swiss-Prot
Match: LCFA_SALTY (Long-chain-fatty-acid--CoA ligase OS=Salmonella typhimurium GN=fadD PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.005e-19 Identity = 55/157 (35.03%), Postives = 82/157 (52.23%), Query Frame = 3 Query: 45 GEIVMSGNVVMKGYLKNPKANEETFANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAED-IMKLCRAKMPAYWVPKSIVF-GPLPKTATGKIQKHVLRAKAK 509 GE+ + G VM GY + P A +E +GW HTGD+ V D ++ I DR KD+I+ G N+ E+E+++ H V E + V GE+ FV K + L +D ++ CR + Y VPK + F LPK+ GKI + LR +A+ Sbjct: 405 GELCVKGPQVMLGYWQRPDATDEIIKDGWLHTGDIAVMDEDGFLRIVDRKKDMILVSGFNVYPNEIEDVVMQHSGVQEVAAVGVPSGSSGEAVKLFVVKK-------DPALTDDALITFCRRHLTGYKVPKQVEFREELPKSNVGKILRRELRDEAR 554
BLAST of CX299658 vs. ExPASy Swiss-Prot
Match: LCFA_SALTI (Long-chain-fatty-acid--CoA ligase OS=Salmonella typhi GN=fadD PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.005e-19 Identity = 55/157 (35.03%), Postives = 82/157 (52.23%), Query Frame = 3 Query: 45 GEIVMSGNVVMKGYLKNPKANEETFANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAED-IMKLCRAKMPAYWVPKSIVF-GPLPKTATGKIQKHVLRAKAK 509 GE+ + G VM GY + P A +E +GW HTGD+ V D ++ I DR KD+I+ G N+ E+E+++ H V E + V GE+ FV K + L +D ++ CR + Y VPK + F LPK+ GKI + LR +A+ Sbjct: 405 GELCVKGPQVMLGYWQRPDATDEIIKDGWLHTGDIAVMDEDGFLRIVDRKKDMILVSGFNVYPNEIEDVVMQHSGVQEVAAVGVPSGSSGEAVKLFVVKK-------DPALTDDALITFCRRHLTGYKVPKQVEFREELPKSNVGKILRRELRDEAR 554
BLAST of CX299658 vs. ExPASy Swiss-Prot
Match: ACSM4_RAT (Acyl-coenzyme A synthetase ACSM4, mitochondrial OS=Rattus norvegicus GN=Acsm4 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.046e-18 Identity = 52/139 (37.41%), Postives = 76/139 (54.68%), Query Frame = 3 Query: 84 YLKNPKANEETFANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKLCRAKMPAYWVPKSIVF-GPLPKTATGKIQKHVLR 497 Y+ NP+ + T +Y TGD GV D Y+ R+ D+IIS G I EVE+ + HPAV+E++VV+ D GE AF+ L SN ++L ++ + Y P+ + F LPKT TGKI+++VLR Sbjct: 435 YVDNPEKTDATIRRNFYITGDRGVMDDDGYLWFVGRADDVIISSGYRIGPFEVESALIEHPAVVESAVVSSPDPIRGEVVKAFIVLAAPFKSSNREKLTAELQDHVKNSTAPYKYPRKVEFVQELPKTITGKIKRNVLR 573
BLAST of CX299658 vs. ExPASy Swiss-Prot
Match: ENTE_ECOLI (Enterobactin synthase component E OS=Escherichia coli (strain K12) GN=entE PE=3 SV=3) HSP 1 Score: 93.2041 bits (230), Expect = 1.366e-18 Identity = 53/153 (34.64%), Postives = 84/153 (54.90%), Query Frame = 3 Query: 42 IGEIVMSGNVVMKGYLKNPKANEETF-ANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKLCRAKMPAYWVPKSIVFGPLPKTATGKIQKHVLR 497 +G ++ G +GY K+P+ N F ANG+Y +GDL P+ YI ++ R KD I GGE I++ E+EN++ HPAV+ A++V+ DE GE CA++ +K + ++ + + K+P + LP TA GK+ K LR Sbjct: 380 VGRLMTRGPYTFRGYYKSPQHNASAFDANGFYCSGDLISIDPEGYITVQGREKDQINRGGEKIAAEEIENLLLRHPAVIYAALVSMEDELMGEKSCAYLVVKEPLRAVQVRRFLRE-QGIAEFKLP----DRVECVDSLPLTAVGKVDKKQLR 527
BLAST of CX299658 vs. ExPASy Swiss-Prot
Match: ENTE_ECO57 (Enterobactin synthase component E OS=Escherichia coli O157:H7 GN=entE PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.366e-18 Identity = 53/153 (34.64%), Postives = 84/153 (54.90%), Query Frame = 3 Query: 42 IGEIVMSGNVVMKGYLKNPKANEETF-ANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKLCRAKMPAYWVPKSIVFGPLPKTATGKIQKHVLR 497 +G ++ G +GY K+P+ N F ANG+Y +GDL P+ YI ++ R KD I GGE I++ E+EN++ HPAV+ A++V+ DE GE CA++ +K + ++ + + K+P + LP TA GK+ K LR Sbjct: 380 VGRLMTRGPYTFRGYYKSPQHNASAFDANGFYCSGDLISIDPEGYITVQGREKDQINRGGEKIAAEEIENLLLRHPAVIYAALVSMEDELMGEKSCAYLVVKEPLRAVQVRRFLRE-QGIAEFKLP----DRVECVDSLPLTAVGKVDKKQLR 527
BLAST of CX299658 vs. ExPASy Swiss-Prot
Match: 4CLL7_ARATH (4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana GN=4CLL7 PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.366e-18 Identity = 57/152 (37.50%), Postives = 81/152 (53.29%), Query Frame = 3 Query: 45 GEIVMSGNVVMKGYLKNPKANEETF-ANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKLCRAKMPAYWVPKSIVFGPL-PKTATGKIQKHVL 494 GEI + G +MKGYL NP+A +ET W HTGDLG + D + + DR K++I G ++ E+E ++ HP +L+A V+ DE GE P AFV P N +DI K ++ Y + + F L PK+A GKI + L Sbjct: 390 GEIWVRGPNMMKGYLNNPQATKETIDKKSWVHTGDLGYFNEDGNLYVVDRIKELIKYKGFQVAPAELEGLLVSHPDILDAVVIPFPDEEAGEVPIAFVVRSP-----NSSITEQDIQKFIAKQVAPYKRLRRVSFISLVPKSAAGKILRREL 536
BLAST of CX299658 vs. ExPASy Swiss-Prot
Match: 4CL3_ORYSJ (Probable 4-coumarate--CoA ligase 3 OS=Oryza sativa subsp. japonica GN=4CL3 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.366e-18 Identity = 55/156 (35.26%), Postives = 86/156 (55.13%), Query Frame = 3 Query: 45 GEIVMSGNVVMKGYLKNPKANEETF-ANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKLCRAKMPAYW--VPKSIVFGPLPKTATGKIQKHVLRAK 503 GEI + G +MKGYL +P+A + T +GW HTGD+G D+ I I DR K+II G + E+E ++ HP + +A+VV+ D+ GE P AF+ ++ ++ ED +K AK ++ + K +PK +GKI + LRA+ Sbjct: 385 GEICIRGEQIMKGYLNDPEATKNTIDEDGWLHTGDIGFVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMKDDLAGEVPVAFIV------RTEGSEITEDEIKKFVAKEVVFYKRINKVFFTDSIPKNPSGKILRKDLRAR 534
BLAST of CX299658 vs. ExPASy Swiss-Prot
Match: 4CL2_ORYSJ (Probable 4-coumarate--CoA ligase 2 OS=Oryza sativa subsp. japonica GN=4CL2 PE=2 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 1.366e-18 Identity = 54/156 (34.62%), Postives = 88/156 (56.41%), Query Frame = 3 Query: 45 GEIVMSGNVVMKGYLKNPKANEETF-ANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKLCRAKMPAYW--VPKSIVFGPLPKTATGKIQKHVLRAK 503 GEI + G +MKGYL +P+A T GW HTGD+G D+ + I DR K++I G + E+E+++ HP++ +A+VV + D+ GE P AFV ++ + + E+ +K +K ++ + K +PK+A+GKI + LRAK Sbjct: 416 GEICIRGPQIMKGYLNDPEATAATIDVEGWLHTGDIGYVDDDDEVFIVDRVKELIKFKGFQVPPAELESLLIAHPSIADAAVVPQKDDVAGEVPVAFVV------RAADSDITEESIKEFISKQVVFYKRLHKVHFIHAIPKSASGKILRRELRAK 565
BLAST of CX299658 vs. ExPASy Swiss-Prot
Match: 4CL2_ARATH (4-coumarate--CoA ligase 2 OS=Arabidopsis thaliana GN=4CL2 PE=1 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 1.366e-18 Identity = 55/156 (35.26%), Postives = 87/156 (55.77%), Query Frame = 3 Query: 45 GEIVMSGNVVMKGYLKNPKANEETF-ANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKLCRAKMPAYW--VPKSIVFGPLPKTATGKIQKHVLRAK 503 GEI + GN +MKGYL +P A T +GW HTGD+G D+ + I DR K++I G ++ E+E+++ HP + + +VVA +E GE P AFV +S + ++ED +K +K ++ + K +PK +GKI + LRA+ Sbjct: 400 GEICIRGNQIMKGYLNDPLATASTIDKDGWLHTGDVGFIDDDDELFIVDRLKELIKYKGFQVAPAELESLLIGHPEINDVAVVAMKEEDAGEVPVAFVV------RSKDSNISEDEIKQFVSKQVVFYKRINKVFFTDSIPKAPSGKILRKDLRAR 549
BLAST of CX299658 vs. ExPASy Swiss-Prot
Match: 4CL1_TOBAC (4-coumarate--CoA ligase 1 OS=Nicotiana tabacum GN=4CL1 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.366e-18 Identity = 56/156 (35.90%), Postives = 87/156 (55.77%), Query Frame = 3 Query: 45 GEIVMSGNVVMKGYLKNPKANEETF-ANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKLCRAKMPAYW--VPKSIVFGPLPKTATGKIQKHVLRAK 503 GEI + G+ +MKGYL +P+A T GW HTGD+G D+ + I DR K++I G ++ E+E ++ HP + +A+VV DE+ GE P AFV +SN + ED +K +K ++ V + +PK+ +GKI + LRA+ Sbjct: 391 GEICIRGDQIMKGYLNDPEATTRTIDKEGWLHTGDIGFIDEDDELFIVDRLKELIKYKGFQVAPAEIEALLLNHPNISDAAVVPMKDEQAGEVPVAFVV------RSNGSAITEDEVKDFISKQVIFYKRVKRVFFVETVPKSPSGKILRKDLRAR 540 The following BLAST results are available for this feature:
BLAST of CX299658 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 249
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299658 ID=CX299658; Name=CX299658; organism=Citrus clementina; type=EST; length=683bpback to top |