CX299786

Overview
NameCX299786
Unique NameCX299786
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length541
Libraries
Library NameType
NTLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX299786 vs. ExPASy Swiss-Prot
Match: SAHH_BACTN (Adenosylhomocysteinase OS=Bacteroides thetaiotaomicron GN=ahcY PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 9.817e-44
Identity = 91/150 (60.67%), Postives = 109/150 (72.67%), Query Frame = 3
Query:    3 MKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTG*Y*KKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 452
            M+KMK+ AIVCNIGHFDNEI V  L+ Y G+K + IKPQ DR+ FP+ +S I++LA+GRL+NLGCATGHPSFVMS SFTNQ +AQ+EL+ +K    Y   VY LPKHLDE+V            T+LT EQA YI VS DGPYK  HYRY
Sbjct:  332 MEKMKDQAIVCNIGHFDNEIQVDALKHYSGIKCVNIKPQVDRYYFPDGHS-ILLLADGRLVNLGCATGHPSFVMSNSFTNQTLAQIELFNKK----YEVNVYRLPKHLDEEVARLHLEKIGVKLTKLTPEQAAYIGVSVDGPYKAEHYRY 476          
BLAST of CX299786 vs. ExPASy Swiss-Prot
Match: SAHH_NOCFA (Adenosylhomocysteinase OS=Nocardia farcinica GN=ahcY PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 1.282e-43
Identity = 91/150 (60.67%), Postives = 106/150 (70.67%), Query Frame = 3
Query:    3 MKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTG*Y*KKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 452
            MK MK+ AI+ NIGHFDNEID+  LE   G  R+TIKPQ D W F E+   IIVL+EGRL+NLG ATGHPSFVMS SF+NQVIAQ+ELW +     Y  +VY LPKHLDEKV            T+LTK+QA+YI V  +GPYKP HYRY
Sbjct:  348 MKAMKDQAILGNIGHFDNEIDMAALER-SGATRLTIKPQVDLWTFGESGKSIIVLSEGRLLNLGNATGHPSFVMSNSFSNQVIAQIELWTKPEE--YDNEVYRLPKHLDEKVARIHVEALGGTLTKLTKDQAEYIGVDVEGPYKPEHYRY 494          
BLAST of CX299786 vs. ExPASy Swiss-Prot
Match: SAHH_CHLCH (Adenosylhomocysteinase OS=Chlorobium chlorochromatii (strain CaD3) GN=ahcY PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 1.282e-43
Identity = 92/150 (61.33%), Postives = 108/150 (72.00%), Query Frame = 3
Query:    3 MKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTG*Y*KKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 452
            MK+M++ AIVCNIGHFDNEI V  L   P VK I IKPQ D+++FP  N  + +LAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+ELW+++    Y   VY LPK LDE+V            TRLT EQA+YI VSADGPYKP HYRY
Sbjct:  327 MKQMRDEAIVCNIGHFDNEIQVDKLNNDPTVKIINIKPQVDKYIFPNGNC-MYLLAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIELWQKE----YAVDVYRLPKALDEEVARLHLEQIGVRLTRLTPEQAEYIGVSADGPYKPEHYRY 471          
BLAST of CX299786 vs. ExPASy Swiss-Prot
Match: SAHH_DESVM (Adenosylhomocysteinase OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=ahcY PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 4.872e-43
Identity = 92/150 (61.33%), Postives = 103/150 (68.67%), Query Frame = 3
Query:    3 MKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTG*Y*KKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 452
            M+ MK+ AIVCNIGHFDNEID+  LET PG   + IKPQ D+W      S IIVLAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+EL          +KVY+LPK LDE+V            T LTKEQADYI V  DGPYKP HYRY
Sbjct:  334 MEAMKDEAIVCNIGHFDNEIDMHYLETTPGCTCLNIKPQVDKWTLKSGRS-IIVLAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIELATNPDLE---RKVYILPKKLDEQVARLHLARLGVTLTTLTKEQADYIGVPVDGPYKPGHYRY 479          
BLAST of CX299786 vs. ExPASy Swiss-Prot
Match: SAHH_MYCTU (Adenosylhomocysteinase OS=Mycobacterium tuberculosis GN=ahcY PE=1 SV=2)

HSP 1 Score: 173.326 bits (438), Expect = 6.363e-43
Identity = 88/150 (58.67%), Postives = 105/150 (70.00%), Query Frame = 3
Query:    3 MKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTG*Y*KKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 452
            +K MK++AI+ NIGHFDNEID+ GLE   G  R+ +KPQ D W F +T   IIVL+EGRL+NLG ATGHPSFVMS SF NQ IAQ+ELW +     Y  +VY LPKHLDEKV            T+LTKEQA+Y+ V  +GPYKP HYRY
Sbjct:  349 IKAMKDHAILGNIGHFDNEIDMAGLER-SGATRVNVKPQVDLWTFGDTGRSIIVLSEGRLLNLGNATGHPSFVMSNSFANQTIAQIELWTKNDE--YDNEVYRLPKHLDEKVARIHVEALGGHLTKLTKEQAEYLGVDVEGPYKPDHYRY 495          
BLAST of CX299786 vs. ExPASy Swiss-Prot
Match: SAHH_MYCTA (Adenosylhomocysteinase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=ahcY PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 6.363e-43
Identity = 88/150 (58.67%), Postives = 105/150 (70.00%), Query Frame = 3
Query:    3 MKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTG*Y*KKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 452
            +K MK++AI+ NIGHFDNEID+ GLE   G  R+ +KPQ D W F +T   IIVL+EGRL+NLG ATGHPSFVMS SF NQ IAQ+ELW +     Y  +VY LPKHLDEKV            T+LTKEQA+Y+ V  +GPYKP HYRY
Sbjct:  349 IKAMKDHAILGNIGHFDNEIDMAGLER-SGATRVNVKPQVDLWTFGDTGRSIIVLSEGRLLNLGNATGHPSFVMSNSFANQTIAQIELWTKNDE--YDNEVYRLPKHLDEKVARIHVEALGGHLTKLTKEQAEYLGVDVEGPYKPDHYRY 495          
BLAST of CX299786 vs. ExPASy Swiss-Prot
Match: SAHH_MYCBT (Adenosylhomocysteinase OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=ahcY PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 6.363e-43
Identity = 88/150 (58.67%), Postives = 105/150 (70.00%), Query Frame = 3
Query:    3 MKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTG*Y*KKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 452
            +K MK++AI+ NIGHFDNEID+ GLE   G  R+ +KPQ D W F +T   IIVL+EGRL+NLG ATGHPSFVMS SF NQ IAQ+ELW +     Y  +VY LPKHLDEKV            T+LTKEQA+Y+ V  +GPYKP HYRY
Sbjct:  349 IKAMKDHAILGNIGHFDNEIDMAGLER-SGATRVNVKPQVDLWTFGDTGRSIIVLSEGRLLNLGNATGHPSFVMSNSFANQTIAQIELWTKNDE--YDNEVYRLPKHLDEKVARIHVEALGGHLTKLTKEQAEYLGVDVEGPYKPDHYRY 495          
BLAST of CX299786 vs. ExPASy Swiss-Prot
Match: SAHH_MYCBP (Adenosylhomocysteinase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=ahcY PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 6.363e-43
Identity = 88/150 (58.67%), Postives = 105/150 (70.00%), Query Frame = 3
Query:    3 MKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTG*Y*KKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 452
            +K MK++AI+ NIGHFDNEID+ GLE   G  R+ +KPQ D W F +T   IIVL+EGRL+NLG ATGHPSFVMS SF NQ IAQ+ELW +     Y  +VY LPKHLDEKV            T+LTKEQA+Y+ V  +GPYKP HYRY
Sbjct:  349 IKAMKDHAILGNIGHFDNEIDMAGLER-SGATRVNVKPQVDLWTFGDTGRSIIVLSEGRLLNLGNATGHPSFVMSNSFANQTIAQIELWTKNDE--YDNEVYRLPKHLDEKVARIHVEALGGHLTKLTKEQAEYLGVDVEGPYKPDHYRY 495          
BLAST of CX299786 vs. ExPASy Swiss-Prot
Match: SAHH_MYCBO (Adenosylhomocysteinase OS=Mycobacterium bovis GN=ahcY PE=1 SV=3)

HSP 1 Score: 173.326 bits (438), Expect = 6.363e-43
Identity = 88/150 (58.67%), Postives = 105/150 (70.00%), Query Frame = 3
Query:    3 MKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTG*Y*KKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 452
            +K MK++AI+ NIGHFDNEID+ GLE   G  R+ +KPQ D W F +T   IIVL+EGRL+NLG ATGHPSFVMS SF NQ IAQ+ELW +     Y  +VY LPKHLDEKV            T+LTKEQA+Y+ V  +GPYKP HYRY
Sbjct:  349 IKAMKDHAILGNIGHFDNEIDMAGLER-SGATRVNVKPQVDLWTFGDTGRSIIVLSEGRLLNLGNATGHPSFVMSNSFANQTIAQIELWTKNDE--YDNEVYRLPKHLDEKVARIHVEALGGHLTKLTKEQAEYLGVDVEGPYKPDHYRY 495          
BLAST of CX299786 vs. ExPASy Swiss-Prot
Match: SAHH_PROMP (Adenosylhomocysteinase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=ahcY PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 1.418e-42
Identity = 92/148 (62.16%), Postives = 105/148 (70.95%), Query Frame = 3
Query:    9 KMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTG*Y*KKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 452
            KMK+ AIVCNIGHFDNEIDV  L+ YP      IKPQ D    P  N  II+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+ +     Y K+VYVLPKHLDE V            T+LTK+QADYI+VS +GPYKP  YRY
Sbjct:  331 KMKDEAIVCNIGHFDNEIDVASLKDYPWEN---IKPQVDHITLPSGNK-IILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFNKSDE--YSKEVYVLPKHLDEMVARLHLDKIGAKLTKLTKDQADYINVSVEGPYKPEQYRY 472          
The following BLAST results are available for this feature:
BLAST of CX299786 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 234
Match NameE-valueIdentityDescription
SAHH_BACTN9.817e-4460.67Adenosylhomocysteinase OS=Bacteroides thetaiotaomi... [more]
SAHH_NOCFA1.282e-4360.67Adenosylhomocysteinase OS=Nocardia farcinica GN=ah... [more]
SAHH_CHLCH1.282e-4361.33Adenosylhomocysteinase OS=Chlorobium chlorochromat... [more]
SAHH_DESVM4.872e-4361.33Adenosylhomocysteinase OS=Desulfovibrio vulgaris (... [more]
SAHH_MYCTU6.363e-4358.67Adenosylhomocysteinase OS=Mycobacterium tuberculos... [more]
SAHH_MYCTA6.363e-4358.67Adenosylhomocysteinase OS=Mycobacterium tuberculos... [more]
SAHH_MYCBT6.363e-4358.67Adenosylhomocysteinase OS=Mycobacterium bovis (str... [more]
SAHH_MYCBP6.363e-4358.67Adenosylhomocysteinase OS=Mycobacterium bovis (str... [more]
SAHH_MYCBO6.363e-4358.67Adenosylhomocysteinase OS=Mycobacterium bovis GN=a... [more]
SAHH_PROMP1.418e-4262.16Adenosylhomocysteinase OS=Prochlorococcus marinus ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC07002D10SK NTLeaf1 Citrus clementina cDNA clone C07002D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX299786 ID=CX299786; Name=CX299786; organism=Citrus clementina; type=EST; length=541bp
ACATGAAGAAGATGAAGAACAATGCAATTGTTTGCAACATTGGTCACTTT
GATAATGAAATTGATGTGCTCGGTCTTGAGACCTACCCGGGTGTTAAGCG
CATTACCATCAAGCCCCAAACTGATAGGTGGGTCTTCCCCGAGACCAACT
CAGGCATCATCGTGTTGGCTGAGGGACGTCTCATGAACTTGGGATGTGCC
ACTGGGCACCCCAGCTTTGTGATGTCCTGTTCCTTCACCAATCAGGTGAT
TGCCCAGCTTGAGCTCTGGAAGGAGAAGAGCACCGGCTAGTACTAGAAGA
AGGTGTATGTTCTGCCCAAGCACCTCGATGAGAAGGTTGCTGCTCTTCAC
CTTGGCAAACTTGGAGCTAAGCTCACCAGGCTCACCAAGGAGCAGGCTGA
CTACATCAGTGTGTCCGCCGATGGTCCTTACAAGCCTCTTCACTACAGGT
ACTAAGTGGAAGAAGAAGAAGAAGAATAGTGAATGTTTTGAGGGAAAGAA
ACAAAATATTTGGCCGGCTTGATTGTTTTCAATGATGATCT
back to top