CX299925

Overview
NameCX299925
Unique NameCX299925
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length522
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX299925 vs. ExPASy Swiss-Prot
Match: CATA3_SOYBN (Catalase-3 OS=Glycine max GN=CAT3 PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 1.411e-44
Identity = 80/103 (77.67%), Postives = 90/103 (87.38%), Query Frame = 3
Query:    3 IDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 311
            ++YFPSRYDPVRHAE  P PP   GG+REKC+I KENNFKQPGERYRSW  DRQERF+ RWVDALSDPRVTHEIR IWISYWSQA +SLGQK+AS LN++P+I
Sbjct:  390 VNYFPSRYDPVRHAERVPVPPRTLGGKREKCMIEKENNFKQPGERYRSWPSDRQERFVRRWVDALSDPRVTHEIRSIWISYWSQADRSLGQKIASHLNLKPSI 492          
BLAST of CX299925 vs. ExPASy Swiss-Prot
Match: CATA2_RICCO (Catalase isozyme 2 OS=Ricinus communis GN=CAT2 PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 2.406e-44
Identity = 79/103 (76.70%), Postives = 91/103 (88.35%), Query Frame = 3
Query:    3 IDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 311
            +DYF SRYDPVRHAE  P P  IC GRREKC+I KE+NF+QPG+RYRSWAPDRQERF+CR V+ALS+PR+THEIR IW+S+W+Q  KSLGQKLASRLNVRPNI
Sbjct:  390 VDYFQSRYDPVRHAEKVPIPNAICSGRREKCVIEKEDNFRQPGDRYRSWAPDRQERFLCRLVNALSEPRITHEIRSIWVSWWTQCDKSLGQKLASRLNVRPNI 492          
BLAST of CX299925 vs. ExPASy Swiss-Prot
Match: CATA_PHAAU (Catalase OS=Phaseolus aureus PE=2 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 7.001e-44
Identity = 80/103 (77.67%), Postives = 89/103 (86.41%), Query Frame = 3
Query:    3 IDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 311
            ++YFPSRYDPVRHAE  P PP +  GRREK  I KENNFKQ GER+RSWAPDRQ+RFI RWVDALSDPRVTHEIR +WISYWSQA +SLGQK+AS LN+RPNI
Sbjct:  390 VNYFPSRYDPVRHAEKFPIPPAVFSGRREKIAIEKENNFKQAGERFRSWAPDRQDRFIRRWVDALSDPRVTHEIRSVWISYWSQADRSLGQKIASHLNMRPNI 492          
BLAST of CX299925 vs. ExPASy Swiss-Prot
Match: CATA1_ARATH (Catalase-1 OS=Arabidopsis thaliana GN=CAT1 PE=1 SV=3)

HSP 1 Score: 174.866 bits (442), Expect = 2.037e-43
Identity = 80/102 (78.43%), Postives = 89/102 (87.25%), Query Frame = 3
Query:    3 IDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPN 308
            ++YFPSR DPVRHAE +PT P +C G REKC I KENNFKQPGERYRSW  DRQERF+ R+V+ALS+PRVTHEIR IWISYWSQA KSLGQKLA+RLNVRPN
Sbjct:  390 VNYFPSRLDPVRHAEKYPTTPIVCSGNREKCFIGKENNFKQPGERYRSWDSDRQERFVKRFVEALSEPRVTHEIRSIWISYWSQADKSLGQKLATRLNVRPN 491          
BLAST of CX299925 vs. ExPASy Swiss-Prot
Match: CATA_HELAN (Catalase OS=Helianthus annuus PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 1.724e-42
Identity = 78/102 (76.47%), Postives = 88/102 (86.27%), Query Frame = 3
Query:    3 IDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPN 308
            IDYFPSRYDP RHAE +P PP    G+R+KC+I KENNFKQPGERYRS++PDRQERFI R V  LSDPRVTHE+R IW+SYWSQA KSLGQK+ASRLNV+PN
Sbjct:  390 IDYFPSRYDPARHAEQYPIPPVRLSGKRDKCVIEKENNFKQPGERYRSFSPDRQERFINRVVGGLSDPRVTHEVRSIWVSYWSQADKSLGQKIASRLNVKPN 491          
BLAST of CX299925 vs. ExPASy Swiss-Prot
Match: CATA3_CUCPE (Catalase isozyme 3 OS=Cucurbita pepo GN=CAT3 PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 2.941e-42
Identity = 77/104 (74.04%), Postives = 92/104 (88.46%), Query Frame = 3
Query:    3 IDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENN-FKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 311
            ++YFPSRYDP RHAE  P PP +  G+RE+C+IPKENN FKQ G+RYRSWAPDRQ+RF+ R+V+ALSDPRVT E+R+IWISYWSQA +SLGQK+ASRLNVRPNI
Sbjct:  389 VNYFPSRYDPCRHAEKFPMPPNVLTGKRERCVIPKENNNFKQAGDRYRSWAPDRQDRFVKRFVEALSDPRVTDEVRNIWISYWSQADRSLGQKIASRLNVRPNI 492          
BLAST of CX299925 vs. ExPASy Swiss-Prot
Match: CATA_AVIMR (Catalase OS=Avicennia marina PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 4.247e-41
Identity = 75/103 (72.82%), Postives = 87/103 (84.47%), Query Frame = 3
Query:    3 IDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 311
            +DYFPS+YDP RHAE HP P  +  GRR++ +I KE+NFKQ G+RYRSWAPDRQERF+ RWVDALSDPR+T EIR IW+SYWSQA KS GQKLASRLNVRP +
Sbjct:  390 VDYFPSKYDPTRHAERHPIPNAVITGRRDRRVIEKEDNFKQAGDRYRSWAPDRQERFLRRWVDALSDPRLTLEIRSIWVSYWSQADKSFGQKLASRLNVRPTM 492          
BLAST of CX299925 vs. ExPASy Swiss-Prot
Match: CATA1_RICCO (Catalase isozyme 1 OS=Ricinus communis GN=CAT1 PE=2 SV=2)

HSP 1 Score: 166.392 bits (420), Expect = 7.245e-41
Identity = 75/103 (72.82%), Postives = 86/103 (83.50%), Query Frame = 3
Query:    3 IDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 311
            ++YFPSR DP R+AE  P P  IC G+REKC+I KENNFKQPGERYRSWAPDRQERF+ R V  LSDPR+THE+R IWISYW Q  KSLGQKLA+RLNV+P+I
Sbjct:  390 VNYFPSRCDPARNAESFPVPSAICSGKREKCVIEKENNFKQPGERYRSWAPDRQERFLNRLVGGLSDPRITHELRTIWISYWIQCDKSLGQKLATRLNVKPSI 492          
BLAST of CX299925 vs. ExPASy Swiss-Prot
Match: CATA2_CUCPE (Catalase isozyme 2 OS=Cucurbita pepo GN=CAT2 PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 1.236e-40
Identity = 72/104 (69.23%), Postives = 91/104 (87.50%), Query Frame = 3
Query:    3 IDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKEN-NFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 311
            ++YFPSRYD  RHAE +P PP +  G+RE+C+IPKEN NFKQ G+RYRSWAPDRQERF+ R+V+ALSD +VTHE+R+IWISYW+QA +SLGQK+ASR+N RPN+
Sbjct:  389 VNYFPSRYDACRHAEKYPMPPNVLSGKRERCVIPKENHNFKQAGDRYRSWAPDRQERFVNRFVEALSDSKVTHEVRNIWISYWTQADRSLGQKIASRMNARPNM 492          
BLAST of CX299925 vs. ExPASy Swiss-Prot
Match: CATA3_ARATH (Catalase-3 OS=Arabidopsis thaliana GN=CAT3 PE=1 SV=3)

HSP 1 Score: 160.614 bits (405), Expect = 3.975e-39
Identity = 74/103 (71.84%), Postives = 87/103 (84.47%), Query Frame = 3
Query:    3 IDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 311
            I+Y+PS++DPVR AE  PTP     G R KC+I KENNFKQ G+RYRSWAPDRQ+RF+ RWV+ LS+PR+THEIR IWISYWSQA +SLGQKLASRLNVRP+I
Sbjct:  390 INYYPSKFDPVRCAEKVPTPTNSYTGIRTKCVIKKENNFKQAGDRYRSWAPDRQDRFVKRWVEILSEPRLTHEIRGIWISYWSQADRSLGQKLASRLNVRPSI 492          
The following BLAST results are available for this feature:
BLAST of CX299925 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
CATA3_SOYBN1.411e-4477.67Catalase-3 OS=Glycine max GN=CAT3 PE=2 SV=1[more]
CATA2_RICCO2.406e-4476.70Catalase isozyme 2 OS=Ricinus communis GN=CAT2 PE=... [more]
CATA_PHAAU7.001e-4477.67Catalase OS=Phaseolus aureus PE=2 SV=1[more]
CATA1_ARATH2.037e-4378.43Catalase-1 OS=Arabidopsis thaliana GN=CAT1 PE=1 SV... [more]
CATA_HELAN1.724e-4276.47Catalase OS=Helianthus annuus PE=2 SV=1[more]
CATA3_CUCPE2.941e-4274.04Catalase isozyme 3 OS=Cucurbita pepo GN=CAT3 PE=2 ... [more]
CATA_AVIMR4.247e-4172.82Catalase OS=Avicennia marina PE=2 SV=1[more]
CATA1_RICCO7.245e-4172.82Catalase isozyme 1 OS=Ricinus communis GN=CAT1 PE=... [more]
CATA2_CUCPE1.236e-4069.23Catalase isozyme 2 OS=Cucurbita pepo GN=CAT2 PE=2 ... [more]
CATA3_ARATH3.975e-3971.84Catalase-3 OS=Arabidopsis thaliana GN=CAT3 PE=1 SV... [more]

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Properties
Property NameValue
Genbank descriptionC07004A12SK SaltLeaf1 Citrus clementina cDNA clone C07004A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX299925 ID=CX299925; Name=CX299925; organism=Citrus clementina; type=EST; length=522bp
AGATCGATTACTTCCCTTCAAGGTATGATCCTGTCCGTCATGCTGAGATG
CATCCAACTCCTCCTGAAATCTGCGGCGGAAGGCGCGAGAAGTGCATAAT
TCCAAAGGAAAACAACTTCAAACAACCTGGAGAGAGATACCGATCTTGGG
CACCAGACAGGCAAGAGCGATTCATCTGCAGATGGGTTGATGCTTTATCT
GATCCACGCGTCACCCATGAGATCCGCCACATATGGATCTCATACTGGTC
TCAGGCTTGCAAGTCTCTGGGTCAGAAGTTGGCATCTCGTCTGAATGTGA
GGCCTAACATTTAATGGTGATGCGGAGCTGAGTGATTTAGAAAGAGTTAG
CAAGGAGTAAACACAGAGGACGTCAGCAGTTTAAGGAATGCGAATTCGTT
TTCGGGTGGTGTGTTATTTTGTAATACTAAAAAAAACATGTTGGTCCTGT
AATTCATAAACATGATGTTCCTTAAAATAAATGCTGGTTGTACGCTCAAA
ATTTGTATAAAGTACAATCATA
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