CX299687
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299687 vs. ExPASy Swiss-Prot
Match: CESA2_ARATH (Cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Arabidopsis thaliana GN=CESA2 PE=1 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 1.836e-58 Identity = 105/159 (66.04%), Postives = 130/159 (81.76%), Query Frame = 1 Query: 1 RNEQFWVIGGVSSHLFAVLQGLLKVLAGIDTNFTVTFKASDEDGDFTELYMFKWXXXXXXXXXXXVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWTILLACIFSLLWVRVDPFTTRVTGPDVEQCGINC 477 RNEQFWVIGG SSHLFA+ QGLLKVLAG++TNFTVT KA+D DG F+ELY+FKW +IN++GV+ GVS AI++GY SWGPLFG+LFFA WVIVHLYPFLKG++G+Q++ PTI+VVW+ILLA I +LLWVRV+PF + GP +E CG+NC Sbjct: 926 RNEQFWVIGGASSHLFALFQGLLKVLAGVNTNFTVTSKAAD-DGAFSELYIFKWTTLLIPPTTLLIINIIGVIVGVSDAISNGYDSWGPLFGRLFFALWVIVHLYPFLKGMLGKQDKMPTIIVVWSILLASILTLLWVRVNPFVAK-GGPVLEICGLNC 1082
BLAST of CX299687 vs. ExPASy Swiss-Prot
Match: CESA4_ORYSJ (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA4 PE=2 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 5.343e-58 Identity = 104/143 (72.73%), Postives = 123/143 (86.01%), Query Frame = 1 Query: 1 RNEQFWVIGGVSSHLFAVLQGLLKVLAGIDTNFTVTFKASDEDGDFTELYMFKWXXXXXXXXXXXVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWTILLACIFSLLWVRVDPF 429 RNEQFWVIGGVS+HLFAV QG+LK++AG+DTNFTVT KA+D D +F ELY+FKW V+NLVGVVAG S A+NSGY+SWGPLFGK+FFA WVI+HLYPFLKGLMGRQNRTPTIVV+W++LLA +FSLLWV++DPF Sbjct: 831 RNEQFWVIGGVSAHLFAVFQGILKMIAGLDTNFTVTAKATD-DTEFGELYVFKWTTVLIPPTSILVLNLVGVVAGFSDALNSGYESWGPLFGKVFFAMWVIMHLYPFLKGLMGRQNRTPTIVVLWSVLLASVFSLLWVKIDPF 972
BLAST of CX299687 vs. ExPASy Swiss-Prot
Match: CESA4_ORYSI (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA4 PE=2 SV=2) HSP 1 Score: 223.016 bits (567), Expect = 5.343e-58 Identity = 104/143 (72.73%), Postives = 123/143 (86.01%), Query Frame = 1 Query: 1 RNEQFWVIGGVSSHLFAVLQGLLKVLAGIDTNFTVTFKASDEDGDFTELYMFKWXXXXXXXXXXXVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWTILLACIFSLLWVRVDPF 429 RNEQFWVIGGVS+HLFAV QG+LK++AG+DTNFTVT KA+D D +F ELY+FKW V+NLVGVVAG S A+NSGY+SWGPLFGK+FFA WVI+HLYPFLKGLMGRQNRTPTIVV+W++LLA +FSLLWV++DPF Sbjct: 831 RNEQFWVIGGVSAHLFAVFQGILKMIAGLDTNFTVTAKATD-DTEFGELYVFKWTTVLIPPTSILVLNLVGVVAGFSDALNSGYESWGPLFGKVFFAMWVIMHLYPFLKGLMGRQNRTPTIVVLWSVLLASVFSLLWVKIDPF 972
BLAST of CX299687 vs. ExPASy Swiss-Prot
Match: CESA8_ARATH (Cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Arabidopsis thaliana GN=CESA8 PE=1 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 4.523e-57 Identity = 104/159 (65.41%), Postives = 126/159 (79.25%), Query Frame = 1 Query: 1 RNEQFWVIGGVSSHLFAVLQGLLKVLAGIDTNFTVTFKASDEDGDFTELYMFKWXXXXXXXXXXXVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWTILLACIFSLLWVRVDPFTTRVTGPDVEQCGINC 477 RNEQFWVIGGVS+HLFAV QG LK+LAG+DTNFTVT K +D D +F ELY+ KW +INLVGVVAG S A+N GY++WGPLFGK+FFAFWVI+HLYPFLKGLMGRQNRTPTIV++W+ILLA +FSL+WVR++PF ++ D +NC Sbjct: 826 RNEQFWVIGGVSAHLFAVFQGFLKMLAGLDTNFTVTSKTAD-DLEFGELYIVKWTTLLIPPTSLLIINLVGVVAGFSDALNKGYEAWGPLFGKVFFAFWVILHLYPFLKGLMGRQNRTPTIVILWSILLASVFSLVWVRINPFVSKT---DTTSLSLNC 980
BLAST of CX299687 vs. ExPASy Swiss-Prot
Match: CSLD2_ORYSJ (Cellulose synthase-like protein D2 OS=Oryza sativa subsp. japonica GN=CSLD2 PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 4.253e-39 Identity = 76/144 (52.78%), Postives = 98/144 (68.06%), Query Frame = 1 Query: 1 RNEQFWVIGGVSSHLFAVLQGLLKVLAGIDTNFTVTFKASDEDGD--FTELYMFKWXXXXXXXXXXXVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWTILLACIFSLLWVRVDP 426 RNEQFW+IGG S+HL AVLQGLLKV+AGI+ +FT+T K+ ++ D F +LY+ KW ++NL+ + G S I S W L G +FF+FWV+ HLYPF KGLMGR+ RTPTIV VW+ LLA SLLWV ++P Sbjct: 1013 RNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDEADDEFADLYIVKWTSLMIPPIVIMMVNLIAIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLLAITISLLWVAINP 1156
BLAST of CX299687 vs. ExPASy Swiss-Prot
Match: CSLD2_ORYSI (Cellulose synthase-like protein D2 OS=Oryza sativa subsp. indica GN=CSLD2 PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 4.253e-39 Identity = 76/144 (52.78%), Postives = 98/144 (68.06%), Query Frame = 1 Query: 1 RNEQFWVIGGVSSHLFAVLQGLLKVLAGIDTNFTVTFKASDEDGD--FTELYMFKWXXXXXXXXXXXVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWTILLACIFSLLWVRVDP 426 RNEQFW+IGG S+HL AVLQGLLKV+AGI+ +FT+T K+ ++ D F +LY+ KW ++NL+ + G S I S W L G +FF+FWV+ HLYPF KGLMGR+ RTPTIV VW+ LLA SLLWV ++P Sbjct: 1013 RNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDEADDEFADLYIVKWTSLMIPPIVIMMVNLIAIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLLAITISLLWVAINP 1156
BLAST of CX299687 vs. ExPASy Swiss-Prot
Match: CSLD2_ARATH (Cellulose synthase-like protein D2 OS=Arabidopsis thaliana GN=CSLD2 PE=2 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 5.555e-39 Identity = 76/144 (52.78%), Postives = 98/144 (68.06%), Query Frame = 1 Query: 1 RNEQFWVIGGVSSHLFAVLQGLLKVLAGIDTNFTVTFKAS--DEDGDFTELYMFKWXXXXXXXXXXXVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWTILLACIFSLLWVRVDP 426 RNEQFW+IGG S+HL AVLQGLLKV+AG++ +FT+T K+ D D +F +LYM KW ++NL+ + G S I S W L G +FF+FWV+ HLYPF KGLMGR+ RTPTIV VW+ L+A SLLWV ++P Sbjct: 988 RNEQFWLIGGTSAHLAAVLQGLLKVVAGVEISFTLTSKSGGDDIDDEFADLYMVKWTSLMIPPITIIMVNLIAIAVGFSRTIYSVVPQWSKLIGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVYVWSGLVAITISLLWVAINP 1131
BLAST of CX299687 vs. ExPASy Swiss-Prot
Match: CSLD1_ORYSJ (Cellulose synthase-like protein D1 OS=Oryza sativa subsp. japonica GN=CSLD1 PE=2 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 7.255e-39 Identity = 78/144 (54.17%), Postives = 95/144 (65.97%), Query Frame = 1 Query: 1 RNEQFWVIGGVSSHLFAVLQGLLKVLAGIDTNFTVTFK--ASDEDGDFTELYMFKWXXXXXXXXXXXVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWTILLACIFSLLWVRVDP 426 RNEQFW+IGG S+HL AVLQGLLKV+AGI+ +FT+T K D D +F ELY KW +INLV + G S I S W L G +FF+FWV+ HLYPF KGLMGR+ RTPTIV VW+ L+A SLLW+ + P Sbjct: 968 RNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKQLGDDVDDEFAELYAVKWTSLMIPPLTIIMINLVAIAVGFSRTIYSTIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVYVWSGLVAITISLLWIAIKP 1111
BLAST of CX299687 vs. ExPASy Swiss-Prot
Match: CSLD1_ORYSI (Cellulose synthase-like protein D1 OS=Oryza sativa subsp. indica GN=CSLD1 PE=2 SV=2) HSP 1 Score: 159.458 bits (402), Expect = 7.255e-39 Identity = 78/144 (54.17%), Postives = 95/144 (65.97%), Query Frame = 1 Query: 1 RNEQFWVIGGVSSHLFAVLQGLLKVLAGIDTNFTVTFK--ASDEDGDFTELYMFKWXXXXXXXXXXXVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWTILLACIFSLLWVRVDP 426 RNEQFW+IGG S+HL AVLQGLLKV+AGI+ +FT+T K D D +F ELY KW +INLV + G S I S W L G +FF+FWV+ HLYPF KGLMGR+ RTPTIV VW+ L+A SLLW+ + P Sbjct: 968 RNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKQLGDDVDDEFAELYAVKWTSLMIPPLTIIMINLVAIAVGFSRTIYSTIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVYVWSGLVAITISLLWIAIKP 1111
BLAST of CX299687 vs. ExPASy Swiss-Prot
Match: CSLD3_ARATH (Cellulose synthase-like protein D3 OS=Arabidopsis thaliana GN=CSLD3 PE=1 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 9.475e-39 Identity = 76/144 (52.78%), Postives = 98/144 (68.06%), Query Frame = 1 Query: 1 RNEQFWVIGGVSSHLFAVLQGLLKVLAGIDTNFTVTFKASDEDGD--FTELYMFKWXXXXXXXXXXXVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWTILLACIFSLLWVRVDP 426 RNEQFW+IGG S+HL AV+QGLLKV+AGI+ +FT+T K+ ED D F +LY+ KW ++NL+ + G S I S W L G +FF+FWV+ HLYPF KGLMGR+ RTPTIV VW+ L+A SLLWV ++P Sbjct: 988 RNEQFWLIGGTSAHLAAVIQGLLKVVAGIEISFTLTSKSGGEDVDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGFSRTIYSVIPQWSKLIGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVYVWSGLVAITISLLWVAINP 1131 The following BLAST results are available for this feature:
BLAST of CX299687 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299687 ID=CX299687; Name=CX299687; organism=Citrus clementina; type=EST; length=479bpback to top |