CX299661
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX299661 vs. ExPASy Swiss-Prot
Match: SODM_BORBU (Superoxide dismutase [Fe] OS=Borrelia burgdorferi GN=sod PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 6.062e-12 Identity = 32/57 (56.14%), Postives = 42/57 (73.68%), Query Frame = 3 Query: 6 LLVVSTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSK 176 L V+S PN +PL+ Y P+L IDVWEHAYYL +QNRR +Y+ F+ K ++WE VSK Sbjct: 141 LKVISMPNQDSPLMNSYKPILGIDVWEHAYYLKYQNRRIEYVDAFL-KALNWEEVSK 196
BLAST of CX299661 vs. ExPASy Swiss-Prot
Match: SODF_METJ (Superoxide dismutase [Mn/Fe] OS=Methylomonas J GN=sodB PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 7.917e-12 Identity = 33/64 (51.56%), Postives = 46/64 (71.88%), Query Frame = 3 Query: 6 LLVVSTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAKA 197 L+V ST N +PL +P+L +DVWEHAYYL +QNRRP+YI F + +V+W+ VS+R + A A Sbjct: 140 LVVESTGNQDSPLSTGNTPILGLDVWEHAYYLKYQNRRPEYIGAFFN-VVNWDEVSRRYQEALA 202
BLAST of CX299661 vs. ExPASy Swiss-Prot
Match: SODM_LISIV (Superoxide dismutase [Mn] OS=Listeria ivanovii GN=sodA PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.034e-11 Identity = 32/63 (50.79%), Postives = 46/63 (73.02%), Query Frame = 3 Query: 6 LLVVSTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 194 L +VST N +PL +P+L +DVWEHAYYL FQNRRP+YI F + +++W+ +KR ++AK Sbjct: 141 LEIVSTANQDSPLSEGKTPVLGLDVWEHAYYLKFQNRRPEYIDTFWN-VINWDERNKRFDAAK 202
BLAST of CX299661 vs. ExPASy Swiss-Prot
Match: SODF_RICCN (Superoxide dismutase [Mn/Fe] OS=Rickettsia conorii GN=sodB PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.034e-11 Identity = 26/59 (44.07%), Postives = 40/59 (67.80%), Query Frame = 3 Query: 6 LLVVSTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRL 182 L ++ T NA P+ PLL DVWEHAYY+D++N+RPDY+ +F+ +++W+ V L Sbjct: 149 LQIIKTANAGTPIAHGMKPLLACDVWEHAYYIDYRNKRPDYVDIFIKHMINWKFVEDNL 207
BLAST of CX299661 vs. ExPASy Swiss-Prot
Match: SODM2_PLEBO (Superoxide dismutase [Mn] 2 OS=Plectonema boryanum GN=sodA2 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.350e-11 Identity = 27/62 (43.55%), Postives = 49/62 (79.03%), Query Frame = 3 Query: 6 LLVVSTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESA 191 L ++STPN +PL+ ++P++ DVWEHAYYL +QNRRP+Y++ + + +++WE +++R ++A Sbjct: 142 LQILSTPNQDSPLIEGHTPIMGNDVWEHAYYLKYQNRRPEYLNAWWN-VLNWEEINRRFDAA 202
BLAST of CX299661 vs. ExPASy Swiss-Prot
Match: SODF_RICFE (Superoxide dismutase [Mn/Fe] OS=Rickettsia felis GN=sodB PE=3 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 1.764e-11 Identity = 26/59 (44.07%), Postives = 40/59 (67.80%), Query Frame = 3 Query: 6 LLVVSTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRL 182 L ++ T NA P+ PLL DVWEHAYY+D++N+RPDY+ +F+ +++W+ V L Sbjct: 149 LQIIKTANAGTPIANGMKPLLACDVWEHAYYIDYRNKRPDYVDIFIKHMINWKFVEDNL 207
BLAST of CX299661 vs. ExPASy Swiss-Prot
Match: SODM_XANCP (Superoxide dismutase [Mn] OS=Xanthomonas campestris pv. campestris GN=sodA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.008e-11 Identity = 32/64 (50.00%), Postives = 45/64 (70.31%), Query Frame = 3 Query: 6 LLVVSTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAKA 197 ++V ST N +PL +P+L +DVWEHAYYL +QNRRPDYI F + +V+W+ V +R +A A Sbjct: 141 VVVESTANQDSPLFEGNTPILGLDVWEHAYYLKYQNRRPDYIGAFYN-VVNWDEVERRYHAAIA 203
BLAST of CX299661 vs. ExPASy Swiss-Prot
Match: SODM_XANC8 (Superoxide dismutase [Mn] OS=Xanthomonas campestris pv. campestris (strain 8004) GN=sodA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.008e-11 Identity = 32/64 (50.00%), Postives = 45/64 (70.31%), Query Frame = 3 Query: 6 LLVVSTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAKA 197 ++V ST N +PL +P+L +DVWEHAYYL +QNRRPDYI F + +V+W+ V +R +A A Sbjct: 141 VVVESTANQDSPLFEGNTPILGLDVWEHAYYLKYQNRRPDYIGAFYN-VVNWDEVERRYHAAIA 203
BLAST of CX299661 vs. ExPASy Swiss-Prot
Match: SODM_HAEIN (Superoxide dismutase [Mn] OS=Haemophilus influenzae GN=sodA PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 3.008e-11 Identity = 37/70 (52.86%), Postives = 46/70 (65.71%), Query Frame = 3 Query: 6 LLVVSTPNAVNPLVW------DYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAKA 197 L VVST N NPL+ + PLL +DVWEHAYYL FQNRRPDYI F + +V+W+ V++R E A Sbjct: 141 LAVVSTANQDNPLMGKEVAGCEGFPLLGLDVWEHAYYLKFQNRRPDYIKEFWN-VVNWDFVAERFEQKTA 209
BLAST of CX299661 vs. ExPASy Swiss-Prot
Match: SODM_PSEAE (Superoxide dismutase [Mn] OS=Pseudomonas aeruginosa GN=sodA PE=3 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 5.131e-11 Identity = 32/65 (49.23%), Postives = 45/65 (69.23%), Query Frame = 3 Query: 3 SLLVVSTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAKA 197 SLLV S+ N +PL+ +P+L +DVWEHAYYL +QNRRP+YI F + ++ W V++R A A Sbjct: 140 SLLVESSGNQDSPLMNGNTPILGLDVWEHAYYLKYQNRRPEYIGAFYN-VIDWREVARRYAQALA 203 The following BLAST results are available for this feature:
BLAST of CX299661 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 62
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299661 ID=CX299661; Name=CX299661; organism=Citrus clementina; type=EST; length=548bpback to top |