CX299687
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299687 vs. ExPASy Swiss-Prot
Match: CESA8_ORYSJ (Probable cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA8 PE=2 SV=1) HSP 1 Score: 285.804 bits (730), Expect = 6.712e-77 Identity = 135/159 (84.91%), Postives = 141/159 (88.68%), Query Frame = 1 Query: 1 RNEQFWVIGGVSSHLFAVLQGLLKVLAGIDTNFTVTFKASDEDGDFTELYMFKWXXXXXXXXXXXVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWTILLACIFSLLWVRVDPFTTRVTGPDVEQCGINC 477 RNEQFWVIGG+S+HLFAV QGLLKVLAGIDTNFTVT KASDEDGDF ELYMFKW +INLVGVVAG+SYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVW ILLA IFSLLWVR+DPFTTRVTGPD + CGINC Sbjct: 923 RNEQFWVIGGISAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFAELYMFKWTTLLIPPTTILIINLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWAILLASIFSLLWVRIDPFTTRVTGPDTQTCGINC 1081
BLAST of CX299687 vs. ExPASy Swiss-Prot
Match: CESA3_ARATH (Cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Arabidopsis thaliana GN=CESA3 PE=1 SV=2) HSP 1 Score: 283.108 bits (723), Expect = 4.351e-76 Identity = 132/159 (83.02%), Postives = 143/159 (89.94%), Query Frame = 1 Query: 1 RNEQFWVIGGVSSHLFAVLQGLLKVLAGIDTNFTVTFKASDEDGDFTELYMFKWXXXXXXXXXXXVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWTILLACIFSLLWVRVDPFTTRVTGPDVEQCGINC 477 RNEQFWVIGGVS+HLFAV QG+LKVLAGIDTNFTVT KASDEDGDF ELY+FKW ++NLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVW++LLA IFSLLWVR+DPFT+RVTGPD+ +CGINC Sbjct: 907 RNEQFWVIGGVSAHLFAVFQGILKVLAGIDTNFTVTSKASDEDGDFAELYLFKWTTLLIPPTTLLIVNLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSVLLASIFSLLWVRIDPFTSRVTGPDILECGINC 1065
BLAST of CX299687 vs. ExPASy Swiss-Prot
Match: CESA2_ORYSJ (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA2 PE=2 SV=1) HSP 1 Score: 283.108 bits (723), Expect = 4.351e-76 Identity = 133/159 (83.65%), Postives = 142/159 (89.31%), Query Frame = 1 Query: 1 RNEQFWVIGGVSSHLFAVLQGLLKVLAGIDTNFTVTFKASDEDGDFTELYMFKWXXXXXXXXXXXVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWTILLACIFSLLWVRVDPFTTRVTGPDVEQCGINC 477 RNEQFWVIGG+S+HLFAV QGLLKVLAGIDT+FTVT KASDE+GDF ELYMFKW +INLVGVVAG+SYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVW ILLA IFSLLWVR+DPFTTRVTGPD ++CGINC Sbjct: 915 RNEQFWVIGGISAHLFAVFQGLLKVLAGIDTSFTVTSKASDEEGDFAELYMFKWTTLLIPPTTILIINLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWAILLASIFSLLWVRIDPFTTRVTGPDTQKCGINC 1073
BLAST of CX299687 vs. ExPASy Swiss-Prot
Match: CESA2_ORYSI (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA2 PE=2 SV=1) HSP 1 Score: 283.108 bits (723), Expect = 4.351e-76 Identity = 133/159 (83.65%), Postives = 142/159 (89.31%), Query Frame = 1 Query: 1 RNEQFWVIGGVSSHLFAVLQGLLKVLAGIDTNFTVTFKASDEDGDFTELYMFKWXXXXXXXXXXXVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWTILLACIFSLLWVRVDPFTTRVTGPDVEQCGINC 477 RNEQFWVIGG+S+HLFAV QGLLKVLAGIDT+FTVT KASDE+GDF ELYMFKW +INLVGVVAG+SYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVW ILLA IFSLLWVR+DPFTTRVTGPD ++CGINC Sbjct: 915 RNEQFWVIGGISAHLFAVFQGLLKVLAGIDTSFTVTSKASDEEGDFAELYMFKWTTLLIPPTTILIINLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWAILLASIFSLLWVRIDPFTTRVTGPDTQKCGINC 1073
BLAST of CX299687 vs. ExPASy Swiss-Prot
Match: CESA9_ORYSJ (Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA9 PE=2 SV=1) HSP 1 Score: 257.299 bits (656), Expect = 2.557e-68 Identity = 121/160 (75.62%), Postives = 137/160 (85.62%), Query Frame = 1 Query: 1 RNEQFWVIGGVSSHLFAVLQGLLKVLAGIDTNFTVTFKAS-DEDGDFTELYMFKWXXXXXXXXXXXVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWTILLACIFSLLWVRVDPFTTRVTGPDVEQCGINC 477 RNEQFWVIGGVS+HLFAV+QGLLKVLAGIDTNFTVT KA+ DED +F ELY FKW ++N++GVVAGVS AIN+G ++WGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVV+W++LLA IFSLLWVR+DPFT + GPDV QCGINC Sbjct: 896 RNEQFWVIGGVSAHLFAVVQGLLKVLAGIDTNFTVTSKATGDEDDEFAELYAFKWTTLLIPPTTLLILNIIGVVAGVSDAINNGSEAWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFTIKARGPDVRQCGINC 1055
BLAST of CX299687 vs. ExPASy Swiss-Prot
Match: CESA9_ORYSI (Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA9 PE=2 SV=1) HSP 1 Score: 257.299 bits (656), Expect = 2.557e-68 Identity = 121/160 (75.62%), Postives = 137/160 (85.62%), Query Frame = 1 Query: 1 RNEQFWVIGGVSSHLFAVLQGLLKVLAGIDTNFTVTFKAS-DEDGDFTELYMFKWXXXXXXXXXXXVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWTILLACIFSLLWVRVDPFTTRVTGPDVEQCGINC 477 RNEQFWVIGGVS+HLFAV+QGLLKVLAGIDTNFTVT KA+ DED +F ELY FKW ++N++GVVAGVS AIN+G ++WGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVV+W++LLA IFSLLWVR+DPFT + GPDV QCGINC Sbjct: 896 RNEQFWVIGGVSAHLFAVVQGLLKVLAGIDTNFTVTSKATGDEDDEFAELYAFKWTTLLIPPTTLLILNIIGVVAGVSDAINNGSEAWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFTIKARGPDVRQCGINC 1055
BLAST of CX299687 vs. ExPASy Swiss-Prot
Match: CESA7_ARATH (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Arabidopsis thaliana GN=CESA7 PE=1 SV=1) HSP 1 Score: 256.914 bits (655), Expect = 3.339e-68 Identity = 119/159 (74.84%), Postives = 136/159 (85.53%), Query Frame = 1 Query: 1 RNEQFWVIGGVSSHLFAVLQGLLKVLAGIDTNFTVTFKASDEDGDFTELYMFKWXXXXXXXXXXXVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWTILLACIFSLLWVRVDPFTTRVTGPDVEQCGINC 477 RNEQFWVIGG+S+HLFAV+QGLLK+LAGIDTNFTVT KA+D+D DF ELY FKW +IN+VGVVAG+S AIN+GYQSWGPLFGKLFF+FWVIVHLYPFLKGLMGRQNRTPTIVV+W++LLA IFSLLWVR+DPF + GPD +CGINC Sbjct: 869 RNEQFWVIGGISAHLFAVVQGLLKILAGIDTNFTVTSKATDDD-DFGELYAFKWTTLLIPPTTVLIINIVGVVAGISDAINNGYQSWGPLFGKLFFSFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVLKTKGPDTSKCGINC 1026
BLAST of CX299687 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSJ (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA1 PE=2 SV=1) HSP 1 Score: 253.447 bits (646), Expect = 3.692e-67 Identity = 121/160 (75.62%), Postives = 134/160 (83.75%), Query Frame = 1 Query: 1 RNEQFWVIGGVSSHLFAVLQGLLKVLAGIDTNFTVTFKASDEDGDFTELYMFKWXXXXXXXXXXXVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWTILLACIFSLLWVRVDPFTTRV-TGPDVEQCGINC 477 RNEQFWVIGG S+HLFAV QGLLKVLAGIDTNFTVT KASDEDGDF ELY+FKW VINLVG+VAG+SYAINSGYQSWGPLFGKLFF+ WVI+HLYPFLKGLMGRQNRTPTIV+VW+ILLA IFSLLWV++DPF + + QCG+NC Sbjct: 917 RNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFAELYVFKWTSLLIPPTTVLVINLVGMVAGISYAINSGYQSWGPLFGKLFFSIWVILHLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLLWVKIDPFISPTQKAVALGQCGVNC 1076
BLAST of CX299687 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSI (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA1 PE=2 SV=1) HSP 1 Score: 253.447 bits (646), Expect = 3.692e-67 Identity = 121/160 (75.62%), Postives = 134/160 (83.75%), Query Frame = 1 Query: 1 RNEQFWVIGGVSSHLFAVLQGLLKVLAGIDTNFTVTFKASDEDGDFTELYMFKWXXXXXXXXXXXVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWTILLACIFSLLWVRVDPFTTRV-TGPDVEQCGINC 477 RNEQFWVIGG S+HLFAV QGLLKVLAGIDTNFTVT KASDEDGDF ELY+FKW VINLVG+VAG+SYAINSGYQSWGPLFGKLFF+ WVI+HLYPFLKGLMGRQNRTPTIV+VW+ILLA IFSLLWV++DPF + + QCG+NC Sbjct: 917 RNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFAELYVFKWTSLLIPPTTVLVINLVGMVAGISYAINSGYQSWGPLFGKLFFSIWVILHLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLLWVKIDPFISPTQKAVALGQCGVNC 1076
BLAST of CX299687 vs. ExPASy Swiss-Prot
Match: CESA6_ORYSJ (Probable cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA6 PE=2 SV=1) HSP 1 Score: 246.128 bits (627), Expect = 5.894e-65 Identity = 115/159 (72.33%), Postives = 135/159 (84.91%), Query Frame = 1 Query: 1 RNEQFWVIGGVSSHLFAVLQGLLKVLAGIDTNFTVTFKASDEDGDFTELYMFKWXXXXXXXXXXXVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWTILLACIFSLLWVRVDPFTTRVTGPDVEQCGINC 477 RNEQFWVIGGVSSHLFAV QGLLKVLAG+DT+FTVT KA D++ +F+ELY FKW ++N +GVVAGVS AIN+GY+SWGPLFGKLFFAFWVIVHLYPFLKGL+GRQNRTPTIV+VW+ILLA IFSLLWVR+DPF + GP +E+CG++C Sbjct: 934 RNEQFWVIGGVSSHLFAVFQGLLKVLAGVDTSFTVTSKAGDDE-EFSELYTFKWTTLLIPPTTLLLLNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKNNGPLLEECGLDC 1091 The following BLAST results are available for this feature:
BLAST of CX299687 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299687 ID=CX299687; Name=CX299687; organism=Citrus clementina; type=EST; length=479bpback to top |