CX299690

Overview
NameCX299690
Unique NameCX299690
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length507
Libraries
Library NameType
NTLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX299690 vs. ExPASy Swiss-Prot
Match: SAP14_ORYSJ (Zinc finger AN1 domain-containing stress-associated protein 14 OS=Oryza sativa subsp. japonica GN=SAP14 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 2.281e-20
Identity = 39/59 (66.10%), Postives = 51/59 (86.44%), Query Frame = 3
Query:  258 SRCSSCKKKVGLTGFKCRCGNLYCGSHRYSDKHDCQFDYRSAGRDAIAKANPVVKAEKL 434
            +RC++C++KVGLTGFKCRCG  +CG HRY+D+H C FDY+S+GR+ IAK NPVV A+KL
Sbjct:  175 NRCATCRRKVGLTGFKCRCGGTFCGGHRYADEHGCGFDYKSSGRELIAKQNPVVVADKL 233          
BLAST of CX299690 vs. ExPASy Swiss-Prot
Match: ZFAN5_MOUSE (AN1-type zinc finger protein 5 OS=Mus musculus GN=Zfand5 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 6.636e-20
Identity = 51/145 (35.17%), Postives = 71/145 (48.97%), Query Frame = 3
Query:   12 ANMNMCSKCYKDTILKQEQAKLAATSIENLVNGSNASEKGPVVVDSVDM-QPAVLETKXXXXXXXXXXXXXXXXXXXKTKVGPSRCSSCKKKVGLTGFKCRCGNLYCGSHRYSDKHDCQFDYRSAGRDAIAKANPVVKAEKLDKI 443
            A +N C      T  K     +AA  +   +   + S +  +     ++ +P V +                     K K   +RC  C+KKVGLTGF CRCGNL+CG HRYSDKH+C +DY++     I K NPVV AEK+ +I
Sbjct:   71 AGLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITTPKTEVSEPVVTQPSPSVSQPSSSQSEEKAPELPKPK--KNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI 213          
BLAST of CX299690 vs. ExPASy Swiss-Prot
Match: ZFAN5_HUMAN (AN1-type zinc finger protein 5 OS=Homo sapiens GN=ZFAND5 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.478e-19
Identity = 50/144 (34.72%), Postives = 71/144 (49.31%), Query Frame = 3
Query:   15 NMNMCSKCYKDTILKQEQAKLAATSIENLVNGSNASEKGPVVVDSVDM-QPAVLETKXXXXXXXXXXXXXXXXXXXKTKVGPSRCSSCKKKVGLTGFKCRCGNLYCGSHRYSDKHDCQFDYRSAGRDAIAKANPVVKAEKLDKI 443
            ++N C      T  K     +AA  +   +   + S +  +     ++ +P V +                     K K   +RC  C+KKVGLTGF CRCGNL+CG HRYSDKH+C +DY++     I K NPVV AEK+ +I
Sbjct:   72 SLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITTPKTEVSEPVVTQPSPSVSQPSTSQSEEKAPELPKPK--KNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI 213          
BLAST of CX299690 vs. ExPASy Swiss-Prot
Match: SAP15_ORYSJ (Zinc finger AN1 domain-containing stress-associated protein 15 OS=Oryza sativa subsp. japonica GN=SAP15 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.478e-19
Identity = 37/62 (59.68%), Postives = 53/62 (85.48%), Query Frame = 3
Query:  258 SRCSSCKKKVGLTGFKCRCGNLYCGSHRYSDKHDCQFDYRSAGRDAIAKANPVVKAEKLDKI 443
            +RC+ C+K+VGLTGF+CRCG L+C  HR+S+ H+C FDY++AGR+ IA+ANPV++A K+ KI
Sbjct:  113 NRCNVCRKRVGLTGFRCRCGELFCPRHRHSETHECSFDYKTAGREEIARANPVIRAAKIIKI 174          
BLAST of CX299690 vs. ExPASy Swiss-Prot
Match: ZFAN6_PONAB (AN1-type zinc finger protein 6 OS=Pongo abelii GN=ZFAND6 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 4.302e-19
Identity = 60/187 (32.09%), Postives = 84/187 (44.92%), Query Frame = 3
Query:    3 GSAANMNMCSKCYKDTILKQEQAK----LAATSIENLVNG--------------------SNASEKGPVV-------------VDSVDMQPAVLETKXXXXXXXXXXXXXXXXXXX---KTKVGPSRCSSCKKKVGLTGFKCRCGNLYCGSHRYSDKHDCQFDYRSAGRDAIAKANPVVKAEKLDKI 443
            G+     MCS CYK+ + +Q  +       ATS+ +L                       S++ +  PV              +DS  +  AV ET+                      K K   +RC  C+KKVGLTGF+CRCGN+YCG HRYSD H+C ++Y++   + I K NPVV  EK+ KI
Sbjct:   22 GNPRTNGMCSVCYKEHLQRQNSSNGRISPPATSVSSLSESLPVQCTDGSVPEAQSTLDSTSSSMQPSPVSNQSLLSESVASSQLDSTSVDKAVPETEDLQASVSDTAQQPSEEQSKSLEKPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRKENPVVVGEKIQKI 208          
BLAST of CX299690 vs. ExPASy Swiss-Prot
Match: ZFAN6_HUMAN (AN1-type zinc finger protein 6 OS=Homo sapiens GN=ZFAND6 PE=2 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 4.302e-19
Identity = 60/187 (32.09%), Postives = 84/187 (44.92%), Query Frame = 3
Query:    3 GSAANMNMCSKCYKDTILKQEQAK----LAATSIENLVNG--------------------SNASEKGPVV-------------VDSVDMQPAVLETKXXXXXXXXXXXXXXXXXXX---KTKVGPSRCSSCKKKVGLTGFKCRCGNLYCGSHRYSDKHDCQFDYRSAGRDAIAKANPVVKAEKLDKI 443
            G+     MCS CYK+ + +Q  +       ATS+ +L                       S++ +  PV              +DS  +  AV ET+                      K K   +RC  C+KKVGLTGF+CRCGN+YCG HRYSD H+C ++Y++   + I K NPVV  EK+ KI
Sbjct:   22 GNPRTNGMCSVCYKEHLQRQNSSNGRISPPATSVSSLSESLPVQCTDGSVPEAQSALDSTSSSMQPSPVSNQSLLSESVASSQLDSTSVDKAVPETEDVQASVSDTAQQPSEEQSKSLEKPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRKENPVVVGEKIQKI 208          
BLAST of CX299690 vs. ExPASy Swiss-Prot
Match: SAP12_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 12 OS=Oryza sativa subsp. japonica GN=SAP12 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 4.302e-19
Identity = 52/146 (35.62%), Postives = 73/146 (50.00%), Query Frame = 3
Query:    3 GSAANMNMCSKCYKDTILKQEQAKLAATSIENLVNGSNASEKGPVVVDSVDMQPAVLETKXXXXXXXXXXXXXXXXXXXKTKVGPSRCSSCKKKVGLTGFKCRCGNLYCGSHRYSDKHDCQFDYRSAGRDAIAKANPVVKAEKLDK 440
            GS    NMCSKCY+D         L ATS   L + S++         +V + PA                             P+RC +C+KKVGL GF+CRCG  +C +HR++DKH C FD++ + R+ IAK NP++ A K+ K
Sbjct:   89 GSKETNNMCSKCYRD--------HLKATS--PLFSSSSSPATASTTDITVPIAPATT-APTPSLKGKEEEATAAASSSAAAAAKPNRCVACRKKVGLLGFECRCGGTFCSTHRHADKHACTFDFKKSDREKIAKENPLIVAPKITK 223          
BLAST of CX299690 vs. ExPASy Swiss-Prot
Match: ZFAN6_RAT (AN1-type zinc finger protein 6 OS=Rattus norvegicus GN=Zfand6 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 7.337e-19
Identity = 39/68 (57.35%), Postives = 50/68 (73.53%), Query Frame = 3
Query:  240 KTKVGPSRCSSCKKKVGLTGFKCRCGNLYCGSHRYSDKHDCQFDYRSAGRDAIAKANPVVKAEKLDKI 443
            K K   +RC  C+KKVGLTGF+CRCGN+YCG HRYSD H+C ++Y++   + I K NPVV  EK+ KI
Sbjct:  156 KPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRKENPVVVGEKIQKI 223          
BLAST of CX299690 vs. ExPASy Swiss-Prot
Match: ZFAN6_MOUSE (AN1-type zinc finger protein 6 OS=Mus musculus GN=Zfand6 PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 7.337e-19
Identity = 39/68 (57.35%), Postives = 50/68 (73.53%), Query Frame = 3
Query:  240 KTKVGPSRCSSCKKKVGLTGFKCRCGNLYCGSHRYSDKHDCQFDYRSAGRDAIAKANPVVKAEKLDKI 443
            K K   +RC  C+KKVGLTGF+CRCGN+YCG HRYSD H+C ++Y++   + I K NPVV  EK+ KI
Sbjct:  156 KPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRKENPVVVGEKIQKI 223          
BLAST of CX299690 vs. ExPASy Swiss-Prot
Match: ZFAN6_BOVIN (AN1-type zinc finger protein 6 OS=Bos taurus GN=ZFAND6 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 7.337e-19
Identity = 39/68 (57.35%), Postives = 50/68 (73.53%), Query Frame = 3
Query:  240 KTKVGPSRCSSCKKKVGLTGFKCRCGNLYCGSHRYSDKHDCQFDYRSAGRDAIAKANPVVKAEKLDKI 443
            K K   +RC  C+KKVGLTGF+CRCGN+YCG HRYSD H+C ++Y++   + I K NPVV  EK+ KI
Sbjct:  141 KPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRKENPVVVGEKIQKI 208          
The following BLAST results are available for this feature:
BLAST of CX299690 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
SAP14_ORYSJ2.281e-2066.10Zinc finger AN1 domain-containing stress-associate... [more]
ZFAN5_MOUSE6.636e-2035.17AN1-type zinc finger protein 5 OS=Mus musculus GN=... [more]
ZFAN5_HUMAN1.478e-1934.72AN1-type zinc finger protein 5 OS=Homo sapiens GN=... [more]
SAP15_ORYSJ1.478e-1959.68Zinc finger AN1 domain-containing stress-associate... [more]
ZFAN6_PONAB4.302e-1932.09AN1-type zinc finger protein 6 OS=Pongo abelii GN=... [more]
ZFAN6_HUMAN4.302e-1932.09AN1-type zinc finger protein 6 OS=Homo sapiens GN=... [more]
SAP12_ORYSJ4.302e-1935.62Zinc finger A20 and AN1 domain-containing stress-a... [more]
ZFAN6_RAT7.337e-1957.35AN1-type zinc finger protein 6 OS=Rattus norvegicu... [more]
ZFAN6_MOUSE7.337e-1957.35AN1-type zinc finger protein 6 OS=Mus musculus GN=... [more]
ZFAN6_BOVIN7.337e-1957.35AN1-type zinc finger protein 6 OS=Bos taurus GN=ZF... [more]

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Properties
Property NameValue
Genbank descriptionC07001B11SK NTLeaf1 Citrus clementina cDNA clone C07001B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX299690 ID=CX299690; Name=CX299690; organism=Citrus clementina; type=EST; length=507bp
TTGGAAGTGCTGCAAACATGAATATGTGCTCCAAGTGTTACAAGGACACT
ATTTTGAAACAGGAACAAGCAAAGCTTGCAGCGACATCTATTGAAAACCT
TGTAAATGGATCAAATGCTAGTGAGAAGGGGCCAGTTGTTGTTGACTCTG
TAGACATGCAACCTGCCGTGCTGGAAACAAAATCTGTTGTCGCTTTGTCA
TCACCTCCATCTTCAAGTGCCGGTGAAGCTGCTGAATTGAAGACTAAGGT
GGGTCCTAGTCGGTGCAGCTCTTGCAAGAAAAAGGTTGGTTTGACTGGAT
TCAAATGCCGCTGTGGGAACCTTTACTGTGGATCACACCGCTACTCAGAC
AAACATGACTGCCAGTTTGACTACCGCTCTGCTGGTCGCGATGCTATTGC
AAAGGCCAATCCTGTTGTGAAGGCTGAAAAACTTGACAAGATCTAGAATG
GGTTGCTGGTCTCAAATTTCGTGCTTTCCTTTTAGTTCAAAAGAGGACTT
ACTCTGA
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