CX299786

Overview
NameCX299786
Unique NameCX299786
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length541
Libraries
Library NameType
NTLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX299786 vs. ExPASy Swiss-Prot
Match: SAHH_RALEH (Adenosylhomocysteinase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=ahcY PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 2.047e-41
Identity = 86/150 (57.33%), Postives = 103/150 (68.67%), Query Frame = 3
Query:    3 MKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTG*Y*KKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 452
            M KMK+ AIVCNIGHFDNEID+  +E Y   +   IKPQ D   FP+    +I+LA+GRL+NLGCATGHPS+VMS SF NQ IAQ+ELW+E+ +G Y   VY LPKHLDEKV            T LT++QA YI V  +GPYK  HYRY
Sbjct:  327 MAKMKDQAIVCNIGHFDNEIDIASIEKYEWDE---IKPQVDHVKFPDGKK-LIILAKGRLVNLGCATGHPSYVMSSSFANQTIAQIELWQERDSGKYPVGVYTLPKHLDEKVARLQLRKLNAQLTELTEQQAAYIGVKKEGPYKADHYRY 472          
BLAST of CX299786 vs. ExPASy Swiss-Prot
Match: SAHH_PROM0 (Adenosylhomocysteinase OS=Prochlorococcus marinus (strain MIT 9301) GN=ahcY PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 2.047e-41
Identity = 92/148 (62.16%), Postives = 103/148 (69.59%), Query Frame = 3
Query:    9 KMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTG*Y*KKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 452
            KMK+ AIVCNIGHFDNEIDV  L+ Y       IKPQ D    P  N  II+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+ +     Y K+VYVLPKHLDE V            T+LTKEQADYISVS +GPYK   YRY
Sbjct:  331 KMKDEAIVCNIGHFDNEIDVASLKNYQWEN---IKPQVDHITLPSGNK-IILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFNKSEQ--YAKEVYVLPKHLDEMVARLHLDKIGAKLTKLTKEQADYISVSVEGPYKSEFYRY 472          
BLAST of CX299786 vs. ExPASy Swiss-Prot
Match: SAHH_PELPB (Adenosylhomocysteinase OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 2.047e-41
Identity = 90/151 (59.60%), Postives = 104/151 (68.87%), Query Frame = 3
Query:    3 MKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW-KEKSTG*Y*KKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 452
            MK+MK+ AIVCNIGHFDNEI V  L  Y G  R+ IKPQ D++ F E  + I +LAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+ELW K+ + G     VY LPK LDE+V            TRL+ EQA YI V  DGPYKP HYRY
Sbjct:  327 MKQMKDEAIVCNIGHFDNEIQVEQLYAYAGATRLNIKPQVDKYTF-ENGNCIYLLAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIELWTKDYAVG-----VYRLPKELDEEVARLHLEQLGVKLTRLSDEQAAYIGVPLDGPYKPEHYRY 471          
BLAST of CX299786 vs. ExPASy Swiss-Prot
Match: SAHH_MYCSJ (Adenosylhomocysteinase OS=Mycobacterium sp. (strain JLS) GN=ahcY PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 2.047e-41
Identity = 90/150 (60.00%), Postives = 105/150 (70.00%), Query Frame = 3
Query:    3 MKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTG*Y*KKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 452
            MK MK+ AI+ NIGHFDNEID+  LE   G  RI IKPQ D W F + +S I+VL+EGRL+NLG ATGHPSFVMS SF+NQVIAQ+ELW +     Y   VY L KHLDEKV            T+LTKEQA+YI+V  +GPYKP HYRY
Sbjct:  344 MKAMKDKAILGNIGHFDNEIDMAALER-SGATRINIKPQVDEWTFDDGHS-IVVLSEGRLLNLGNATGHPSFVMSNSFSNQVIAQIELWTKNDE--YDNAVYRLAKHLDEKVARIHVEALGGTLTKLTKEQAEYINVDVEGPYKPEHYRY 489          
BLAST of CX299786 vs. ExPASy Swiss-Prot
Match: SAHH_CHRVO (Adenosylhomocysteinase OS=Chromobacterium violaceum GN=ahcY PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 2.047e-41
Identity = 90/150 (60.00%), Postives = 104/150 (69.33%), Query Frame = 3
Query:    3 MKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTG*Y*KKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 452
            MKKM+NNAI+CNIGHFD+EI+V  L  Y       IKPQ D  +FP+    +I+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+       Y KKVYVLPKHLDEKV            T L+ +QA YISV   GPYKP HYRY
Sbjct:  323 MKKMRNNAIICNIGHFDSEIEVASLRQYQWEN---IKPQVDHIIFPD-GKRVILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFANGHK--YEKKVYVLPKHLDEKVARLHLARIGARLTELSDQQAAYISVPKQGPYKPDHYRY 466          
BLAST of CX299786 vs. ExPASy Swiss-Prot
Match: SAHH_RALEJ (Adenosylhomocysteinase OS=Ralstonia eutropha (strain JMP134) GN=ahcY PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 2.673e-41
Identity = 86/150 (57.33%), Postives = 103/150 (68.67%), Query Frame = 3
Query:    3 MKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTG*Y*KKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 452
            M +MK+ AIVCNIGHFDNEID+  +E Y   +   IKPQ D   FP+    II+LA+GRL+NLGCATGHPS+VMS SF NQ IAQ+ELW+E+ +G Y   VY LPKHLDEKV            T LT++QA YI V  +GPYK  HYRY
Sbjct:  327 MARMKDQAIVCNIGHFDNEIDIASIEKYEWDE---IKPQVDHVKFPDGKK-IIILAKGRLVNLGCATGHPSYVMSSSFANQTIAQIELWQERDSGKYPVGVYTLPKHLDEKVARLQLRKLNAQLTELTEQQAAYIGVKKEGPYKADHYRY 472          
BLAST of CX299786 vs. ExPASy Swiss-Prot
Match: SAHH_CHLL2 (Adenosylhomocysteinase OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=ahcY PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 2.673e-41
Identity = 85/150 (56.67%), Postives = 105/150 (70.00%), Query Frame = 3
Query:    3 MKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTG*Y*KKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 452
            MK+M++ AIVCNIGHFDNEI V  L ++ G  ++ IKPQ D++ F   NS I +LAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+ELW ++    Y   VY LPK LDE+V            T L+KEQADY+ +  +GPYKP HYRY
Sbjct:  327 MKQMRDEAIVCNIGHFDNEIQVEQLNSFAGATKLNIKPQVDKYTFESGNS-IYLLAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIELWTKE----YSIDVYRLPKELDEEVARLHLGQLGVKLTTLSKEQADYLGIPVEGPYKPDHYRY 471          
BLAST of CX299786 vs. ExPASy Swiss-Prot
Match: SAHH_HALHL (Adenosylhomocysteinase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 3.492e-41
Identity = 93/150 (62.00%), Postives = 105/150 (70.00%), Query Frame = 3
Query:    3 MKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTG*Y*KKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 452
            MK MK+ AIVCNIGHFDNEIDV  L+ Y   K   IKPQ D   FP+    I +LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+   + G Y K VYVLPKHLDEKV            TRL++EQA YI VS DGP+KP  YRY
Sbjct:  287 MKAMKDEAIVCNIGHFDNEIDVASLKQY---KWDEIKPQVDHVEFPDGKK-ITLLAEGRLVNLGCATGHPSFVMSNSFTNQVMAQMELY--NNPGKYEKDVYVLPKHLDEKVAALHLGRVGANLTRLSEEQAGYIGVSVDGPFKPEWYRY 430          
BLAST of CX299786 vs. ExPASy Swiss-Prot
Match: SAHH_CUPTR (Adenosylhomocysteinase OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=ahcY PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 3.492e-41
Identity = 86/150 (57.33%), Postives = 102/150 (68.00%), Query Frame = 3
Query:    3 MKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTG*Y*KKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 452
            M KMK+ AIVCNIGHFDNEID+  +E Y   +   IKPQ D   FP+    +I+LA+GRL+NLGCATGHPS+VMS SF NQ IAQ+ELW+E+ +G Y   VY LPKHLDEKV            T LT +QA YI V  +GPYK  HYRY
Sbjct:  327 MAKMKDQAIVCNIGHFDNEIDIASIEKYEWDE---IKPQVDHVKFPDGKK-LIILAKGRLVNLGCATGHPSYVMSSSFANQTIAQIELWQERDSGKYPVGVYTLPKHLDEKVARLQLRKLNAQLTELTDQQAAYIGVKKEGPYKADHYRY 472          
BLAST of CX299786 vs. ExPASy Swiss-Prot
Match: SAHH_SYNPX (Adenosylhomocysteinase OS=Synechococcus sp. (strain WH8102) GN=ahcY PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 4.560e-41
Identity = 90/150 (60.00%), Postives = 107/150 (71.33%), Query Frame = 3
Query:    3 MKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTG*Y*KKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 452
            ++KMK+ AIVCNIGHFDNEIDV  L+ Y   +   IKPQ D    P  N  II+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+ + +   Y K+VYVLPKHLDE V            T L+K+QADYI+V  +GPYKP HYRY
Sbjct:  333 LEKMKDEAIVCNIGHFDNEIDVASLKGY---EWDNIKPQVDHITLPSGNR-IILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFTKGNE--YGKEVYVLPKHLDEMVARLHLDRIGAKLTELSKDQADYINVPVEGPYKPDHYRY 476          
The following BLAST results are available for this feature:
BLAST of CX299786 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 234
Match NameE-valueIdentityDescription
SAHH_RALEH2.047e-4157.33Adenosylhomocysteinase OS=Ralstonia eutropha (stra... [more]
SAHH_PROM02.047e-4162.16Adenosylhomocysteinase OS=Prochlorococcus marinus ... [more]
SAHH_PELPB2.047e-4159.60Adenosylhomocysteinase OS=Pelodictyon phaeoclathra... [more]
SAHH_MYCSJ2.047e-4160.00Adenosylhomocysteinase OS=Mycobacterium sp. (strai... [more]
SAHH_CHRVO2.047e-4160.00Adenosylhomocysteinase OS=Chromobacterium violaceu... [more]
SAHH_RALEJ2.673e-4157.33Adenosylhomocysteinase OS=Ralstonia eutropha (stra... [more]
SAHH_CHLL22.673e-4156.67Adenosylhomocysteinase OS=Chlorobium limicola (str... [more]
SAHH_HALHL3.492e-4162.00Adenosylhomocysteinase OS=Halorhodospira halophila... [more]
SAHH_CUPTR3.492e-4157.33Adenosylhomocysteinase OS=Cupriavidus taiwanensis ... [more]
SAHH_SYNPX4.560e-4160.00Adenosylhomocysteinase OS=Synechococcus sp. (strai... [more]

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Properties
Property NameValue
Genbank descriptionC07002D10SK NTLeaf1 Citrus clementina cDNA clone C07002D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX299786 ID=CX299786; Name=CX299786; organism=Citrus clementina; type=EST; length=541bp
ACATGAAGAAGATGAAGAACAATGCAATTGTTTGCAACATTGGTCACTTT
GATAATGAAATTGATGTGCTCGGTCTTGAGACCTACCCGGGTGTTAAGCG
CATTACCATCAAGCCCCAAACTGATAGGTGGGTCTTCCCCGAGACCAACT
CAGGCATCATCGTGTTGGCTGAGGGACGTCTCATGAACTTGGGATGTGCC
ACTGGGCACCCCAGCTTTGTGATGTCCTGTTCCTTCACCAATCAGGTGAT
TGCCCAGCTTGAGCTCTGGAAGGAGAAGAGCACCGGCTAGTACTAGAAGA
AGGTGTATGTTCTGCCCAAGCACCTCGATGAGAAGGTTGCTGCTCTTCAC
CTTGGCAAACTTGGAGCTAAGCTCACCAGGCTCACCAAGGAGCAGGCTGA
CTACATCAGTGTGTCCGCCGATGGTCCTTACAAGCCTCTTCACTACAGGT
ACTAAGTGGAAGAAGAAGAAGAAGAATAGTGAATGTTTTGAGGGAAAGAA
ACAAAATATTTGGCCGGCTTGATTGTTTTCAATGATGATCT
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