CX299781
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299781 vs. ExPASy Swiss-Prot
Match: TRPB_PSEAE (Tryptophan synthase beta chain OS=Pseudomonas aeruginosa GN=trpB PE=3 SV=2) HSP 1 Score: 151.754 bits (382), Expect = 1.760e-36 Identity = 74/115 (64.35%), Postives = 91/115 (79.13%), Query Frame = 1 Query: 1 GVLHGALSYLLQDEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYLQ 345 GVLHG ++LLQD DGQII+ HSISAGLDYPG+GPEH++L D GR EY ++TDDEALEAF RLEGIIPALE++HALA + K P+L +VVN SGRGDKD+QT + ++Q Sbjct: 283 GVLHGNRTFLLQDADGQIIDAHSISAGLDYPGIGPEHAWLHDTGRVEYTSITDDEALEAFHTCCRLEGIIPALESSHALAEVFKRAPSLPKEHIMVVNLSGRGDKDMQTVMHHMQ 397
BLAST of CX299781 vs. ExPASy Swiss-Prot
Match: TRPB_RHILO (Tryptophan synthase beta chain OS=Rhizobium loti GN=trpB PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 2.299e-36 Identity = 73/114 (64.04%), Postives = 89/114 (78.07%), Query Frame = 1 Query: 1 GVLHGALSYLLQDEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYL 342 GVLHG +YLLQ+ DGQI++ HSISAGLDYPGVGPEHS+L+D GR EY + DDEALEAFK ++R+EGIIPALE+AHA+A+ K+ P + V+VN SGRGDKDV T L Sbjct: 299 GVLHGNRTYLLQNADGQIMDGHSISAGLDYPGVGPEHSWLRDSGRVEYVPILDDEALEAFKLTTRVEGIIPALESAHAIAHAVKIVPAMDKDQIVIVNLSGRGDKDVHTVASML 412
BLAST of CX299781 vs. ExPASy Swiss-Prot
Match: TRPB_OCHA4 (Tryptophan synthase beta chain OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=trpB PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 2.299e-36 Identity = 72/114 (63.16%), Postives = 89/114 (78.07%), Query Frame = 1 Query: 1 GVLHGALSYLLQDEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYL 342 GVLHG +YLLQ++DGQI+E HS+SAGLDYPGVGPEHS+LKD GR +Y + DDEAL+AF+ +R EGIIPALE+AHA+A K+ PT+ ++VN SGRGDKDV T K L Sbjct: 289 GVLHGNRTYLLQNDDGQILEGHSVSAGLDYPGVGPEHSWLKDSGRVDYVPILDDEALDAFQLCTRTEGIIPALESAHAIAQAVKMAPTMGKDQVMIVNLSGRGDKDVHTVGKLL 402
BLAST of CX299781 vs. ExPASy Swiss-Prot
Match: TRPB_BACHK (Tryptophan synthase beta chain OS=Bacillus thuringiensis subsp. konkukian GN=trpB PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 2.299e-36 Identity = 71/115 (61.74%), Postives = 93/115 (80.87%), Query Frame = 1 Query: 1 GVLHGALSYLLQDEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYLQ 345 GVLHG++ YLLQ+E+GQI E HSISAGLDYPGVGPEHS LKD GR Y+++TDDEALEAF+ ++ EGIIPALE++HA+AY KL P + + +V+ SGRGDKDV++ +Y++ Sbjct: 281 GVLHGSMMYLLQNEEGQIQEAHSISAGLDYPGVGPEHSLLKDIGRVSYHSITDDEALEAFQLLTKKEGIIPALESSHAVAYALKLAPQMKEDEGLVICLSGRGDKDVESIKRYME 395
BLAST of CX299781 vs. ExPASy Swiss-Prot
Match: TRPB_BACCZ (Tryptophan synthase beta chain OS=Bacillus cereus (strain ZK / E33L) GN=trpB PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 2.299e-36 Identity = 71/115 (61.74%), Postives = 93/115 (80.87%), Query Frame = 1 Query: 1 GVLHGALSYLLQDEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYLQ 345 GVLHG++ YLLQ+E+GQI E HSISAGLDYPGVGPEHS LKD GR Y+++TDDEALEAF+ ++ EGIIPALE++HA+AY KL P + + +V+ SGRGDKDV++ +Y++ Sbjct: 281 GVLHGSMMYLLQNEEGQIQEAHSISAGLDYPGVGPEHSLLKDIGRVSYHSITDDEALEAFQLLTKKEGIIPALESSHAVAYALKLAPKMKEDEGLVICLSGRGDKDVESIKRYME 395
BLAST of CX299781 vs. ExPASy Swiss-Prot
Match: TRPB_BACC3 (Tryptophan synthase beta chain OS=Bacillus cereus (strain 03BB102) GN=trpB PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 2.299e-36 Identity = 71/115 (61.74%), Postives = 93/115 (80.87%), Query Frame = 1 Query: 1 GVLHGALSYLLQDEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYLQ 345 GVLHG++ YLLQ+E+GQI E HSISAGLDYPGVGPEHS LKD GR Y+++TDDEALEAF+ ++ EGIIPALE++HA+AY KL P + + +V+ SGRGDKDV++ +Y++ Sbjct: 281 GVLHGSMMYLLQNEEGQIQEAHSISAGLDYPGVGPEHSLLKDIGRVSYHSITDDEALEAFQLLTKKEGIIPALESSHAVAYALKLAPQMKEDEGLVICLSGRGDKDVESIKRYME 395
BLAST of CX299781 vs. ExPASy Swiss-Prot
Match: TRPB_BACAN (Tryptophan synthase beta chain OS=Bacillus anthracis GN=trpB PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 2.299e-36 Identity = 71/115 (61.74%), Postives = 93/115 (80.87%), Query Frame = 1 Query: 1 GVLHGALSYLLQDEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYLQ 345 GVLHG++ YLLQ+E+GQI E HSISAGLDYPGVGPEHS LKD GR Y+++TDDEALEAF+ ++ EGIIPALE++HA+AY KL P + + +V+ SGRGDKDV++ +Y++ Sbjct: 281 GVLHGSMMYLLQNEEGQIQEAHSISAGLDYPGVGPEHSLLKDIGRVSYHSITDDEALEAFQLLTKKEGIIPALESSHAVAYALKLAPQMKEDEGLVICLSGRGDKDVESIKRYME 395
BLAST of CX299781 vs. ExPASy Swiss-Prot
Match: TRPB_BACAH (Tryptophan synthase beta chain OS=Bacillus thuringiensis (strain Al Hakam) GN=trpB PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 2.299e-36 Identity = 71/115 (61.74%), Postives = 93/115 (80.87%), Query Frame = 1 Query: 1 GVLHGALSYLLQDEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYLQ 345 GVLHG++ YLLQ+E+GQI E HSISAGLDYPGVGPEHS LKD GR Y+++TDDEALEAF+ ++ EGIIPALE++HA+AY KL P + + +V+ SGRGDKDV++ +Y++ Sbjct: 281 GVLHGSMMYLLQNEEGQIQEAHSISAGLDYPGVGPEHSLLKDIGRVSYHSITDDEALEAFQLLTKKEGIIPALESSHAVAYALKLAPQMKEDEGLVICLSGRGDKDVESIKRYME 395
BLAST of CX299781 vs. ExPASy Swiss-Prot
Match: TRPB_BACAC (Tryptophan synthase beta chain OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=trpB PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 2.299e-36 Identity = 71/115 (61.74%), Postives = 93/115 (80.87%), Query Frame = 1 Query: 1 GVLHGALSYLLQDEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYLQ 345 GVLHG++ YLLQ+E+GQI E HSISAGLDYPGVGPEHS LKD GR Y+++TDDEALEAF+ ++ EGIIPALE++HA+AY KL P + + +V+ SGRGDKDV++ +Y++ Sbjct: 281 GVLHGSMMYLLQNEEGQIQEAHSISAGLDYPGVGPEHSLLKDIGRVSYHSITDDEALEAFQLLTKKEGIIPALESSHAVAYALKLAPQMKEDEGLVICLSGRGDKDVESIKRYME 395
BLAST of CX299781 vs. ExPASy Swiss-Prot
Match: TRPB_BACAA (Tryptophan synthase beta chain OS=Bacillus anthracis (strain A0248) GN=trpB PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 2.299e-36 Identity = 71/115 (61.74%), Postives = 93/115 (80.87%), Query Frame = 1 Query: 1 GVLHGALSYLLQDEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRAEYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYLQ 345 GVLHG++ YLLQ+E+GQI E HSISAGLDYPGVGPEHS LKD GR Y+++TDDEALEAF+ ++ EGIIPALE++HA+AY KL P + + +V+ SGRGDKDV++ +Y++ Sbjct: 281 GVLHGSMMYLLQNEEGQIQEAHSISAGLDYPGVGPEHSLLKDIGRVSYHSITDDEALEAFQLLTKKEGIIPALESSHAVAYALKLAPQMKEDEGLVICLSGRGDKDVESIKRYME 395 The following BLAST results are available for this feature:
BLAST of CX299781 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 427
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299781 ID=CX299781; Name=CX299781; organism=Citrus clementina; type=EST; length=512bpback to top |