CX299937
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_XYLF2 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Xylella fastidiosa (strain M23) GN=clpX PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.449e-26 Identity = 55/95 (57.89%), Postives = 72/95 (75.79%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DLI +GLIPEFVGR P++ +L L E LVK+LTEPKNA+ KQ+K+LF M NV+L F + AL +A+KA + TGARGLR I+E +L + MYE+P Sbjct: 296 DLIKFGLIPEFVGRLPVVATLDELDESALVKILTEPKNAITKQFKKLFEMENVELEFRQDALSAVARKALKRKTGARGLRTIVELVLLDTMYELP 390
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_XANCP (ATP-dependent Clp protease ATP-binding subunit clpX OS=Xanthomonas campestris pv. campestris GN=clpX PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.449e-26 Identity = 56/95 (58.95%), Postives = 72/95 (75.79%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DLI +GLIPEFVGR P++ +L L E L+K+LTEPKNA+ KQ+K+LF M +V+L F AL IAKKA + TGARGLR I+ES+L + MYE+P Sbjct: 296 DLIKFGLIPEFVGRLPVVATLEELDEPALIKILTEPKNAITKQFKKLFEMESVELEFRPDALSAIAKKALKRKTGARGLRTIVESVLLDTMYELP 390
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_XANCB (ATP-dependent Clp protease ATP-binding subunit clpX OS=Xanthomonas campestris pv. campestris (strain B100) GN=clpX PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.449e-26 Identity = 56/95 (58.95%), Postives = 72/95 (75.79%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DLI +GLIPEFVGR P++ +L L E L+K+LTEPKNA+ KQ+K+LF M +V+L F AL IAKKA + TGARGLR I+ES+L + MYE+P Sbjct: 296 DLIKFGLIPEFVGRLPVVATLEELDEPALIKILTEPKNAITKQFKKLFEMESVELEFRPDALSAIAKKALKRKTGARGLRTIVESVLLDTMYELP 390
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_XANC8 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Xanthomonas campestris pv. campestris (strain 8004) GN=clpX PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.449e-26 Identity = 56/95 (58.95%), Postives = 72/95 (75.79%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DLI +GLIPEFVGR P++ +L L E L+K+LTEPKNA+ KQ+K+LF M +V+L F AL IAKKA + TGARGLR I+ES+L + MYE+P Sbjct: 296 DLIKFGLIPEFVGRLPVVATLEELDEPALIKILTEPKNAITKQFKKLFEMESVELEFRPDALSAIAKKALKRKTGARGLRTIVESVLLDTMYELP 390
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_RHILO (ATP-dependent Clp protease ATP-binding subunit clpX OS=Rhizobium loti GN=clpX PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.449e-26 Identity = 57/95 (60.00%), Postives = 73/95 (76.84%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL KQY+RLF M NV L F E AL IAK+A + TGARGLR+I+E+IL + M+E+P Sbjct: 293 DLLKFGLIPEFVGRLPVLATLEDLDEPALIQILTEPKNALVKQYQRLFEMENVDLTFHENALSAIAKRAIERKTGARGLRSIMEAILLDTMFELP 387
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_NEIMF (ATP-dependent Clp protease ATP-binding subunit clpX OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=clpX PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.449e-26 Identity = 56/98 (57.14%), Postives = 73/98 (74.49%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DLI +GLIPE +GR P++ +L L ED L+ +LTEPKNAL KQY+ LF M NV+L F E ALR IA++A + TGARGLR+I+E L + MY +PD+K Sbjct: 293 DLIKFGLIPELIGRLPVIATLEELDEDALINILTEPKNALVKQYQALFGMENVELEFEEGALRSIARQAMERKTGARGLRSIVERCLLDTMYRLPDLK 390
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_NEIMB (ATP-dependent Clp protease ATP-binding subunit clpX OS=Neisseria meningitidis serogroup B GN=clpX PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.449e-26 Identity = 56/98 (57.14%), Postives = 73/98 (74.49%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DLI +GLIPE +GR P++ +L L ED L+ +LTEPKNAL KQY+ LF M NV+L F E ALR IA++A + TGARGLR+I+E L + MY +PD+K Sbjct: 293 DLIKFGLIPELIGRLPVIATLEELDEDALINILTEPKNALVKQYQALFGMENVELEFEEGALRSIARQAMERKTGARGLRSIVERCLLDTMYRLPDLK 390
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_YEREN (ATP-dependent Clp protease ATP-binding subunit clpX OS=Yersinia enterocolitica GN=clpX PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 7.117e-26 Identity = 53/99 (53.54%), Postives = 78/99 (78.79%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVKT 371 DLI +GLIPEF+GR P++ +L+ L+ED L+++L EPKNAL KQY+ LF++ V+L F ++AL IAKKA A+ TGARGLR+I+E L + MY++P +++ Sbjct: 294 DLIKFGLIPEFIGRLPVVATLSELSEDALIQILKEPKNALTKQYQALFNLEGVELEFRDEALTAIAKKAMARKTGARGLRSIVEGALLDTMYDLPSMES 392
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_YERE8 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=clpX PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 7.117e-26 Identity = 53/99 (53.54%), Postives = 78/99 (78.79%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVKT 371 DLI +GLIPEF+GR P++ +L+ L+ED L+++L EPKNAL KQY+ LF++ V+L F ++AL IAKKA A+ TGARGLR+I+E L + MY++P +++ Sbjct: 294 DLIKFGLIPEFIGRLPVVATLSELSEDALIQILKEPKNALTKQYQALFNLEGVELEFRDEALTAIAKKAMARKTGARGLRSIVEGALLDTMYDLPSMES 392
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_XANOR (ATP-dependent Clp protease ATP-binding subunit clpX OS=Xanthomonas oryzae pv. oryzae GN=clpX PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 7.117e-26 Identity = 56/95 (58.95%), Postives = 71/95 (74.74%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DLI +GLIPEFVGR P++ +L L E L+K+LTEPKNA+ KQ+K+LF M V+L F AL IAKKA + TGARGLR I+ES+L + MYE+P Sbjct: 296 DLIKFGLIPEFVGRLPVVATLEELDEPALIKILTEPKNAITKQFKKLFDMEGVELEFRADALSAIAKKALKRKTGARGLRTIVESVLLDTMYELP 390 The following BLAST results are available for this feature:
BLAST of CX299937 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299937 ID=CX299937; Name=CX299937; organism=Citrus clementina; type=EST; length=702bpback to top |