CX299687
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299687 vs. ExPASy Swiss-Prot
Match: CESA4_ARATH (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Arabidopsis thaliana GN=CESA4 PE=1 SV=1) HSP 1 Score: 245.743 bits (626), Expect = 7.697e-65 Identity = 117/160 (73.12%), Postives = 135/160 (84.38%), Query Frame = 1 Query: 1 RNEQFWVIGGVSSHLFAVLQGLLKVLAGIDTNFTVTFK-ASDEDGDFTELYMFKWXXXXXXXXXXXVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWTILLACIFSLLWVRVDPFTTRVTGPDVEQCGINC 477 RNEQFWVIGGVS+HLFAV QGLLKVL G+DTNFTVT K ASDE +F +LY+FKW ++N+VGVVAGVS AIN+GY SWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVV+W+ILLA IFSL+WVR+DPF + TGP ++QCG++C Sbjct: 890 RNEQFWVIGGVSAHLFAVFQGLLKVLFGVDTNFTVTSKGASDEADEFGDLYLFKWTTLLIPPTTLIILNMVGVVAGVSDAINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVLWSILLASIFSLVWVRIDPFLPKQTGPLLKQCGVDC 1049
BLAST of CX299687 vs. ExPASy Swiss-Prot
Match: CESA5_ORYSJ (Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA5 PE=2 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 2.925e-64 Identity = 114/159 (71.70%), Postives = 134/159 (84.28%), Query Frame = 1 Query: 1 RNEQFWVIGGVSSHLFAVLQGLLKVLAGIDTNFTVTFKASDEDGDFTELYMFKWXXXXXXXXXXXVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWTILLACIFSLLWVRVDPFTTRVTGPDVEQCGINC 477 RNEQFWVIGGVSSHLFAV QGLLKV+AGIDT+FTVT K D++ +F+ELY FKW ++N +GVVAGVS AIN+GY+SWGPLFGKLFFAFWVIVHLYPFLKGL+GRQNRTPTIV+VW+ILLA IFSLLWVR+DPF + GP +E+CG++C Sbjct: 934 RNEQFWVIGGVSSHLFAVFQGLLKVIAGIDTSFTVTSKGGDDE-EFSELYTFKWTTLLIPPTTLLLLNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKNDGPLLEECGLDC 1091
BLAST of CX299687 vs. ExPASy Swiss-Prot
Match: CESA5_ORYSI (Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA5 PE=2 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 2.925e-64 Identity = 114/159 (71.70%), Postives = 134/159 (84.28%), Query Frame = 1 Query: 1 RNEQFWVIGGVSSHLFAVLQGLLKVLAGIDTNFTVTFKASDEDGDFTELYMFKWXXXXXXXXXXXVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWTILLACIFSLLWVRVDPFTTRVTGPDVEQCGINC 477 RNEQFWVIGGVSSHLFAV QGLLKV+AGIDT+FTVT K D++ +F+ELY FKW ++N +GVVAGVS AIN+GY+SWGPLFGKLFFAFWVIVHLYPFLKGL+GRQNRTPTIV+VW+ILLA IFSLLWVR+DPF + GP +E+CG++C Sbjct: 934 RNEQFWVIGGVSSHLFAVFQGLLKVIAGIDTSFTVTSKGGDDE-EFSELYTFKWTTLLIPPTTLLLLNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKNDGPLLEECGLDC 1091
BLAST of CX299687 vs. ExPASy Swiss-Prot
Match: CESA3_ORYSJ (Probable cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA3 PE=2 SV=1) HSP 1 Score: 242.662 bits (618), Expect = 6.516e-64 Identity = 113/159 (71.07%), Postives = 134/159 (84.28%), Query Frame = 1 Query: 1 RNEQFWVIGGVSSHLFAVLQGLLKVLAGIDTNFTVTFKASDEDGDFTELYMFKWXXXXXXXXXXXVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWTILLACIFSLLWVRVDPFTTRVTGPDVEQCGINC 477 RNEQFWVIGGVSSHLFA+ QGLLKV+AGIDT+FTVT K D++ +F+ELY FKW ++N +GVVAGVS AIN+GY+SWGPLFGKLFFAFWVIVHLYPFLKGL+GRQNRTPTIV+VW+ILLA IFSLLWVR+DPF + GP +E+CG++C Sbjct: 935 RNEQFWVIGGVSSHLFALFQGLLKVIAGIDTSFTVTSKGGDDE-EFSELYTFKWTTLLIPPTTLLLLNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKNDGPLLEECGLDC 1092
BLAST of CX299687 vs. ExPASy Swiss-Prot
Match: CESA1_ARATH (Cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Arabidopsis thaliana GN=CESA1 PE=1 SV=1) HSP 1 Score: 242.662 bits (618), Expect = 6.516e-64 Identity = 111/143 (77.62%), Postives = 125/143 (87.41%), Query Frame = 1 Query: 1 RNEQFWVIGGVSSHLFAVLQGLLKVLAGIDTNFTVTFKASDEDGDFTELYMFKWXXXXXXXXXXXVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWTILLACIFSLLWVRVDPF 429 RNEQFWVIGG S+HLFAV QGLLKVLAGIDTNFTVT KA+DEDGDF ELY+FKW ++NL+G+VAGVSYA+NSGYQSWGPLFGKLFFA WVI HLYPFLKGL+GRQNRTPTIV+VW++LLA IFSLLWVR++PF Sbjct: 922 RNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKATDEDGDFAELYIFKWTALLIPPTTVLLVNLIGIVAGVSYAVNSGYQSWGPLFGKLFFALWVIAHLYPFLKGLLGRQNRTPTIVIVWSVLLASIFSLLWVRINPF 1064
BLAST of CX299687 vs. ExPASy Swiss-Prot
Match: CESAA_ARATH (Probable cellulose synthase A catalytic subunit 10 [UDP-forming] OS=Arabidopsis thaliana GN=CESA10 PE=2 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 7.205e-63 Identity = 111/145 (76.55%), Postives = 123/145 (84.83%), Query Frame = 1 Query: 1 RNEQFWVIGGVSSHLFAVLQGLLKVLAGIDTNFTVTFKASDEDGDFTELYMFKWXXXXXXXXXXXVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWTILLACIFSLLWVRVDPFTT 435 RNEQFWVIGG S+HLFAV QGLLKV AGIDTNFTVT KASDEDGDF ELY+FKW ++NLVG+VAGVSYAINSGYQSWGPL GKL FAFWV+ HLYPFLKGL+GRQNRTPTIV+VW+ LLA IFSLLWVR++PF + Sbjct: 909 RNEQFWVIGGTSAHLFAVFQGLLKVFAGIDTNFTVTSKASDEDGDFAELYVFKWTSLLIPPTTILLVNLVGIVAGVSYAINSGYQSWGPLMGKLLFAFWVVAHLYPFLKGLLGRQNRTPTIVIVWSALLASIFSLLWVRINPFVS 1053
BLAST of CX299687 vs. ExPASy Swiss-Prot
Match: CESA7_ORYSJ (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA7 PE=2 SV=1) HSP 1 Score: 238.81 bits (608), Expect = 9.410e-63 Identity = 112/160 (70.00%), Postives = 132/160 (82.50%), Query Frame = 1 Query: 1 RNEQFWVIGGVSSHLFAVLQGLLKVLAGIDTNFTVTFKAS-DEDGDFTELYMFKWXXXXXXXXXXXVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWTILLACIFSLLWVRVDPFTTRVTGPDVEQCGINC 477 RNEQFWVIGGVS+HLFAV QGLLKVL G+DTNFTVT KA+ DE F ELY+FKW +IN+VG+VAGVS A+N+GY SWGPLFGKLFF+FWVI+HLYPFLKGLMGRQNRTPTIVV+W+ILLA IFSL+WVR+DPF + GP ++ CG++C Sbjct: 904 RNEQFWVIGGVSAHLFAVFQGLLKVLGGVDTNFTVTSKAAADETDAFGELYLFKWTTLLVPPTTLIIINMVGIVAGVSDAVNNGYGSWGPLFGKLFFSFWVILHLYPFLKGLMGRQNRTPTIVVLWSILLASIFSLVWVRIDPFIPKPKGPVLKPCGVSC 1063
BLAST of CX299687 vs. ExPASy Swiss-Prot
Match: CESA9_ARATH (Probable cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Arabidopsis thaliana GN=CESA9 PE=2 SV=1) HSP 1 Score: 229.565 bits (584), Expect = 5.709e-60 Identity = 108/159 (67.92%), Postives = 132/159 (83.02%), Query Frame = 1 Query: 1 RNEQFWVIGGVSSHLFAVLQGLLKVLAGIDTNFTVTFKASDEDGDFTELYMFKWXXXXXXXXXXXVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWTILLACIFSLLWVRVDPFTTRVTGPDVEQCGINC 477 RNEQFWVIGGVSSHLFA+ QGLLKVLAG+ TNFTVT KA+D DG+F+ELY+FKW +IN+VGV+ GVS AIN+GY SWGPLFG+LFFA WVIVHLYPFLKGL+G+Q+R PTI++VW+ILLA I +LLWVRV+PF ++ GP +E CG++C Sbjct: 930 RNEQFWVIGGVSSHLFALFQGLLKVLAGVSTNFTVTSKAAD-DGEFSELYIFKWTSLLIPPTTLLIINIVGVIVGVSDAINNGYDSWGPLFGRLFFALWVIVHLYPFLKGLLGKQDRVPTIILVWSILLASILTLLWVRVNPFVSK-DGPVLEICGLDC 1086
BLAST of CX299687 vs. ExPASy Swiss-Prot
Match: CESA6_ARATH (Cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Arabidopsis thaliana GN=CESA6 PE=1 SV=2) HSP 1 Score: 226.868 bits (577), Expect = 3.700e-59 Identity = 105/159 (66.04%), Postives = 132/159 (83.02%), Query Frame = 1 Query: 1 RNEQFWVIGGVSSHLFAVLQGLLKVLAGIDTNFTVTFKASDEDGDFTELYMFKWXXXXXXXXXXXVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWTILLACIFSLLWVRVDPFTTRVTGPDVEQCGINC 477 RNEQFWVIGGVS+HLFA+ QGLLKVLAG+DTNFTVT KA+D DG+F++LY+FKW +IN++GV+ GVS AI++GY SWGPLFG+LFFA WVI+HLYPFLKGL+G+Q+R PTI+VVW+ILLA I +LLWVRV+PF + GP +E CG++C Sbjct: 927 RNEQFWVIGGVSAHLFALFQGLLKVLAGVDTNFTVTSKAAD-DGEFSDLYLFKWTSLLIPPMTLLIINVIGVIVGVSDAISNGYDSWGPLFGRLFFALWVIIHLYPFLKGLLGKQDRMPTIIVVWSILLASILTLLWVRVNPFVAK-GGPILEICGLDC 1083
BLAST of CX299687 vs. ExPASy Swiss-Prot
Match: CESA5_ARATH (Cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Arabidopsis thaliana GN=CESA5 PE=1 SV=2) HSP 1 Score: 226.098 bits (575), Expect = 6.312e-59 Identity = 104/159 (65.41%), Postives = 133/159 (83.65%), Query Frame = 1 Query: 1 RNEQFWVIGGVSSHLFAVLQGLLKVLAGIDTNFTVTFKASDEDGDFTELYMFKWXXXXXXXXXXXVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWTILLACIFSLLWVRVDPFTTRVTGPDVEQCGINC 477 RNEQFWVIGGVS+HLFA+ QGLLKVLAG++TNFTVT KA+D DG+F+ELY+FKW +IN++GV+ G+S AI++GY SWGPLFG+LFFAFWVI+HLYPFLKGL+G+Q+R PTI++VW+ILLA I +LLWVRV+PF + GP +E CG++C Sbjct: 912 RNEQFWVIGGVSAHLFALFQGLLKVLAGVETNFTVTSKAAD-DGEFSELYIFKWTSLLIPPTTLLIINVIGVIVGISDAISNGYDSWGPLFGRLFFAFWVILHLYPFLKGLLGKQDRMPTIILVWSILLASILTLLWVRVNPFVAK-GGPILEICGLDC 1068 The following BLAST results are available for this feature:
BLAST of CX299687 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299687 ID=CX299687; Name=CX299687; organism=Citrus clementina; type=EST; length=479bpback to top |