CX299937
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_XANP2 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=clpX PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.071e-25 Identity = 56/98 (57.14%), Postives = 75/98 (76.53%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DL+ YGLIPEF+GR P+L +L L E+ L K+L+EPKNAL KQY+RLF M NV L E+AL IA+KA + TGARGLR+I+ESIL + M+++P ++ Sbjct: 292 DLLKYGLIPEFIGRLPVLATLGDLDEEALKKILSEPKNALVKQYQRLFEMENVDLTIHEEALGAIARKAIERKTGARGLRSIMESILLDTMFDLPGLE 389
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_VIBFM (ATP-dependent Clp protease ATP-binding subunit clpX OS=Vibrio fischeri (strain MJ11) GN=clpX PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.071e-25 Identity = 54/95 (56.84%), Postives = 72/95 (75.79%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +GLIPEF+GR P+ +LT L E+ LV++L++PKNAL KQY LF + +L F E AL+ IAKKA + TGARGLR+ILE++L E MYE+P Sbjct: 298 DLVKFGLIPEFIGRLPVTTTLTELDEEALVQILSQPKNALTKQYGALFDLEGAELEFREDALKAIAKKAMDRKTGARGLRSILEAVLLETMYELP 392
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_VIBF1 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=clpX PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.071e-25 Identity = 54/95 (56.84%), Postives = 72/95 (75.79%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +GLIPEF+GR P+ +LT L E+ LV++L++PKNAL KQY LF + +L F E AL+ IAKKA + TGARGLR+ILE++L E MYE+P Sbjct: 298 DLVKFGLIPEFIGRLPVTTTLTELDEEALVQILSQPKNALTKQYGALFDLEGAELEFREDALKAIAKKAMDRKTGARGLRSILEAVLLETMYELP 392
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_HAHCH (ATP-dependent Clp protease ATP-binding subunit clpX OS=Hahella chejuensis (strain KCTC 2396) GN=clpX PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.071e-25 Identity = 55/95 (57.89%), Postives = 73/95 (76.84%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DLI +GLIPEFVGR P++ +L L E L+++LT+P+NAL KQY +LF M +V++ F E ALR IAKKA + TGARGLR+ILE +L + MY+IP Sbjct: 296 DLIKFGLIPEFVGRLPVIATLDELDEAALIQILTQPRNALTKQYSKLFEMESVEVDFREDALRSIAKKAMERKTGARGLRSILEQVLLKTMYDIP 390
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_COXBR (ATP-dependent Clp protease ATP-binding subunit clpX OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=clpX PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.071e-25 Identity = 56/97 (57.73%), Postives = 72/97 (74.23%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDV 365 DLI YGLIPEFVGR PI+ +L L ED L+++LTEPKNAL KQY++LF V++ F E AL IAK+A + TGARGLR+I+E L + MY++P V Sbjct: 290 DLIKYGLIPEFVGRLPIITTLEELDEDALMRILTEPKNALVKQYRKLFEFEGVEIDFREDALNAIAKRAIQQKTGARGLRSIVEHTLLDLMYDLPGV 386
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_COREF (ATP-dependent Clp protease ATP-binding subunit clpX OS=Corynebacterium efficiens GN=clpX PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.071e-25 Identity = 56/96 (58.33%), Postives = 72/96 (75.00%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPD 362 DL+ +GLIPEF+GR P++ ++ L ++ LVKVLTEP+N+L KQYKRLF M++ L FT+ AL IA A + TGARGLRAILE IL MY+IPD Sbjct: 299 DLVKFGLIPEFIGRLPVVATVANLDQESLVKVLTEPRNSLVKQYKRLFEMDDTLLTFTDDALEAIADLALERKTGARGLRAILEEILVPIMYDIPD 394
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_CLOAB (ATP-dependent Clp protease ATP-binding subunit clpX OS=Clostridium acetobutylicum GN=clpX PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.071e-25 Identity = 57/101 (56.44%), Postives = 80/101 (79.21%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP---DVK 368 DL+ +GLIPEF+GR PI+V+L +L + LVKVL+EPKNAL KQY++L M+NV+L F + AL+ IA +A +++TGARGLRAI+E I+ + M++IP DVK Sbjct: 289 DLLKFGLIPEFIGRLPIIVTLNSLDQGALVKVLSEPKNALVKQYEKLLQMDNVELEFKDGALKAIASEAISRSTGARGLRAIVEDIMKDIMFDIPSREDVK 389
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_ALHEH (ATP-dependent Clp protease ATP-binding subunit clpX OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=clpX PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.071e-25 Identity = 54/98 (55.10%), Postives = 73/98 (74.49%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DL+ YGLIPEFVGR P++ +L L E LV++L+ PKNAL KQY++LF M V+L F E ALR +A+KA + TGARGLR ILE +L + MY++P ++ Sbjct: 294 DLVKYGLIPEFVGRLPVVATLEELDEQALVEILSAPKNALVKQYQKLFEMEGVELEFREDALRAVARKAMDRKTGARGLRTILEHVLLDTMYDLPSME 391
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_SPHAL (ATP-dependent Clp protease ATP-binding subunit clpX OS=Sphingopyxis alaskensis GN=clpX PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.705e-25 Identity = 55/97 (56.70%), Postives = 74/97 (76.29%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDV 365 DL+ +GLIPEFVGR P++ +L L D LVK+L EPKNAL KQYK+LF + V L FT+ AL +AKKA + TGARGLR+I+E+IL + M+++PD+ Sbjct: 292 DLLKFGLIPEFVGRLPVIATLEDLDVDALVKILGEPKNALVKQYKKLFDLEEVALTFTDDALVAVAKKAIERKTGARGLRSIVEAILLDTMFDLPDL 388
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_RHOSR (ATP-dependent Clp protease ATP-binding subunit clpX OS=Rhodococcus sp. (strain RHA1) GN=clpX PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.705e-25 Identity = 55/95 (57.89%), Postives = 72/95 (75.79%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DLI +GLIPEF+GR P++ S+T L ++ LV++L+EPKNAL KQY RLF M+ V+L FT AL IA +A + TGARGLRAI+E +L MY+IP Sbjct: 294 DLIKFGLIPEFIGRLPVVASVTNLDKESLVQILSEPKNALVKQYNRLFDMDGVELEFTTDALEAIADQAILRGTGARGLRAIMEEVLLPVMYDIP 388 The following BLAST results are available for this feature:
BLAST of CX299937 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299937 ID=CX299937; Name=CX299937; organism=Citrus clementina; type=EST; length=702bpback to top |