CX299925

Overview
NameCX299925
Unique NameCX299925
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length522
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX299925 vs. ExPASy Swiss-Prot
Match: CATA1_SOLLC (Catalase isozyme 1 OS=Solanum lycopersicum GN=CAT1 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 1.279e-37
Identity = 70/103 (67.96%), Postives = 83/103 (80.58%), Query Frame = 3
Query:    3 IDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 311
            +DY PSR+DP R AE +P P  +  GRR  C+IPKENNFKQ GERYRSW PDRQ+R+I +WV++LSDPRVTHEIR IWISY SQA KS GQK+ASRL V+P +
Sbjct:  390 VDYLPSRFDPCRPAEQYPIPSCVLNGRRTNCVIPKENNFKQAGERYRSWEPDRQDRYINKWVESLSDPRVTHEIRSIWISYLSQADKSCGQKVASRLTVKPTM 492          
BLAST of CX299925 vs. ExPASy Swiss-Prot
Match: CATA1_TOBAC (Catalase isozyme 1 OS=Nicotiana tabacum GN=CAT-1 PE=1 SV=2)

HSP 1 Score: 154.836 bits (390), Expect = 2.181e-37
Identity = 68/103 (66.02%), Postives = 83/103 (80.58%), Query Frame = 3
Query:    3 IDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 311
            +DY PSR+DP RHAE +P P  +  GRRE C+I KENNFKQ GERYRSW PDRQ+R++ +WV+ LSDPRVT+EIR IWISY SQA KS GQK+ASRL ++P +
Sbjct:  390 VDYLPSRFDPCRHAEQYPIPSRVLTGRREMCVIEKENNFKQAGERYRSWEPDRQDRYVSKWVEHLSDPRVTYEIRSIWISYLSQADKSCGQKVASRLTLKPTM 492          
BLAST of CX299925 vs. ExPASy Swiss-Prot
Match: CATA2_MAIZE (Catalase isozyme 2 OS=Zea mays GN=CAT2 PE=2 SV=3)

HSP 1 Score: 154.066 bits (388), Expect = 3.721e-37
Identity = 72/103 (69.90%), Postives = 84/103 (81.55%), Query Frame = 3
Query:    3 IDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 311
            +DYFPSRYD VR+A  +P P     GRREK +I KENNFKQPGERYR+  P RQERFI RWVDALSDPR+THEIR IW+S WSQA +SLGQKLASRL+ +P++
Sbjct:  389 VDYFPSRYDAVRNAPRYPIPTAHIAGRREKTVISKENNFKQPGERYRAMDPARQERFITRWVDALSDPRLTHEIRTIWLSNWSQADRSLGQKLASRLSAKPSM 491          
BLAST of CX299925 vs. ExPASy Swiss-Prot
Match: CATA2_SOLTU (Catalase isozyme 2 OS=Solanum tuberosum GN=CAT2 PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 6.347e-37
Identity = 69/103 (66.99%), Postives = 82/103 (79.61%), Query Frame = 3
Query:    3 IDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 311
            +DY PSR+DP R AE +P P  +  GRR  C+IPKENNFKQ GERYRSW  DRQ+R+I +WV++LSDPRVTHEIR IWISY SQA KS GQK+ASRL V+P +
Sbjct:  390 VDYLPSRFDPCRPAEQYPIPACVLNGRRTNCVIPKENNFKQAGERYRSWESDRQDRYITKWVESLSDPRVTHEIRSIWISYLSQADKSCGQKVASRLTVKPTM 492          
BLAST of CX299925 vs. ExPASy Swiss-Prot
Match: CATA1_SOLTU (Catalase isozyme 1 OS=Solanum tuberosum GN=CAT1 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 1.847e-36
Identity = 69/103 (66.99%), Postives = 82/103 (79.61%), Query Frame = 3
Query:    3 IDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 311
            +DYFPSR+DP R AE +P P  +  GRR  C+IPKENN KQ GERYRSW  DRQ+R+I +WV++LSDPRVTHEIR IWISY SQA KS GQK+ASRL V+P +
Sbjct:  390 VDYFPSRFDPCRPAEQYPIPACVLNGRRTNCVIPKENNSKQAGERYRSWESDRQDRYINKWVESLSDPRVTHEIRSIWISYLSQADKSCGQKVASRLTVKPTM 492          
BLAST of CX299925 vs. ExPASy Swiss-Prot
Match: CATA1_MAIZE (Catalase isozyme 1 OS=Zea mays GN=CAT1 PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 4.114e-36
Identity = 70/103 (67.96%), Postives = 82/103 (79.61%), Query Frame = 3
Query:    3 IDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 311
            ++YFPSR+DP RHAE  P PP +    REKCII KENNFKQ GERYRS+ P RQ+RFI RWVDAL+ PRVTHE R IWISYWSQ   +LGQKL SRLN++P++
Sbjct:  390 VNYFPSRFDPARHAEKVPIPPRVLTRCREKCIIQKENNFKQAGERYRSFDPARQDRFIQRWVDALTHPRVTHEHRTIWISYWSQCDAALGQKLPSRLNLKPSM 492          
BLAST of CX299925 vs. ExPASy Swiss-Prot
Match: CATA1_ORYSJ (Catalase isozyme A OS=Oryza sativa subsp. japonica GN=CATA PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.282e-29
Identity = 59/103 (57.28%), Postives = 79/103 (76.70%), Query Frame = 3
Query:    3 IDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 311
            +DY+PSR+ P+RHA   P  P    GRR+K  I K+N+FKQPGERYRSWAPDRQERFI R+   L+ P+V+ E+R IW++Y SQ  +SLG K+A+RLNV+P++
Sbjct:  390 VDYYPSRHAPLRHAPPTPITPRPVVGRRQKATIHKQNDFKQPGERYRSWAPDRQERFIRRFAGELAHPKVSPELRAIWVNYLSQCDESLGVKIANRLNVKPSM 492          
BLAST of CX299925 vs. ExPASy Swiss-Prot
Match: CATA1_ORYSI (Catalase isozyme A OS=Oryza sativa subsp. indica PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.282e-29
Identity = 59/103 (57.28%), Postives = 79/103 (76.70%), Query Frame = 3
Query:    3 IDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 311
            +DY+PSR+ P+RHA   P  P    GRR+K  I K+N+FKQPGERYRSWAPDRQERFI R+   L+ P+V+ E+R IW++Y SQ  +SLG K+A+RLNV+P++
Sbjct:  390 VDYYPSRHAPLRHAPPTPITPRPVVGRRQKATIHKQNDFKQPGERYRSWAPDRQERFIRRFAGELAHPKVSPELRAIWVNYLSQCDESLGVKIANRLNVKPSM 492          
BLAST of CX299925 vs. ExPASy Swiss-Prot
Match: CATA2_HORVU (Catalase isozyme 2 OS=Hordeum vulgare GN=CAT2 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 2.856e-29
Identity = 60/105 (57.14%), Postives = 80/105 (76.19%), Query Frame = 3
Query:    3 IDYFPSRYDPVRHAE--MHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 311
            +DY+PSR+ P+RHAE    P P     G+REK  I KEN+F QPGERYRSWAPDRQ+RF+ R+ DAL+ P+V+HE+R IWI + S+  KS G K+A+RLNV+P++
Sbjct:  390 VDYYPSRHAPLRHAEPASFPVPTRPVVGKREKTRIKKENDFVQPGERYRSWAPDRQDRFVRRFSDALAHPKVSHELRVIWIDFLSKCDKSCGMKVANRLNVKPSM 494          
BLAST of CX299925 vs. ExPASy Swiss-Prot
Match: CATA_SECCE (Catalase OS=Secale cereale PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.123e-25
Identity = 57/105 (54.29%), Postives = 76/105 (72.38%), Query Frame = 3
Query:    3 IDYFPSRYDPVRHAE--MHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 311
            +DY+PSR+ P+RHAE    P P     G+REK  I KEN+F QPGERYRSWAPDRQ+RF+      L+ P+V+HE+R IWI + S+  KS G K+A+RLNV+P++
Sbjct:  389 VDYYPSRHAPLRHAEPASFPVPTRPVVGKREKTRIKKENDFVQPGERYRSWAPDRQDRFVA-LRRRLAHPKVSHELRVIWIDFLSKCDKSCGMKVANRLNVKPSM 492          
The following BLAST results are available for this feature:
BLAST of CX299925 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
CATA1_SOLLC1.279e-3767.96Catalase isozyme 1 OS=Solanum lycopersicum GN=CAT1... [more]
CATA1_TOBAC2.181e-3766.02Catalase isozyme 1 OS=Nicotiana tabacum GN=CAT-1 P... [more]
CATA2_MAIZE3.721e-3769.90Catalase isozyme 2 OS=Zea mays GN=CAT2 PE=2 SV=3[more]
CATA2_SOLTU6.347e-3766.99Catalase isozyme 2 OS=Solanum tuberosum GN=CAT2 PE... [more]
CATA1_SOLTU1.847e-3666.99Catalase isozyme 1 OS=Solanum tuberosum GN=CAT1 PE... [more]
CATA1_MAIZE4.114e-3667.96Catalase isozyme 1 OS=Zea mays GN=CAT1 PE=2 SV=1[more]
CATA1_ORYSJ1.282e-2957.28Catalase isozyme A OS=Oryza sativa subsp. japonica... [more]
CATA1_ORYSI1.282e-2957.28Catalase isozyme A OS=Oryza sativa subsp. indica P... [more]
CATA2_HORVU2.856e-2957.14Catalase isozyme 2 OS=Hordeum vulgare GN=CAT2 PE=2... [more]
CATA_SECCE1.123e-2554.29Catalase OS=Secale cereale PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC07004A12SK SaltLeaf1 Citrus clementina cDNA clone C07004A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX299925 ID=CX299925; Name=CX299925; organism=Citrus clementina; type=EST; length=522bp
AGATCGATTACTTCCCTTCAAGGTATGATCCTGTCCGTCATGCTGAGATG
CATCCAACTCCTCCTGAAATCTGCGGCGGAAGGCGCGAGAAGTGCATAAT
TCCAAAGGAAAACAACTTCAAACAACCTGGAGAGAGATACCGATCTTGGG
CACCAGACAGGCAAGAGCGATTCATCTGCAGATGGGTTGATGCTTTATCT
GATCCACGCGTCACCCATGAGATCCGCCACATATGGATCTCATACTGGTC
TCAGGCTTGCAAGTCTCTGGGTCAGAAGTTGGCATCTCGTCTGAATGTGA
GGCCTAACATTTAATGGTGATGCGGAGCTGAGTGATTTAGAAAGAGTTAG
CAAGGAGTAAACACAGAGGACGTCAGCAGTTTAAGGAATGCGAATTCGTT
TTCGGGTGGTGTGTTATTTTGTAATACTAAAAAAAACATGTTGGTCCTGT
AATTCATAAACATGATGTTCCTTAAAATAAATGCTGGTTGTACGCTCAAA
ATTTGTATAAAGTACAATCATA
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