CX299937
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_VIBCM (ATP-dependent Clp protease ATP-binding subunit clpX OS=Vibrio cholerae serotype O1 (strain M66-2) GN=clpX PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.173e-26 Identity = 56/98 (57.14%), Postives = 72/98 (73.47%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DL+ YGLIPEF+GR P+ +LT L E L+++L EPKNAL KQY LF + NV L F E AL+ IA KA + TGARGLR+ILE++L E MYE+P ++ Sbjct: 296 DLVKYGLIPEFIGRLPVTATLTELDEAALIQILCEPKNALTKQYAALFELENVDLEFREDALKAIAAKAMKRKTGARGLRSILEAVLLETMYELPSME 393
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_VIBCH (ATP-dependent Clp protease ATP-binding subunit clpX OS=Vibrio cholerae GN=clpX PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.173e-26 Identity = 56/98 (57.14%), Postives = 72/98 (73.47%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DL+ YGLIPEF+GR P+ +LT L E L+++L EPKNAL KQY LF + NV L F E AL+ IA KA + TGARGLR+ILE++L E MYE+P ++ Sbjct: 296 DLVKYGLIPEFIGRLPVTATLTELDEAALIQILCEPKNALTKQYAALFELENVDLEFREDALKAIAAKAMKRKTGARGLRSILEAVLLETMYELPSME 393
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_VIBC3 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=clpX PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.173e-26 Identity = 56/98 (57.14%), Postives = 72/98 (73.47%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DL+ YGLIPEF+GR P+ +LT L E L+++L EPKNAL KQY LF + NV L F E AL+ IA KA + TGARGLR+ILE++L E MYE+P ++ Sbjct: 296 DLVKYGLIPEFIGRLPVTATLTELDEAALIQILCEPKNALTKQYAALFELENVDLEFREDALKAIAAKAMKRKTGARGLRSILEAVLLETMYELPSME 393
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_RHORT (ATP-dependent Clp protease ATP-binding subunit clpX OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=clpX PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.173e-26 Identity = 58/98 (59.18%), Postives = 74/98 (75.51%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DL+ YGLIPEFVGR P+L +L L ED LV +LT PKNAL KQY+RLF M + +L F E ALR IA KA A+ TGARGLR+I+E IL + M+++P ++ Sbjct: 291 DLLKYGLIPEFVGRLPVLATLDDLDEDALVDILTTPKNALVKQYQRLFEMESTQLSFKEDALRCIALKAIARKTGARGLRSIMEGILLDTMFDLPGME 388
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_RHOE4 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Rhodococcus erythropolis (strain PR4 / NBRC 100887) GN=clpX PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.173e-26 Identity = 56/95 (58.95%), Postives = 75/95 (78.95%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DLI +GLIPEF+GR P++ S+T L ++ LV++L+EPKNAL KQY+RLF M+ V+L FTE+AL IA +A + TGARGLRAI+E +L MY+IP Sbjct: 294 DLIKFGLIPEFIGRLPMIASVTNLDKESLVQILSEPKNALVKQYRRLFDMDGVELEFTEEALDAIADQAILRGTGARGLRAIMEEVLLPVMYDIP 388
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_PSEPW (ATP-dependent Clp protease ATP-binding subunit clpX OS=Pseudomonas putida (strain W619) GN=clpX PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.173e-26 Identity = 57/98 (58.16%), Postives = 72/98 (73.47%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL KQY RLF M +V L F AL+ +A+KA + TGARGLR+ILE +L + MYEIP K Sbjct: 295 DLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNALTKQYARLFEMESVDLEFRSDALKAVARKALERKTGARGLRSILEGVLLDTMYEIPSQK 392
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_OLICO (ATP-dependent Clp protease ATP-binding subunit clpX OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) GN=clpX PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.173e-26 Identity = 57/98 (58.16%), Postives = 75/98 (76.53%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DL+ YGLIPEFVGR P++ +L L E L K+L EPKNAL KQY+RLF M NV+L F ++AL +A+KA + TGARGLR+ILESIL E M+++P ++ Sbjct: 291 DLLKYGLIPEFVGRLPVVATLEDLDEASLKKILVEPKNALVKQYQRLFEMENVELTFADEALGAVARKAIERKTGARGLRSILESILLETMFDLPGLE 388
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_METSB (ATP-dependent Clp protease ATP-binding subunit clpX OS=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) GN=clpX PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.173e-26 Identity = 55/95 (57.89%), Postives = 74/95 (77.89%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +GLIPEFVGR P++ +L L E+ L K+LTEPKNAL KQY+RLF M N +L F ++AL V+AKKA + TGARGLR+I+E IL + M+++P Sbjct: 291 DLLKFGLIPEFVGRLPVIATLEDLDEEALKKILTEPKNALVKQYQRLFEMENTELSFQDEALNVVAKKAIERRTGARGLRSIMEGILLDTMFDLP 385
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_METS4 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Methylobacterium sp. (strain 4-46) GN=clpX PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.173e-26 Identity = 58/95 (61.05%), Postives = 73/95 (76.84%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +GLIPEFVGR P+L +L L E L ++L EPKNAL KQY+RLF M NV L F E+AL ++A+KA + TGARGLR+ILESIL E MY++P Sbjct: 291 DLLKFGLIPEFVGRLPVLATLEDLDETALKRILQEPKNALVKQYQRLFEMENVDLTFQEEALTLVARKAIERKTGARGLRSILESILLETMYDLP 385
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_EHRCR (ATP-dependent Clp protease ATP-binding subunit clpX OS=Ehrlichia chaffeensis (strain Arkansas) GN=clpX PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.173e-26 Identity = 56/95 (58.95%), Postives = 72/95 (75.79%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +GLIPEFVGR P++ SL L E L ++L EPKN+L KQYK+LF M+N+ L F + AL VIAKKA + TGARGLRAILE++L + M+E P Sbjct: 284 DLVKFGLIPEFVGRIPVITSLGELDESTLCRILVEPKNSLVKQYKKLFEMDNINLQFDDSALSVIAKKAAVRKTGARGLRAILEALLLDLMFESP 378 The following BLAST results are available for this feature:
BLAST of CX299937 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299937 ID=CX299937; Name=CX299937; organism=Citrus clementina; type=EST; length=702bpback to top |