CX299661
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX299661 vs. ExPASy Swiss-Prot
Match: SODM_BACST (Superoxide dismutase [Mn] OS=Bacillus stearothermophilus GN=sodA PE=1 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 4.198e-13 Identity = 33/64 (51.56%), Postives = 48/64 (75.00%), Query Frame = 3 Query: 6 LLVVSTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAKA 197 L + STPN +P++ +P+L +DVWEHAYYL +QNRRP+YI+ F + +V+W+ V+KR AKA Sbjct: 141 LEITSTPNQDSPIMEGKTPILGLDVWEHAYYLKYQNRRPEYIAAFWN-VVNWDEVAKRYSEAKA 203
BLAST of CX299661 vs. ExPASy Swiss-Prot
Match: SODM_STAEP (Superoxide dismutase [Mn/Fe] OS=Staphylococcus epidermidis GN=sodA PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 5.483e-13 Identity = 34/63 (53.97%), Postives = 46/63 (73.02%), Query Frame = 3 Query: 6 LLVVSTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 194 L +V+TPN NPL +P+L +DVWEHAYYL +QN+RPDYIS F + +V+WE V + +AK Sbjct: 138 LEIVTTPNQDNPLTEGKTPILGLDVWEHAYYLKYQNKRPDYISAFWN-VVNWEKVDELYNAAK 199
BLAST of CX299661 vs. ExPASy Swiss-Prot
Match: SODM_STAXY (Superoxide dismutase [Mn/Fe] OS=Staphylococcus xylosus GN=sodA PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 7.160e-13 Identity = 33/64 (51.56%), Postives = 47/64 (73.44%), Query Frame = 3 Query: 3 SLLVVSTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 194 +L +V+TPN NP+ +P+L +DVWEHAYYL +QN+RPDYIS F + +V+WE V + +AK Sbjct: 137 NLEIVTTPNQDNPITEGKTPILGLDVWEHAYYLKYQNKRPDYISAFWN-VVNWEKVDELYNAAK 199
BLAST of CX299661 vs. ExPASy Swiss-Prot
Match: SODF_SALTY (Superoxide dismutase [Fe] OS=Salmonella typhimurium GN=sodB PE=3 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 7.160e-13 Identity = 34/59 (57.63%), Postives = 44/59 (74.58%), Query Frame = 3 Query: 6 LLVVSTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRL 182 L +VST NA PL D +PLLT+DVWEHAYY+D++N RP+Y+ F LV+WE V+K L Sbjct: 134 LAIVSTSNAGTPLTTDATPLLTVDVWEHAYYIDYRNARPNYLEHFW-ALVNWEFVAKNL 191
BLAST of CX299661 vs. ExPASy Swiss-Prot
Match: SODF_SALTI (Superoxide dismutase [Fe] OS=Salmonella typhi GN=sodB PE=3 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 7.160e-13 Identity = 34/59 (57.63%), Postives = 44/59 (74.58%), Query Frame = 3 Query: 6 LLVVSTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRL 182 L +VST NA PL D +PLLT+DVWEHAYY+D++N RP+Y+ F LV+WE V+K L Sbjct: 134 LAIVSTSNAGTPLTTDATPLLTVDVWEHAYYIDYRNARPNYLEHFW-ALVNWEFVAKNL 191
BLAST of CX299661 vs. ExPASy Swiss-Prot
Match: SODF_SHIFL (Superoxide dismutase [Fe] OS=Shigella flexneri GN=sodB PE=3 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 1.221e-12 Identity = 34/59 (57.63%), Postives = 43/59 (72.88%), Query Frame = 3 Query: 6 LLVVSTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRL 182 L +VST NA PL D +PLLT+DVWEHAYY+D++N RP Y+ F LV+WE V+K L Sbjct: 134 LAIVSTSNAGTPLTTDATPLLTVDVWEHAYYIDYRNARPGYLEHFW-ALVNWEFVAKNL 191
BLAST of CX299661 vs. ExPASy Swiss-Prot
Match: SODF_RHIME (Superoxide dismutase [Mn] OS=Rhizobium meliloti GN=sodB PE=1 SV=3) HSP 1 Score: 72.7886 bits (177), Expect = 1.221e-12 Identity = 29/62 (46.77%), Postives = 44/62 (70.97%), Query Frame = 3 Query: 6 LLVVSTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESA 191 L + TPN NPLV +P+L +DVWEH+YY+D++N RP Y+ F+D L++W+ V + E+A Sbjct: 137 LEISKTPNGENPLVHGATPILGVDVWEHSYYIDYRNARPKYLEAFVDNLINWDYVLELYEAA 198
BLAST of CX299661 vs. ExPASy Swiss-Prot
Match: SODF_ECOLI (Superoxide dismutase [Fe] OS=Escherichia coli (strain K12) GN=sodB PE=1 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 1.221e-12 Identity = 34/59 (57.63%), Postives = 43/59 (72.88%), Query Frame = 3 Query: 6 LLVVSTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRL 182 L +VST NA PL D +PLLT+DVWEHAYY+D++N RP Y+ F LV+WE V+K L Sbjct: 134 LAIVSTSNAGTPLTTDATPLLTVDVWEHAYYIDYRNARPGYLEHFW-ALVNWEFVAKNL 191
BLAST of CX299661 vs. ExPASy Swiss-Prot
Match: SODF_ECOL6 (Superoxide dismutase [Fe] OS=Escherichia coli O6 GN=sodB PE=3 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 1.221e-12 Identity = 34/59 (57.63%), Postives = 43/59 (72.88%), Query Frame = 3 Query: 6 LLVVSTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRL 182 L +VST NA PL D +PLLT+DVWEHAYY+D++N RP Y+ F LV+WE V+K L Sbjct: 134 LAIVSTSNAGTPLTTDATPLLTVDVWEHAYYIDYRNARPGYLEHFW-ALVNWEFVAKNL 191
BLAST of CX299661 vs. ExPASy Swiss-Prot
Match: SODF_ECO57 (Superoxide dismutase [Fe] OS=Escherichia coli O157:H7 GN=sodB PE=3 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 1.221e-12 Identity = 34/59 (57.63%), Postives = 43/59 (72.88%), Query Frame = 3 Query: 6 LLVVSTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRL 182 L +VST NA PL D +PLLT+DVWEHAYY+D++N RP Y+ F LV+WE V+K L Sbjct: 134 LAIVSTSNAGTPLTTDATPLLTVDVWEHAYYIDYRNARPGYLEHFW-ALVNWEFVAKNL 191 The following BLAST results are available for this feature:
BLAST of CX299661 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 62
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299661 ID=CX299661; Name=CX299661; organism=Citrus clementina; type=EST; length=548bpback to top |