CX299739
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299739 vs. ExPASy Swiss-Prot
Match: FAL1_GIBZE (ATP-dependent RNA helicase FAL1 OS=Gibberella zeae GN=FAL1 PE=3 SV=1) HSP 1 Score: 226.098 bits (575), Expect = 7.464e-59 Identity = 108/151 (71.52%), Postives = 129/151 (85.43%), Query Frame = 1 Query: 1 EEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 453 E+WK +TLCDLY+TL ITQ+VIF NTRRKVDWLTDKMR + TVS+ HGDM Q RD IM++FR G+SRVLI+TD+ ARGIDVQQVSLVINYDLP+ ENY+HRIGRSGRFGRKGVAINFVT +D R+L DI+ +Y+ I+E+P NVADL+ Sbjct: 250 EDWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGDMPQKERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTTEDVRILRDIELYYSTQIDEMPMNVADLI 400
BLAST of CX299739 vs. ExPASy Swiss-Prot
Match: FAL1_CRYNE (ATP-dependent RNA helicase FAL1 OS=Cryptococcus neoformans GN=FAL1 PE=3 SV=1) HSP 1 Score: 226.098 bits (575), Expect = 7.464e-59 Identity = 110/150 (73.33%), Postives = 127/150 (84.67%), Query Frame = 1 Query: 1 EEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADL 450 E+WK +TLCDLY+TL ITQ+VIF NTRRKVDWLT+KMR + TVS+ HG+M Q RD IM EFR G SRVLITTD+ ARGIDVQQVSLVINYDLPT ENYLHRIGRSGRFGRKGVAINFVT DD R+L DI+++Y+ I+E+P NVA+L Sbjct: 246 EDWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTEKMREANFTVSSMHGEMVQKERDAIMAEFRGGQSRVLITTDVWARGIDVQQVSLVINYDLPTSRENYLHRIGRSGRFGRKGVAINFVTVDDVRILRDIEQYYSTQIDEMPMNVAEL 395
BLAST of CX299739 vs. ExPASy Swiss-Prot
Match: FAL1_BOTFB (ATP-dependent RNA helicase fal1 OS=Botryotinia fuckeliana (strain B05.10) GN=fal1 PE=3 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 1.663e-58 Identity = 108/151 (71.52%), Postives = 128/151 (84.77%), Query Frame = 1 Query: 1 EEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 453 E+WK +TLCDLY+TL ITQ+VIF NTRRKVDWLTDKMR + TVS+ HG+M Q RD IM++FR G+SRVLI+TD+ ARGIDVQQVSLVINYDLP ENY+HRIGRSGRFGRKGVAINFVT +D R+L DI+ +Y+ I+E+P NVADLL Sbjct: 248 EDWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPVNRENYIHRIGRSGRFGRKGVAINFVTSEDVRILRDIELYYSTQIDEMPMNVADLL 398
BLAST of CX299739 vs. ExPASy Swiss-Prot
Match: RH34_ORYSJ (DEAD-box ATP-dependent RNA helicase 34 OS=Oryza sativa subsp. japonica GN=Os03g0566800 PE=2 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 3.704e-58 Identity = 107/151 (70.86%), Postives = 129/151 (85.43%), Query Frame = 1 Query: 1 EEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 453 EEWK +TLCDLY+TL ITQ+VIF NT+RKVDWLT++MRS + TVSA HGDM Q RD IM EFRSG++RVLITTD+ ARG+DVQQVSLVINYDLP E Y+HRIGRSGRFGRKGVAINFV ++D R+L DI+++Y+ I+E+P NVADL+ Sbjct: 254 EEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTERMRSNNFTVSAMHGDMPQKERDAIMGEFRSGATRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKKEDIRILRDIEQYYSTQIDEMPMNVADLI 404
BLAST of CX299739 vs. ExPASy Swiss-Prot
Match: RH2_ORYSJ (DEAD-box ATP-dependent RNA helicase 2 OS=Oryza sativa subsp. japonica GN=Os01g0639100 PE=2 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 3.704e-58 Identity = 107/151 (70.86%), Postives = 129/151 (85.43%), Query Frame = 1 Query: 1 EEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 453 EEWK +TLCDLY+TL ITQ+VIF NT+RKVDWLT++MRS + TVSA HGDM Q RD IM EFRSG++RVLITTD+ ARG+DVQQVSLVINYDLP E Y+HRIGRSGRFGRKGVAINFV ++D R+L DI+++Y+ I+E+P NVADL+ Sbjct: 254 EEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTERMRSNNFTVSAMHGDMPQKERDAIMGEFRSGATRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKKEDIRILRDIEQYYSTQIDEMPMNVADLI 404
BLAST of CX299739 vs. ExPASy Swiss-Prot
Match: FAL1_SCHPO (ATP-dependent RNA helicase fal1 OS=Schizosaccharomyces pombe GN=tif412 PE=1 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 1.408e-57 Identity = 103/151 (68.21%), Postives = 128/151 (84.77%), Query Frame = 1 Query: 1 EEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 453 EEWK +TLCDLY+TL ITQ+VIF N+RRKVDWLT+KMR + TV++ HG+M Q RD IM++FR G+SRVLI TD+ ARGIDVQQVSLVINYDLP ENY+HRIGRSGRFGRKGVAINFVT +D R+L DI+++Y+ VI+E+P N+ D++ Sbjct: 244 EEWKFDTLCDLYDTLTITQAVIFCNSRRKVDWLTEKMREANFTVTSMHGEMPQKERDAIMQDFRQGNSRVLICTDIWARGIDVQQVSLVINYDLPANRENYIHRIGRSGRFGRKGVAINFVTNEDVRILRDIEQYYSTVIDEMPMNIGDMV 394
BLAST of CX299739 vs. ExPASy Swiss-Prot
Match: RH2_ARATH (DEAD-box ATP-dependent RNA helicase 2 OS=Arabidopsis thaliana GN=RH2 PE=2 SV=2) HSP 1 Score: 220.32 bits (560), Expect = 4.096e-57 Identity = 107/151 (70.86%), Postives = 127/151 (84.11%), Query Frame = 1 Query: 1 EEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 453 EEWK +TLCDLY+TL ITQ+VIF NT+RKVD+L++KMRS + TVS+ HGDM Q RD IM EFRSG SRVLITTD+ ARGIDVQQVSLVINYDLP E Y+HRIGRSGRFGRKGVAINFV DD ++L DI+++Y+ I+E+P NVADL+ Sbjct: 258 EEWKFDTLCDLYDTLTITQAVIFCNTKRKVDYLSEKMRSHNFTVSSMHGDMPQKERDAIMNEFRSGDSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI 408
BLAST of CX299739 vs. ExPASy Swiss-Prot
Match: IF4A_CAEEL (Eukaryotic initiation factor 4A OS=Caenorhabditis elegans GN=inf-1 PE=2 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 6.986e-57 Identity = 106/151 (70.20%), Postives = 123/151 (81.46%), Query Frame = 1 Query: 1 EEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 453 +EWK + LCDLY + +TQ+VIF NTRRKVD LT+KM TVS HGDMDQ RD IMREFRSGSSRVLITTD+LARGIDVQQVSLVINYDLP+ ENY+HRIGRSGRFGRKGVAINFVT +D R L +I+ +Y IEE+P ++ADL+ Sbjct: 252 DEWKFDCLCDLYNVVNVTQAVIFCNTRRKVDTLTEKMTENQFTVSCLHGDMDQAERDTIMREFRSGSSRVLITTDILARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTENDARQLKEIESYYTTQIEEMPESIADLI 402
BLAST of CX299739 vs. ExPASy Swiss-Prot
Match: IF4A3_NICPL (Eukaryotic initiation factor 4A-3 OS=Nicotiana plumbaginifolia PE=2 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 6.986e-57 Identity = 105/151 (69.54%), Postives = 125/151 (82.78%), Query Frame = 1 Query: 1 EEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 453 EEWK +TLCDLY+TL ITQ+VIF NT+RKVDWLT KMR + TVS+ HGDM Q RD IM EFR G++RVLITTD+ ARG+DVQQVSLVINYDLP E Y+HRIGRSGRFGRKGVAINFV DD ++L DI+++Y+ I+E+P NVADL+ Sbjct: 241 EEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTSKMRENNFTVSSMHGDMPQKERDAIMAEFRGGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI 391
BLAST of CX299739 vs. ExPASy Swiss-Prot
Match: IF4A_CRYPV (Eukaryotic initiation factor 4A OS=Cryptosporidium parvum GN=EIF4-A PE=2 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 9.124e-57 Identity = 105/151 (69.54%), Postives = 125/151 (82.78%), Query Frame = 1 Query: 1 EEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 453 +EWK++TL DLYETL I Q++I+ NTRR+VD LT +MR RD T S+ HGDMDQ R++IMR+FRSGSSRVLITTDLLARGIDVQQVSLVINYDLP PE Y+HRIGRSGRFG+KGV+INFVT DD L DI++ YN IEE+P + D+L Sbjct: 254 DEWKMDTLIDLYETLTIVQAIIYCNTRRRVDQLTKQMRERDFTCSSMHGDMDQKDREVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPVSPETYIHRIGRSGRFGKKGVSINFVTDDDIVCLRDIERHYNTQIEEMPMGITDIL 404 The following BLAST results are available for this feature:
BLAST of CX299739 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX299739 ID=CX299739; Name=CX299739; organism=Citrus clementina; type=EST; length=515bpback to top |