CX299722
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299722 vs. ExPASy Swiss-Prot
Match: RS16_PIG (40S ribosomal protein S16 OS=Sus scrofa GN=RPS16 PE=2 SV=4) HSP 1 Score: 107.071 bits (266), Expect = 4.026e-23 Identity = 47/69 (68.12%), Postives = 59/69 (85.51%), Query Frame = 3 Query: 264 TAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQ 470 TA AV +CKRG GLIK+NG P+E++EP L++K EP+LLLG+ RFAGVD+R+RVKGGGH +QIYAIRQ Sbjct: 18 TATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKGGGHVAQIYAIRQ 86
BLAST of CX299722 vs. ExPASy Swiss-Prot
Match: RS16_MOUSE (40S ribosomal protein S16 OS=Mus musculus GN=Rps16 PE=2 SV=4) HSP 1 Score: 107.071 bits (266), Expect = 4.026e-23 Identity = 47/69 (68.12%), Postives = 59/69 (85.51%), Query Frame = 3 Query: 264 TAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQ 470 TA AV +CKRG GLIK+NG P+E++EP L++K EP+LLLG+ RFAGVD+R+RVKGGGH +QIYAIRQ Sbjct: 18 TATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKGGGHVAQIYAIRQ 86
BLAST of CX299722 vs. ExPASy Swiss-Prot
Match: RS16_HUMAN (40S ribosomal protein S16 OS=Homo sapiens GN=RPS16 PE=1 SV=2) HSP 1 Score: 107.071 bits (266), Expect = 4.026e-23 Identity = 47/69 (68.12%), Postives = 59/69 (85.51%), Query Frame = 3 Query: 264 TAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQ 470 TA AV +CKRG GLIK+NG P+E++EP L++K EP+LLLG+ RFAGVD+R+RVKGGGH +QIYAIRQ Sbjct: 18 TATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKGGGHVAQIYAIRQ 86
BLAST of CX299722 vs. ExPASy Swiss-Prot
Match: RS16_BOVIN (40S ribosomal protein S16 OS=Bos taurus GN=RPS16 PE=2 SV=3) HSP 1 Score: 107.071 bits (266), Expect = 4.026e-23 Identity = 47/69 (68.12%), Postives = 59/69 (85.51%), Query Frame = 3 Query: 264 TAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQ 470 TA AV +CKRG GLIK+NG P+E++EP L++K EP+LLLG+ RFAGVD+R+RVKGGGH +QIYAIRQ Sbjct: 18 TATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKGGGHVAQIYAIRQ 86
BLAST of CX299722 vs. ExPASy Swiss-Prot
Match: RS16_ICTPU (40S ribosomal protein S16 OS=Ictalurus punctatus GN=rps16 PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 1.530e-22 Identity = 46/69 (66.67%), Postives = 58/69 (84.06%), Query Frame = 3 Query: 264 TAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQ 470 TA AV +CKRG GLIK+NG P+E +EP L++K EP+LLLG+ RFAGVD+R+RVKGGGH +Q+YAIRQ Sbjct: 18 TATAVAHCKRGNGLIKVNGRPLETIEPATLQYKLLEPVLLLGKERFAGVDIRVRVKGGGHVAQVYAIRQ 86
BLAST of CX299722 vs. ExPASy Swiss-Prot
Match: RS16_HETFO (40S ribosomal protein S16 OS=Heteropneustes fossilis GN=rps16 PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 1.530e-22 Identity = 46/69 (66.67%), Postives = 58/69 (84.06%), Query Frame = 3 Query: 264 TAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQ 470 TA AV +CKRG GLIK+NG P+E +EP L++K EP+LLLG+ RFAGVD+R+RVKGGGH +Q+YAIRQ Sbjct: 18 TATAVAHCKRGNGLIKVNGRPLETIEPATLQYKLLEPVLLLGKERFAGVDIRVRVKGGGHVAQVYAIRQ 86
BLAST of CX299722 vs. ExPASy Swiss-Prot
Match: RS16_DROME (40S ribosomal protein S16 OS=Drosophila melanogaster GN=RpS16 PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 1.530e-22 Identity = 45/69 (65.22%), Postives = 59/69 (85.51%), Query Frame = 3 Query: 264 TAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQ 470 TA AV YCKRG GL+K+NG P+E +EP++L++K EP+LLLG+ +FAGVD+R+RV GGGH +QIYAIRQ Sbjct: 20 TATAVAYCKRGNGLLKVNGRPLEQIEPKVLQYKLQEPLLLLGKEKFAGVDIRVRVSGGGHVAQIYAIRQ 88
BLAST of CX299722 vs. ExPASy Swiss-Prot
Match: RS16_AEDAE (40S ribosomal protein S16 OS=Aedes aegypti GN=RpS16 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 3.409e-22 Identity = 44/69 (63.77%), Postives = 60/69 (86.96%), Query Frame = 3 Query: 264 TAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQ 470 TA AV YCKRG+GL+++NG P++ +EP++L++K EP+LLLG+ +FAGVD+RIRV GGGH +QIYAIRQ Sbjct: 20 TATAVAYCKRGKGLLRVNGRPLDQIEPKVLQYKLQEPLLLLGKEKFAGVDIRIRVSGGGHVAQIYAIRQ 88
BLAST of CX299722 vs. ExPASy Swiss-Prot
Match: RS16_SCHPO (40S ribosomal protein S16 OS=Schizosaccharomyces pombe GN=rps16a PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 4.452e-22 Identity = 47/68 (69.12%), Postives = 56/68 (82.35%), Query Frame = 3 Query: 267 AVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQ 470 A AV +CK G+GLIK+NG P+ LV+PEILR K YEPIL+ G +FAGVD+R+RV GGGH SQIYAIRQ Sbjct: 13 ATAVAHCKVGKGLIKVNGAPLSLVQPEILRMKVYEPILVAGADKFAGVDIRVRVSGGGHVSQIYAIRQ 80
BLAST of CX299722 vs. ExPASy Swiss-Prot
Match: RS16_SPOFR (40S ribosomal protein S16 OS=Spodoptera frugiperda GN=RpS16 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 9.918e-22 Identity = 43/69 (62.32%), Postives = 59/69 (85.51%), Query Frame = 3 Query: 264 TAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQ 470 TA AV YCKRG G++++NG P++LVEP +L++K EPILLLG+ +F+GVD+R+ VKGGGH +Q+YAIRQ Sbjct: 23 TATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSGVDIRVTVKGGGHVAQVYAIRQ 91 The following BLAST results are available for this feature:
BLAST of CX299722 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX299722 ID=CX299722; Name=CX299722; organism=Citrus clementina; type=EST; length=472bpback to top |